Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

Click here to switch to the map view.

The map label for this gene is 203284051

Identifier: 203284051

GI number: 203284051

Start: 133144

End: 133818

Strand: Reverse

Name: 203284051

Synonym: BDU_129

Alternate gene names: NA

Gene position: 133818-133144 (Counterclockwise)

Preceding gene: 203284052

Following gene: 203284050

Centisome position: 14.36

GC content: 28.15

Gene sequence:

>675_bases
GTGGTTGATAGTAGAGCTTCTAGAGATATTTTGGCTTTTAAATTACCTTATGGGTATTTTGATAAGAGTAGTAATGCTAA
GGTTAGAGGTTTTGATATATATTATAAATTTTATCCGGAAGGTACGAATCATAATTTTAGTGGTTTTGCAAGAAGTGTTC
AAAGAGATTTTGATGCATTAAAGAGTGTTTTTAATAATGTTAGTGCATTTAATTTGAGAGGGTTTTATAAAATAAATTTA
GATCGAGATCGTTTTTCAGGAAGTCCTACCTTAAAATTGGATAAGAGTTGGATTCAAGGTAAATTTCCTTTATATATTGA
ATTAAATTTTGAAAATTTAAGAAAAAGTATTCCTGGTTCAGCGTTTATTACTATAAGGAAGGGTAATGATTCTTCATCTC
CTATTCTTAAAGAGATTAAGAATATGTACAGATCTTATGTTGTTGATGGTTTTTATACTGAATTTTTTGATGTTTTGAAG
AAATCTAAAGTATCAGATAGCAAAGATAGACCATTTGATCTTAAACATATTAGTGATAGCTTTTTTACAAGGGATGTTTC
TCCTAAGTATAATTTAGTGATTTTTGTTATGGCAGCAGGTAATGCTATTGAAGGTGATCTATATAGTGTTATTGTTAATT
TAGGGACTTTAAACAGTTTTGAATTGTCAAATTAG

Upstream 100 bases:

>100_bases
AAATATTCAAGGAGGATTTAGTTATATTATATTTTTAAGTGTATTTTTTTTTATATTTGGTTGTGGAATTGAGGATATCG
CTTTAGTTGATTCTCCTTCT

Downstream 100 bases:

>100_bases
TTGAAGGTAAGGTATGTTAGCATTTTTTCTTCATTTAATTTTAACTAATATTATTATTTCTTTTTTAGTAAGTTTTTTTG
TTGTTTTTTTTGGTATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MVDSRASRDILAFKLPYGYFDKSSNAKVRGFDIYYKFYPEGTNHNFSGFARSVQRDFDALKSVFNNVSAFNLRGFYKINL
DRDRFSGSPTLKLDKSWIQGKFPLYIELNFENLRKSIPGSAFITIRKGNDSSSPILKEIKNMYRSYVVDGFYTEFFDVLK
KSKVSDSKDRPFDLKHISDSFFTRDVSPKYNLVIFVMAAGNAIEGDLYSVIVNLGTLNSFELSN

Sequences:

>Translated_224_residues
MVDSRASRDILAFKLPYGYFDKSSNAKVRGFDIYYKFYPEGTNHNFSGFARSVQRDFDALKSVFNNVSAFNLRGFYKINL
DRDRFSGSPTLKLDKSWIQGKFPLYIELNFENLRKSIPGSAFITIRKGNDSSSPILKEIKNMYRSYVVDGFYTEFFDVLK
KSKVSDSKDRPFDLKHISDSFFTRDVSPKYNLVIFVMAAGNAIEGDLYSVIVNLGTLNSFELSN
>Mature_224_residues
MVDSRASRDILAFKLPYGYFDKSSNAKVRGFDIYYKFYPEGTNHNFSGFARSVQRDFDALKSVFNNVSAFNLRGFYKINL
DRDRFSGSPTLKLDKSWIQGKFPLYIELNFENLRKSIPGSAFITIRKGNDSSSPILKEIKNMYRSYVVDGFYTEFFDVLK
KSKVSDSKDRPFDLKHISDSFFTRDVSPKYNLVIFVMAAGNAIEGDLYSVIVNLGTLNSFELSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25700; Mature: 25700

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSRASRDILAFKLPYGYFDKSSNAKVRGFDIYYKFYPEGTNHNFSGFARSVQRDFDAL
CCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
KSVFNNVSAFNLRGFYKINLDRDRFSGSPTLKLDKSWIQGKFPLYIELNFENLRKSIPGS
HHHHCCCCEEEECEEEEEEECHHHCCCCCCEEECHHHHCCCCCEEEEEEHHHHHHHCCCC
AFITIRKGNDSSSPILKEIKNMYRSYVVDGFYTEFFDVLKKSKVSDSKDRPFDLKHISDS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHH
FFTRDVSPKYNLVIFVMAAGNAIEGDLYSVIVNLGTLNSFELSN
HHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure
MVDSRASRDILAFKLPYGYFDKSSNAKVRGFDIYYKFYPEGTNHNFSGFARSVQRDFDAL
CCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
KSVFNNVSAFNLRGFYKINLDRDRFSGSPTLKLDKSWIQGKFPLYIELNFENLRKSIPGS
HHHHCCCCEEEECEEEEEEECHHHCCCCCCEEECHHHHCCCCCEEEEEEHHHHHHHCCCC
AFITIRKGNDSSSPILKEIKNMYRSYVVDGFYTEFFDVLKKSKVSDSKDRPFDLKHISDS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHH
FFTRDVSPKYNLVIFVMAAGNAIEGDLYSVIVNLGTLNSFELSN
HHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA