| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284007
Identifier: 203284007
GI number: 203284007
Start: 88717
End: 90003
Strand: Reverse
Name: 203284007
Synonym: BDU_85
Alternate gene names: NA
Gene position: 90003-88717 (Counterclockwise)
Preceding gene: 203284008
Following gene: 203283993
Centisome position: 9.66
GC content: 25.95
Gene sequence:
>1287_bases ATGAGTAAAACTTCTGAAGAAAGAATTAAAATTTATTTATCTACTTTATCTAAGCATAAGAATAAAATTTTAAAAGAAAG AAGAATAAAAGAAATTATGGGACGAGCTGATATTTCTGATGCTGATATGGAAAATATTGAAAAGCATTTTTTGAAGATAT ATGATAGAGCTCGACAATTAGAAAGAGCTGGAGATTTTGCTCATTCTTTAAGAGAACTTGATGCTGTGTATTTGTATTCT CTTCATAATAAGTCTCTCTTTACTTTATTTTTTAATCTGTATAAGAGGCTTGTTACGGAAATAAATACTAAAGATACAAA TAAAAAATTAATACATGTAAGTTTGCAGGCTAGAGAGTTTGGAATAATTGATGGAGTTGATTTAAGAGAATATGATGAAT TTTCAAAATTAAAACAGAGGATATTAGTATTATTGTTAAGTTTTATATTAATATCTGTTATTGCATTTATTACATATAGA ACAGTATATCCTTTTATTGATGGTCATGAATATTTTGGTGATTTAGAGAGGGATATCAAAGAGCCTGTAGTTCAAGGCTT GCCTTCAGTTACAAGGGCATCTGATTTAATAGTTGAATCTGCTAATCTTATTGGCAATCCTAATGTTTTATATTATGTTG AAGTTGAAAGTGCTAAGGTATTGGTTTTTGAAGATTCACATACTTATCAGTTAAAAGCAGGAGTTATTTCATCGAAAGAT TCTATTAAAAATATTTCTTATAGTATAACGGTTTATGATGATTTGGGAAAACCTATTTTAAATAAAGTTTTTGAAAAGAA GAGTGATTTCCCCAATAAATGGAATAGGGGAGTATATGTTCCAATTGATTTTGTATATAATGTTTCTAAAGGTATTAGTT CTCATCCTAAAAAAATGGTTCTTGATATACGTTTAATTGAATTTTTTAAAGACGTTAATGATTTCTCTGGTATTAATTTG GAGACAAGTTCATCAATATTAACTTTTAAATATCTTGGTAGTTATTTTCATGAATCTTTTGAAATTTATGAAGTTAATTC TTTAATAGAAGTTTATAATAGTTCAAGTGATGATGTTAAAGATTTAGAAATTGAAATAATTTATGTTACTAAAGATAGTC AAGTTATTAGGTCTTTAAAGAGAAAGTTAATTTCTGAATCCAATTCTTTTCTTAAATCTCGTTCTAGACAAGTTTTTTCA CTAAAAACCATTTTTCCAAAAGAGATTTATGCAAACATTAAAGAGGAATTATCTTCTATTAAAATCATTAATGTATTTGT AAAATAG
Upstream 100 bases:
>100_bases GTAATTTTGATTAATTCTTTTGTTGGAATTTCTATTACAAAAGATACGGCTAAAAATATTGCTTATTGGCTTTTAAAAAA AGTTGATGAACTAGAAGATA
Downstream 100 bases:
>100_bases TATCTATTTTTTTATATGGATTATAGTATTTCTTTTTCTTTAAATTTTGAGATGATGTTCAGAGGAATAAGTGTTGTTGC AATACTAATTAATGTATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSKTSEERIKIYLSTLSKHKNKILKERRIKEIMGRADISDADMENIEKHFLKIYDRARQLERAGDFAHSLRELDAVYLYS LHNKSLFTLFFNLYKRLVTEINTKDTNKKLIHVSLQAREFGIIDGVDLREYDEFSKLKQRILVLLLSFILISVIAFITYR TVYPFIDGHEYFGDLERDIKEPVVQGLPSVTRASDLIVESANLIGNPNVLYYVEVESAKVLVFEDSHTYQLKAGVISSKD SIKNISYSITVYDDLGKPILNKVFEKKSDFPNKWNRGVYVPIDFVYNVSKGISSHPKKMVLDIRLIEFFKDVNDFSGINL ETSSSILTFKYLGSYFHESFEIYEVNSLIEVYNSSSDDVKDLEIEIIYVTKDSQVIRSLKRKLISESNSFLKSRSRQVFS LKTIFPKEIYANIKEELSSIKIINVFVK
Sequences:
>Translated_428_residues MSKTSEERIKIYLSTLSKHKNKILKERRIKEIMGRADISDADMENIEKHFLKIYDRARQLERAGDFAHSLRELDAVYLYS LHNKSLFTLFFNLYKRLVTEINTKDTNKKLIHVSLQAREFGIIDGVDLREYDEFSKLKQRILVLLLSFILISVIAFITYR TVYPFIDGHEYFGDLERDIKEPVVQGLPSVTRASDLIVESANLIGNPNVLYYVEVESAKVLVFEDSHTYQLKAGVISSKD SIKNISYSITVYDDLGKPILNKVFEKKSDFPNKWNRGVYVPIDFVYNVSKGISSHPKKMVLDIRLIEFFKDVNDFSGINL ETSSSILTFKYLGSYFHESFEIYEVNSLIEVYNSSSDDVKDLEIEIIYVTKDSQVIRSLKRKLISESNSFLKSRSRQVFS LKTIFPKEIYANIKEELSSIKIINVFVK >Mature_427_residues SKTSEERIKIYLSTLSKHKNKILKERRIKEIMGRADISDADMENIEKHFLKIYDRARQLERAGDFAHSLRELDAVYLYSL HNKSLFTLFFNLYKRLVTEINTKDTNKKLIHVSLQAREFGIIDGVDLREYDEFSKLKQRILVLLLSFILISVIAFITYRT VYPFIDGHEYFGDLERDIKEPVVQGLPSVTRASDLIVESANLIGNPNVLYYVEVESAKVLVFEDSHTYQLKAGVISSKDS IKNISYSITVYDDLGKPILNKVFEKKSDFPNKWNRGVYVPIDFVYNVSKGISSHPKKMVLDIRLIEFFKDVNDFSGINLE TSSSILTFKYLGSYFHESFEIYEVNSLIEVYNSSSDDVKDLEIEIIYVTKDSQVIRSLKRKLISESNSFLKSRSRQVFSL KTIFPKEIYANIKEELSSIKIINVFVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49649; Mature: 49518
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTSEERIKIYLSTLSKHKNKILKERRIKEIMGRADISDADMENIEKHFLKIYDRARQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ERAGDFAHSLRELDAVYLYSLHNKSLFTLFFNLYKRLVTEINTKDTNKKLIHVSLQAREF HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC GIIDGVDLREYDEFSKLKQRILVLLLSFILISVIAFITYRTVYPFIDGHEYFGDLERDIK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH EPVVQGLPSVTRASDLIVESANLIGNPNVLYYVEVESAKVLVFEDSHTYQLKAGVISSKD HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCEEEEEECCCCCCC SIKNISYSITVYDDLGKPILNKVFEKKSDFPNKWNRGVYVPIDFVYNVSKGISSHPKKMV CCCCEEEEEEEEHHCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHH LDIRLIEFFKDVNDFSGINLETSSSILTFKYLGSYFHESFEIYEVNSLIEVYNSSSDDVK HHHHHHHHHHHHHHCCCCCEECCCCEEHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCE DLEIEIIYVTKDSQVIRSLKRKLISESNSFLKSRSRQVFSLKTIFPKEIYANIKEELSSI EEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCEEEEHHHCHHHHHHHHHHHHHHE KIINVFVK EEEEEEEC >Mature Secondary Structure SKTSEERIKIYLSTLSKHKNKILKERRIKEIMGRADISDADMENIEKHFLKIYDRARQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ERAGDFAHSLRELDAVYLYSLHNKSLFTLFFNLYKRLVTEINTKDTNKKLIHVSLQAREF HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC GIIDGVDLREYDEFSKLKQRILVLLLSFILISVIAFITYRTVYPFIDGHEYFGDLERDIK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH EPVVQGLPSVTRASDLIVESANLIGNPNVLYYVEVESAKVLVFEDSHTYQLKAGVISSKD HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCEEEEEECCCCCCC SIKNISYSITVYDDLGKPILNKVFEKKSDFPNKWNRGVYVPIDFVYNVSKGISSHPKKMV CCCCEEEEEEEEHHCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHH LDIRLIEFFKDVNDFSGINLETSSSILTFKYLGSYFHESFEIYEVNSLIEVYNSSSDDVK HHHHHHHHHHHHHHCCCCCEECCCCEEHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCE DLEIEIIYVTKDSQVIRSLKRKLISESNSFLKSRSRQVFSLKTIFPKEIYANIKEELSSI EEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCEEEEHHHCHHHHHHHHHHHHHHE KIINVFVK EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA