Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095121

Identifier: 20095121

GI number: 20095121

Start: 1687856

End: 1688686

Strand: Direct

Name: 20095121

Synonym: MK1685

Alternate gene names: NA

Gene position: 1687856-1688686 (Clockwise)

Preceding gene: 20095117

Following gene: 20095122

Centisome position: 99.58

GC content: 56.2

Gene sequence:

>831_bases
GTGATCAAAAGAATACTCCCGTGCACTGTGCTGGCCATGATAGTCTGTACCGCGGTAGGACTCCAACCCGCTCATTCGGA
AAAGGCTCCCGTACCGAAACCACCGAAGCTGGAGGAGAAGAAAGAGGAAGAAAAGAAAGAAGAAAAGGAGAGAAAAGAGT
CGACCTTGAAACCGGGCAAGTACAAGGTCGCGGAAGCGGACTTCAAGAACGGGGTCGTGTACTTAAAACCCCTGTACAAG
CCTAAGCCGGTCATCCCAGTGAAGGTCCCTCCACGGGTCATCCGAAAGCTACGTCCCGGCACCGTCGTCGAAGTTCACCA
GCGCGGTAGCAGTACCGTGATCAGAACCGCGAGTGGGACCGCGGAAGGTTCAACGGTAATAACCCGTACCGAGTCCTCCT
CGGGCACGATGGGTCACACGACCTCTTCGAGCGAGGCTCTTCAAACTGGGTCAACATCGTCGTCGACATCGACACCGTCA
CACACTTCGGTGGGTACCTCGGCGGGTGCGGGAACGTACGGGAACACCACCGTGAATGCGAAGGAGAAGACCGTATCGTC
AGAGGGCGGAAAAACGGCGGGATCGTCCAAATCGAAGGAAAGTAAGGGTAAGCGGGAAAAGAAGGAGAAGAACCGAAGCA
GCAAGGAGAAAATAAAGGTGAAAAGGCCGAAGAGTTCCGGATCGTCCGATCTAGAACTACAGCGTGAAGCGAGTAGCGGA
AGCTCGTCAGGATGGGCGCCCTATCTAGTGGCTATCGCCCTGGTAGGAGCGGCCACCGGTGGCATGTGGCTCGTCAAGCA
GCGGAGGTCGACGACGTGGGAGTGGGAGTAA

Upstream 100 bases:

>100_bases
TATACTCGGGAAAGTAGCCCGTAGAATACCCTCTGCCGTGTCCCTTCCACAGCAGTACGTATCTCTCACACCCCCCTCGT
GCGGCGCGGGGTGAACGGTT

Downstream 100 bases:

>100_bases
AGGAACCCACCGGACCGCGAACATTTTGATCTCCGAGTACTGATTTTTCGCACGGGGACCACGCATGTTTGAAGGGACTG
GGTTTGGGTGGGTAGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MIKRILPCTVLAMIVCTAVGLQPAHSEKAPVPKPPKLEEKKEEEKKEEKERKESTLKPGKYKVAEADFKNGVVYLKPLYK
PKPVIPVKVPPRVIRKLRPGTVVEVHQRGSSTVIRTASGTAEGSTVITRTESSSGTMGHTTSSSEALQTGSTSSSTSTPS
HTSVGTSAGAGTYGNTTVNAKEKTVSSEGGKTAGSSKSKESKGKREKKEKNRSSKEKIKVKRPKSSGSSDLELQREASSG
SSSGWAPYLVAIALVGAATGGMWLVKQRRSTTWEWE

Sequences:

>Translated_276_residues
MIKRILPCTVLAMIVCTAVGLQPAHSEKAPVPKPPKLEEKKEEEKKEEKERKESTLKPGKYKVAEADFKNGVVYLKPLYK
PKPVIPVKVPPRVIRKLRPGTVVEVHQRGSSTVIRTASGTAEGSTVITRTESSSGTMGHTTSSSEALQTGSTSSSTSTPS
HTSVGTSAGAGTYGNTTVNAKEKTVSSEGGKTAGSSKSKESKGKREKKEKNRSSKEKIKVKRPKSSGSSDLELQREASSG
SSSGWAPYLVAIALVGAATGGMWLVKQRRSTTWEWE
>Mature_276_residues
MIKRILPCTVLAMIVCTAVGLQPAHSEKAPVPKPPKLEEKKEEEKKEEKERKESTLKPGKYKVAEADFKNGVVYLKPLYK
PKPVIPVKVPPRVIRKLRPGTVVEVHQRGSSTVIRTASGTAEGSTVITRTESSSGTMGHTTSSSEALQTGSTSSSTSTPS
HTSVGTSAGAGTYGNTTVNAKEKTVSSEGGKTAGSSKSKESKGKREKKEKNRSSKEKIKVKRPKSSGSSDLELQREASSG
SSSGWAPYLVAIALVGAATGGMWLVKQRRSTTWEWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29526; Mature: 29526

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRILPCTVLAMIVCTAVGLQPAHSEKAPVPKPPKLEEKKEEEKKEEKERKESTLKPGK
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
YKVAEADFKNGVVYLKPLYKPKPVIPVKVPPRVIRKLRPGTVVEVHQRGSSTVIRTASGT
EEEECCCCCCCEEEEEECCCCCCEEECCCCHHHHHHCCCCCEEEEECCCCCEEEEECCCC
AEGSTVITRTESSSGTMGHTTSSSEALQTGSTSSSTSTPSHTSVGTSAGAGTYGNTTVNA
CCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
KEKTVSSEGGKTAGSSKSKESKGKREKKEKNRSSKEKIKVKRPKSSGSSDLELQREASSG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCEEEECCCCC
SSSGWAPYLVAIALVGAATGGMWLVKQRRSTTWEWE
CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MIKRILPCTVLAMIVCTAVGLQPAHSEKAPVPKPPKLEEKKEEEKKEEKERKESTLKPGK
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
YKVAEADFKNGVVYLKPLYKPKPVIPVKVPPRVIRKLRPGTVVEVHQRGSSTVIRTASGT
EEEECCCCCCCEEEEEECCCCCCEEECCCCHHHHHHCCCCCEEEEECCCCCEEEEECCCC
AEGSTVITRTESSSGTMGHTTSSSEALQTGSTSSSTSTPSHTSVGTSAGAGTYGNTTVNA
CCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
KEKTVSSEGGKTAGSSKSKESKGKREKKEKNRSSKEKIKVKRPKSSGSSDLELQREASSG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCEEEECCCCC
SSSGWAPYLVAIALVGAATGGMWLVKQRRSTTWEWE
CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA