Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is ubiE [C]

Identifier: 20095120

GI number: 20095120

Start: 1687182

End: 1687805

Strand: Reverse

Name: ubiE [C]

Synonym: MK1684

Alternate gene names: 20095120

Gene position: 1687805-1687182 (Counterclockwise)

Preceding gene: 20095123

Following gene: 20095119

Centisome position: 99.58

GC content: 58.17

Gene sequence:

>624_bases
GTGGAAGGGACACGGCAGAGGGTATTCTACGGGCTACTTTCCCGAGTATACGAGCGTTCCCCCCTTTCGCTGCCGAAACA
CCTCGTCAAAGAGATTCTGCGAGATCTTAAAGGATGTTGTCGAGTCCTTGACGTCGGTTGCGCGACCGGTTACCTGACGC
GCAAGCTCGCCGCCGTATGTGACCGAGTCGTGGGTGTGGACATCAACAGGAAGATGGTGGAAGCTTCGCAGTCCCGAAAC
CGGCTACCCAACGTTAAGTTCGTCCGGGCTGACGCTCATAATTTACCTTTCCCGGACGCGTGCTTCGACGGTATCGTCCT
TTCCGAGATACTCCAGCACCTCGACGTGATCAGGGCCCTGAAAGAGGTAGACAGGGTAGCAGCTCGCGGATGTAGGATGG
CCGTGGTACTGCCCGACCCTACGAGCCGAGCGGCCCGCGTGGCTACGAGACTCATCCACGTTTTCACCGGTAACAACGCC
TGGGTATCTCCGGGCACCGTGGTCGGCATCATGAGGGATATGGACTGGAAGCTCGTCAGATTTCAATCGGCCGGTAAGCG
CGTCCTGATAACGATGGAGAAACGGGGTGCGGGAGATGCGGGTCGAAGTGGACCCGGAGGTTAA

Upstream 100 bases:

>100_bases
GTACAGACTATCATGGCCAGCACAGTGCACGGGAGTATTCTTTTGATCACAACCGTTCACCCCGCGCCGCACGAGGGGGG
TGTGAGAGATACGTACTGCT

Downstream 100 bases:

>100_bases
CGATAGGGGACTACGCTACGCGTACGTTAGAGTTGAGGGTGTCGATCCCGGAGCCGACGCCTCGGAGCTCGTTGATCGAG
TTACGGCGAGGTTACGCGAA

Product: SAM-dependent methyltransferase

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: Menaquinone Biosynthesis Methyltransferase-Like Protein; SAM-Dependent Methyltransferase

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MEGTRQRVFYGLLSRVYERSPLSLPKHLVKEILRDLKGCCRVLDVGCATGYLTRKLAAVCDRVVGVDINRKMVEASQSRN
RLPNVKFVRADAHNLPFPDACFDGIVLSEILQHLDVIRALKEVDRVAARGCRMAVVLPDPTSRAARVATRLIHVFTGNNA
WVSPGTVVGIMRDMDWKLVRFQSAGKRVLITMEKRGAGDAGRSGPGG

Sequences:

>Translated_207_residues
MEGTRQRVFYGLLSRVYERSPLSLPKHLVKEILRDLKGCCRVLDVGCATGYLTRKLAAVCDRVVGVDINRKMVEASQSRN
RLPNVKFVRADAHNLPFPDACFDGIVLSEILQHLDVIRALKEVDRVAARGCRMAVVLPDPTSRAARVATRLIHVFTGNNA
WVSPGTVVGIMRDMDWKLVRFQSAGKRVLITMEKRGAGDAGRSGPGG
>Mature_207_residues
MEGTRQRVFYGLLSRVYERSPLSLPKHLVKEILRDLKGCCRVLDVGCATGYLTRKLAAVCDRVVGVDINRKMVEASQSRN
RLPNVKFVRADAHNLPFPDACFDGIVLSEILQHLDVIRALKEVDRVAARGCRMAVVLPDPTSRAARVATRLIHVFTGNNA
WVSPGTVVGIMRDMDWKLVRFQSAGKRVLITMEKRGAGDAGRSGPGG

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 22852; Mature: 22852

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTRQRVFYGLLSRVYERSPLSLPKHLVKEILRDLKGCCRVLDVGCATGYLTRKLAAVC
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRVVGVDINRKMVEASQSRNRLPNVKFVRADAHNLPFPDACFDGIVLSEILQHLDVIRAL
HHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KEVDRVAARGCRMAVVLPDPTSRAARVATRLIHVFTGNNAWVSPGTVVGIMRDMDWKLVR
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCEECCCHHHHHHHCCCHHHHE
FQSAGKRVLITMEKRGAGDAGRSGPGG
ECCCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MEGTRQRVFYGLLSRVYERSPLSLPKHLVKEILRDLKGCCRVLDVGCATGYLTRKLAAVC
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRVVGVDINRKMVEASQSRNRLPNVKFVRADAHNLPFPDACFDGIVLSEILQHLDVIRAL
HHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KEVDRVAARGCRMAVVLPDPTSRAARVATRLIHVFTGNNAWVSPGTVVGIMRDMDWKLVR
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCEECCCHHHHHHHCCCHHHHE
FQSAGKRVLITMEKRGAGDAGRSGPGG
ECCCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA