Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095112

Identifier: 20095112

GI number: 20095112

Start: 1677675

End: 1678118

Strand: Direct

Name: 20095112

Synonym: MK1676

Alternate gene names: NA

Gene position: 1677675-1678118 (Clockwise)

Preceding gene: 20095111

Following gene: 20095113

Centisome position: 98.98

GC content: 57.66

Gene sequence:

>444_bases
ATGCGCGACGAGTCGCGCCTCGACAAGTACGTGATCAAGGAAATACTCCGGATCAACCGGCACCTGCCCCGACGTCGTAA
GACCCTCGAAGAGCTGTTGAGGGAAGAGCGGCCGCACGTGGTTAACCGAGACGGTACCAAGCACTACTTCGACCGGGATG
AGCTGGAACGCCTCGCCGACATATTGCCCCGCTACCTTCACGGTCGCCTCAAGCTCCCGATACTCATCGAACTTGGGTAC
TCGGGAGCAGCGGTGATCCGTGGTAAGGCGGAGGTCCGGGTAGTGTGTGAGGTGCTCGGTGAAGAGTGGCGATTTTCTCA
AGATCGAGTGGAGCTGAACATGCTCGACGTTCGAAAGCTCCGCCGCGAATTCCCCACGGCGACCCAGTACATGTTCAGTA
CCGAGTACATTATGGGGAGGCCGAAAGTTGAGAGAAGAGGATAA

Upstream 100 bases:

>100_bases
AGGTGGAGCAAGTATACTTCGCCGCCGTAAGACACGGTCGAATTCGTAAGGGCGACGTGCTGGGAGTGCTCATACTGATC
GAGCTGAAAGGTGAAGAGTG

Downstream 100 bases:

>100_bases
GCGGAGGCTGATGGTGGCTCTCGTTCGAGTTGCCCCTATCGTGGCAACGGTAACCCTGATCGTGGGTTTTACGGTGTTCG
TGATACTAGTGTTGACGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLADILPRYLHGRLKLPILIELGY
SGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKLRREFPTATQYMFSTEYIMGRPKVERRG

Sequences:

>Translated_147_residues
MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLADILPRYLHGRLKLPILIELGY
SGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKLRREFPTATQYMFSTEYIMGRPKVERRG
>Mature_147_residues
MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLADILPRYLHGRLKLPILIELGY
SGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKLRREFPTATQYMFSTEYIMGRPKVERRG

Specific function: Unknown

COG id: COG2083

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0216 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1676_METKA (Q8TUS7)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614959.1
- GeneID:   1478271
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1676
- NMPDR:   fig|190192.1.peg.1672
- HOGENOM:   HBG460991
- OMA:   RRKLPTT
- ProtClustDB:   PRK04115
- BioCyc:   MKAN190192:MK1676-MONOMER
- HAMAP:   MF_00585
- InterPro:   IPR002746
- PIRSF:   PIRSF005264
- ProDom:   PD016056

Pfam domain/function: PF01886 DUF61

EC number: NA

Molecular weight: Translated: 17718; Mature: 17718

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLAD
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
ILPRYLHGRLKLPILIELGYSGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKL
HHHHHHCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RREFPTATQYMFSTEYIMGRPKVERRG
HHHCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLAD
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
ILPRYLHGRLKLPILIELGYSGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKL
HHHHHHCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RREFPTATQYMFSTEYIMGRPKVERRG
HHHCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014