| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095112
Identifier: 20095112
GI number: 20095112
Start: 1677675
End: 1678118
Strand: Direct
Name: 20095112
Synonym: MK1676
Alternate gene names: NA
Gene position: 1677675-1678118 (Clockwise)
Preceding gene: 20095111
Following gene: 20095113
Centisome position: 98.98
GC content: 57.66
Gene sequence:
>444_bases ATGCGCGACGAGTCGCGCCTCGACAAGTACGTGATCAAGGAAATACTCCGGATCAACCGGCACCTGCCCCGACGTCGTAA GACCCTCGAAGAGCTGTTGAGGGAAGAGCGGCCGCACGTGGTTAACCGAGACGGTACCAAGCACTACTTCGACCGGGATG AGCTGGAACGCCTCGCCGACATATTGCCCCGCTACCTTCACGGTCGCCTCAAGCTCCCGATACTCATCGAACTTGGGTAC TCGGGAGCAGCGGTGATCCGTGGTAAGGCGGAGGTCCGGGTAGTGTGTGAGGTGCTCGGTGAAGAGTGGCGATTTTCTCA AGATCGAGTGGAGCTGAACATGCTCGACGTTCGAAAGCTCCGCCGCGAATTCCCCACGGCGACCCAGTACATGTTCAGTA CCGAGTACATTATGGGGAGGCCGAAAGTTGAGAGAAGAGGATAA
Upstream 100 bases:
>100_bases AGGTGGAGCAAGTATACTTCGCCGCCGTAAGACACGGTCGAATTCGTAAGGGCGACGTGCTGGGAGTGCTCATACTGATC GAGCTGAAAGGTGAAGAGTG
Downstream 100 bases:
>100_bases GCGGAGGCTGATGGTGGCTCTCGTTCGAGTTGCCCCTATCGTGGCAACGGTAACCCTGATCGTGGGTTTTACGGTGTTCG TGATACTAGTGTTGACGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLADILPRYLHGRLKLPILIELGY SGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKLRREFPTATQYMFSTEYIMGRPKVERRG
Sequences:
>Translated_147_residues MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLADILPRYLHGRLKLPILIELGY SGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKLRREFPTATQYMFSTEYIMGRPKVERRG >Mature_147_residues MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLADILPRYLHGRLKLPILIELGY SGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKLRREFPTATQYMFSTEYIMGRPKVERRG
Specific function: Unknown
COG id: COG2083
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0216 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1676_METKA (Q8TUS7)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614959.1 - GeneID: 1478271 - GenomeReviews: AE009439_GR - KEGG: mka:MK1676 - NMPDR: fig|190192.1.peg.1672 - HOGENOM: HBG460991 - OMA: RRKLPTT - ProtClustDB: PRK04115 - BioCyc: MKAN190192:MK1676-MONOMER - HAMAP: MF_00585 - InterPro: IPR002746 - PIRSF: PIRSF005264 - ProDom: PD016056
Pfam domain/function: PF01886 DUF61
EC number: NA
Molecular weight: Translated: 17718; Mature: 17718
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLAD CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH ILPRYLHGRLKLPILIELGYSGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKL HHHHHHCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RREFPTATQYMFSTEYIMGRPKVERRG HHHCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRDESRLDKYVIKEILRINRHLPRRRKTLEELLREERPHVVNRDGTKHYFDRDELERLAD CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH ILPRYLHGRLKLPILIELGYSGAAVIRGKAEVRVVCEVLGEEWRFSQDRVELNMLDVRKL HHHHHHCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RREFPTATQYMFSTEYIMGRPKVERRG HHHCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014