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The map label for this gene is SplB

Identifier: 20095087

GI number: 20095087

Start: 1656406

End: 1657362

Strand: Reverse

Name: SplB

Synonym: MK1651

Alternate gene names: NA

Gene position: 1657362-1656406 (Counterclockwise)

Preceding gene: 20095088

Following gene: 20095086

Centisome position: 97.78

GC content: 60.61

Gene sequence:

>957_bases
ATGAGACGGGAGTTGATCGAAAGGCTCGAGTCACGTCTCGACCGGAGAGAGATCGAGAAAGCCCGCCGAGATTCCCACGC
CCGTCGACGTCCGAGGCCTTGTGGGATCACGGTTCACCCAGGTCATGGGTGTCCCAGGGCCTGTTCCTACTGTTACATAC
CGGAGATGGGGTTCAGATTCGAGCGCGCCCGCCCTTACAGGCTCTCCGGGGAAGGCATGGTCTTGGCCCTGCTATACAAC
CGGGGTTTCGAACCAGGTCGTGAGGGGACGTTCATAGCGGTGGGTAGCGTGACGGATCCGTTCCTCCCGGAGCTTGCGGA
CAAAACGCTCGAGTACCTGAGGACGTTCTCACGGTGGTTAGGTAATCCCACGCAGTTTTCCACGAAGTCCGCGATTGACG
GGGAGGTGGCTGAGTCACTCGCGAGGTTGGAGCTTCCGCTGAACGGTCTCGTCACGATTCTCACACCGGACAGAGAGAAA
GCTTCCAGGCTAGAGCCGCGAGCCCCTAGACCCGAGGAGCGGTTAGAGACGATCACCGAGCTCTCGAAAGCCGGTTTGAC
CGTTGACCTCTTCTTCAGGCCGATACTACCGGGAATAGTCGGCCTTGAAGAGGCGGAAGAACTTTTCCGGATGGCTCGCG
ACGCCGGAGCTCGGGGTGTCGTGGTGGGAGGTTTCCGGGTGAACGAGGGTATACTGAGCAGGCTGAAGCGATCCGGGTTT
GACGTCTCGGAAATAGTTAATAGAGCCAACAGACCGATACCCAAAGGCAGGAAGCAGGTGTACGTGCGTACCGGCGATAT
CAAGGAGCGCCTCCTCAGAATAGCTCGGGAGGTCGGCTTGACCCCCTTCGGCGCCGCGTGTTGCGCGTGCGCGAGCGCCG
CCCAGGTACCGTGCCCGAACCGGTGTTGGGAAGGCCCCTTCTGCACCGAGTGTGGGAATCCCGCCTGTCCCGTGTAG

Upstream 100 bases:

>100_bases
ACGAGAAGCGGGTTATGCGGAGGAGTCTCCTGGGTTCGATGTACTTGACGGTACCGACGTTAGCGTGGTGTACCATGCTA
TGGATTTGGGGCGCGATGAA

Downstream 100 bases:

>100_bases
GGGGAATCTCGAGATGTTCGACCACTTGTTCCGTACGCTGTTCAGGATGATCGATCGCTCGATGGAGGAGGCGATGCATG
AGATGGAGCGAGAGATAGCG

Product: DNA photolyase

Products: NA

Alternate protein names: DNA Photolyase; Radical SAM Domain Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRRELIERLESRLDRREIEKARRDSHARRRPRPCGITVHPGHGCPRACSYCYIPEMGFRFERARPYRLSGEGMVLALLYN
RGFEPGREGTFIAVGSVTDPFLPELADKTLEYLRTFSRWLGNPTQFSTKSAIDGEVAESLARLELPLNGLVTILTPDREK
ASRLEPRAPRPEERLETITELSKAGLTVDLFFRPILPGIVGLEEAEELFRMARDAGARGVVVGGFRVNEGILSRLKRSGF
DVSEIVNRANRPIPKGRKQVYVRTGDIKERLLRIAREVGLTPFGAACCACASAAQVPCPNRCWEGPFCTECGNPACPV

Sequences:

>Translated_318_residues
MRRELIERLESRLDRREIEKARRDSHARRRPRPCGITVHPGHGCPRACSYCYIPEMGFRFERARPYRLSGEGMVLALLYN
RGFEPGREGTFIAVGSVTDPFLPELADKTLEYLRTFSRWLGNPTQFSTKSAIDGEVAESLARLELPLNGLVTILTPDREK
ASRLEPRAPRPEERLETITELSKAGLTVDLFFRPILPGIVGLEEAEELFRMARDAGARGVVVGGFRVNEGILSRLKRSGF
DVSEIVNRANRPIPKGRKQVYVRTGDIKERLLRIAREVGLTPFGAACCACASAAQVPCPNRCWEGPFCTECGNPACPV
>Mature_318_residues
MRRELIERLESRLDRREIEKARRDSHARRRPRPCGITVHPGHGCPRACSYCYIPEMGFRFERARPYRLSGEGMVLALLYN
RGFEPGREGTFIAVGSVTDPFLPELADKTLEYLRTFSRWLGNPTQFSTKSAIDGEVAESLARLELPLNGLVTILTPDREK
ASRLEPRAPRPEERLETITELSKAGLTVDLFFRPILPGIVGLEEAEELFRMARDAGARGVVVGGFRVNEGILSRLKRSGF
DVSEIVNRANRPIPKGRKQVYVRTGDIKERLLRIAREVGLTPFGAACCACASAAQVPCPNRCWEGPFCTECGNPACPV

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35553; Mature: 35553

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRELIERLESRLDRREIEKARRDSHARRRPRPCGITVHPGHGCPRACSYCYIPEMGFRF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCEEECCCCCCCC
ERARPYRLSGEGMVLALLYNRGFEPGREGTFIAVGSVTDPFLPELADKTLEYLRTFSRWL
CCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GNPTQFSTKSAIDGEVAESLARLELPLNGLVTILTPDREKASRLEPRAPRPEERLETITE
CCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHH
LSKAGLTVDLFFRPILPGIVGLEEAEELFRMARDAGARGVVVGGFRVNEGILSRLKRSGF
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECEEECHHHHHHHHHCCC
DVSEIVNRANRPIPKGRKQVYVRTGDIKERLLRIAREVGLTPFGAACCACASAAQVPCPN
CHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
RCWEGPFCTECGNPACPV
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRELIERLESRLDRREIEKARRDSHARRRPRPCGITVHPGHGCPRACSYCYIPEMGFRF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCEEECCCCCCCC
ERARPYRLSGEGMVLALLYNRGFEPGREGTFIAVGSVTDPFLPELADKTLEYLRTFSRWL
CCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GNPTQFSTKSAIDGEVAESLARLELPLNGLVTILTPDREKASRLEPRAPRPEERLETITE
CCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHH
LSKAGLTVDLFFRPILPGIVGLEEAEELFRMARDAGARGVVVGGFRVNEGILSRLKRSGF
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECEEECHHHHHHHHHCCC
DVSEIVNRANRPIPKGRKQVYVRTGDIKERLLRIAREVGLTPFGAACCACASAAQVPCPN
CHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
RCWEGPFCTECGNPACPV
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA