Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095075

Identifier: 20095075

GI number: 20095075

Start: 1639406

End: 1640485

Strand: Direct

Name: 20095075

Synonym: MK1639

Alternate gene names: NA

Gene position: 1639406-1640485 (Clockwise)

Preceding gene: 20095071

Following gene: 20095077

Centisome position: 96.72

GC content: 67.5

Gene sequence:

>1080_bases
GTGGGGTGTCCGGGCTTGTACCTGACGAAGGAGGAGGAGCGGATCCTGGACGGCGAGGAGGGTGAGCTGAAGGCTAAGCT
CATGGAGGTATTGGTGAAGCTCGGGGACGTCTTCGACGCGGAGCGACTCGTGAGGCCCGCCTCGGTGCACGTGTCCGGGG
TGTCGTACGGGACGATCGGCGACGCGGGGCTGAGGTTCCTGAGGAAGGTGGCGGAGGCCGGTCTGAGGGTTTCGGTCCCG
ACGAGCGTGAACCCGTGTGGCATCTGTCTGGACGGTAACCTCCCGGTGGACGAGGAGTTCGAGCGGAAGCAACGCGAGAT
CATGGACGCCCTGGAGTCGTTGGGCGTGGCCTCGGTGTACACGTGCGTACCGTACCAGCAGGGGTTCCAACCGTCGCGCG
GCGACCTCCTGGCGTGGGGGGAGTCCTCCGCCGTCTTCGTGGCGAACACGTACTACGGTGCGCGGGCGAACCGGGAGGGG
GCACCGGCGACGGTCGCGGCGGCGGTCGTGGGGAGGATCCCGGAGTACGGGATGCACCTGGACGAGAACCGGGTGGCGGA
GTACGAGGTGGTCGTGGAGTTCGAGCCGCGGAACGACTTCGAGTGGTCGGCGCTGGGGTACTACCTGGGGGAGGCGCTCG
ACGGGATCCCGGTGCTGAAGTTACCGACGGTTCCCTCGCTGTCGAACGTGAAGTACATGGGAGCCGCGGCGGCGGCCTCG
GGAGCGCTGGCTATGGCCTACATCCCGGGGATCACGCCGGAAGAGCCGCGGATGGACTGTCCCGAGCGAATCGAGGTGGA
GCGGGAGGACGTGTTCGATCTCGTGGAGGAGCGGTTCGGGACGGAGCGTGAGGGGTTCGCGTTCACGGGGTGTCCTCACA
GGCCTGACGGTGAGATCCCGAGGTTCGACGGCTGTGCGATCTGCTGTCCGGCGAACGCGACGCTCGATGGGTACAGGCTC
CGGGGGACGTGCCCCGTGGTCGCGCCGATCGAGGACGTCCACGACGTGGTGTTCACGGACTCGCTGAAGGCCGCCCACTA
CCTGGCGTCACGGGTCGAGGTGAACGTGGGTCCGCTGTGA

Upstream 100 bases:

>100_bases
TTGGGAGATCGTTCGCGGGTTTCGGAGCCCGCACAGACGGCCCAGTCCGAGGGTATAGGTGTAAAGAACCGTCGAGGTCC
GTCCGCGGGAACGGCGATCG

Downstream 100 bases:

>100_bases
TCGGGGAAAATCATAAGTAGGACGACGTCCGGGACGGCTTTGGGTCGGGGCCGTGGGGTAGCCTGGTCTATCCTTCCGGC
TTTGGGGGCCGGAGACCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MGCPGLYLTKEEERILDGEEGELKAKLMEVLVKLGDVFDAERLVRPASVHVSGVSYGTIGDAGLRFLRKVAEAGLRVSVP
TSVNPCGICLDGNLPVDEEFERKQREIMDALESLGVASVYTCVPYQQGFQPSRGDLLAWGESSAVFVANTYYGARANREG
APATVAAAVVGRIPEYGMHLDENRVAEYEVVVEFEPRNDFEWSALGYYLGEALDGIPVLKLPTVPSLSNVKYMGAAAAAS
GALAMAYIPGITPEEPRMDCPERIEVEREDVFDLVEERFGTEREGFAFTGCPHRPDGEIPRFDGCAICCPANATLDGYRL
RGTCPVVAPIEDVHDVVFTDSLKAAHYLASRVEVNVGPL

Sequences:

>Translated_359_residues
MGCPGLYLTKEEERILDGEEGELKAKLMEVLVKLGDVFDAERLVRPASVHVSGVSYGTIGDAGLRFLRKVAEAGLRVSVP
TSVNPCGICLDGNLPVDEEFERKQREIMDALESLGVASVYTCVPYQQGFQPSRGDLLAWGESSAVFVANTYYGARANREG
APATVAAAVVGRIPEYGMHLDENRVAEYEVVVEFEPRNDFEWSALGYYLGEALDGIPVLKLPTVPSLSNVKYMGAAAAAS
GALAMAYIPGITPEEPRMDCPERIEVEREDVFDLVEERFGTEREGFAFTGCPHRPDGEIPRFDGCAICCPANATLDGYRL
RGTCPVVAPIEDVHDVVFTDSLKAAHYLASRVEVNVGPL
>Mature_358_residues
GCPGLYLTKEEERILDGEEGELKAKLMEVLVKLGDVFDAERLVRPASVHVSGVSYGTIGDAGLRFLRKVAEAGLRVSVPT
SVNPCGICLDGNLPVDEEFERKQREIMDALESLGVASVYTCVPYQQGFQPSRGDLLAWGESSAVFVANTYYGARANREGA
PATVAAAVVGRIPEYGMHLDENRVAEYEVVVEFEPRNDFEWSALGYYLGEALDGIPVLKLPTVPSLSNVKYMGAAAAASG
ALAMAYIPGITPEEPRMDCPERIEVEREDVFDLVEERFGTEREGFAFTGCPHRPDGEIPRFDGCAICCPANATLDGYRLR
GTCPVVAPIEDVHDVVFTDSLKAAHYLASRVEVNVGPL

Specific function: Unknown

COG id: COG1679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1313 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007506 [H]

Pfam domain/function: PF04412 DUF521 [H]

EC number: NA

Molecular weight: Translated: 38986; Mature: 38854

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCPGLYLTKEEERILDGEEGELKAKLMEVLVKLGDVFDAERLVRPASVHVSGVSYGTIG
CCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEECCCCCCCC
DAGLRFLRKVAEAGLRVSVPTSVNPCGICLDGNLPVDEEFERKQREIMDALESLGVASVY
HHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHEE
TCVPYQQGFQPSRGDLLAWGESSAVFVANTYYGARANREGAPATVAAAVVGRIPEYGMHL
EECCHHHCCCCCCCCEEEECCCCEEEEEECEECCCCCCCCCCHHHHHHHHHCCCHHCCCC
DENRVAEYEVVVEFEPRNDFEWSALGYYLGEALDGIPVLKLPTVPSLSNVKYMGAAAAAS
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEHHHHHHHC
GALAMAYIPGITPEEPRMDCPERIEVEREDVFDLVEERFGTEREGFAFTGCPHRPDGEIP
CCEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
RFDGCAICCPANATLDGYRLRGTCPVVAPIEDVHDVVFTDSLKAAHYLASRVEVNVGPL
CCCCEEEEECCCCCCCCEEEECCCCEECCHHHHHHHHHCCCHHHHHHHHHHEEEECCCC
>Mature Secondary Structure 
GCPGLYLTKEEERILDGEEGELKAKLMEVLVKLGDVFDAERLVRPASVHVSGVSYGTIG
CCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEECCCCCCCC
DAGLRFLRKVAEAGLRVSVPTSVNPCGICLDGNLPVDEEFERKQREIMDALESLGVASVY
HHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHEE
TCVPYQQGFQPSRGDLLAWGESSAVFVANTYYGARANREGAPATVAAAVVGRIPEYGMHL
EECCHHHCCCCCCCCEEEECCCCEEEEEECEECCCCCCCCCCHHHHHHHHHCCCHHCCCC
DENRVAEYEVVVEFEPRNDFEWSALGYYLGEALDGIPVLKLPTVPSLSNVKYMGAAAAAS
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEHHHHHHHC
GALAMAYIPGITPEEPRMDCPERIEVEREDVFDLVEERFGTEREGFAFTGCPHRPDGEIP
CCEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
RFDGCAICCPANATLDGYRLRGTCPVVAPIEDVHDVVFTDSLKAAHYLASRVEVNVGPL
CCCCEEEEECCCCCCCCEEEECCCCEECCHHHHHHHHHCCCHHHHHHHHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]