| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095069
Identifier: 20095069
GI number: 20095069
Start: 1633814
End: 1634437
Strand: Direct
Name: 20095069
Synonym: MK1633
Alternate gene names: NA
Gene position: 1633814-1634437 (Clockwise)
Preceding gene: 20095068
Following gene: 20095071
Centisome position: 96.39
GC content: 57.53
Gene sequence:
>624_bases TTGGTCCGACCCGTGTCGGTAGGGAAGCACGGCGGTGTATCTGTAGAAGTCCTACACCCGTCGGATCTTCCCCCACAGCT GACTTCACTCTGTAAGATTAAGATCAACGGAGCTAGGGTCATCTCCCGTAGGAGCAATATCGTAGCCTTCCGAGGTAGGC CATCCCTGGAACCGCTCAACGACCTCGACGGTTTCATGTCGATCGCCGCCCGGGAGAGCGAGGTCGTGATGGTCGGTGAT CCGTACCTGCGGGTGCTGGCGGTCGAAGAGGGCGAACGGATCGTCGTAAATACGGATCGTCTCCTCGCCTGTCTCGACTT TGAGACCATAGAACTGAAGAACGACGAGATTACCGTGGTCGAATGCGTAGGACCAGACATCGTGGTTCTCGCGTGTTCGA GCCCCGTAGTAGCGTCGCTGAAGTTGGAAGGGGACACCGCACACGTACAGGCGGGGAGCATCCTGTGCTGGTGGAACATC CACACGGAGAACGTCGGTGACTTCCTCAGGCTCACGGGTCAAGGCCACGTGATGCTGTCCATCACCAAGAAACCGGACGC TACCGAGAAAGGCGCCAGTACCGAAAAAACCACCGCACCGAGGAAAGTCAGCTCTTGGATTTAG
Upstream 100 bases:
>100_bases AGGATGAAGTGTGACCCGCCCGCAGGTGATGATTGTCATCCCGGCTGACCCTCCCGGGCATGATGGGGACCACCCAGCTG AAGGGGGCGTCGTCGTAAAA
Downstream 100 bases:
>100_bases CGGCCCCCGATGGACCCAATCCGCAATAATGTTACGATCCTTGTAACGATTTGAGGTTTGGTGCGGCCGCCGGGATTTGA ACCCGGGCCACGGGCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MVRPVSVGKHGGVSVEVLHPSDLPPQLTSLCKIKINGARVISRRSNIVAFRGRPSLEPLNDLDGFMSIAARESEVVMVGD PYLRVLAVEEGERIVVNTDRLLACLDFETIELKNDEITVVECVGPDIVVLACSSPVVASLKLEGDTAHVQAGSILCWWNI HTENVGDFLRLTGQGHVMLSITKKPDATEKGASTEKTTAPRKVSSWI
Sequences:
>Translated_207_residues MVRPVSVGKHGGVSVEVLHPSDLPPQLTSLCKIKINGARVISRRSNIVAFRGRPSLEPLNDLDGFMSIAARESEVVMVGD PYLRVLAVEEGERIVVNTDRLLACLDFETIELKNDEITVVECVGPDIVVLACSSPVVASLKLEGDTAHVQAGSILCWWNI HTENVGDFLRLTGQGHVMLSITKKPDATEKGASTEKTTAPRKVSSWI >Mature_207_residues MVRPVSVGKHGGVSVEVLHPSDLPPQLTSLCKIKINGARVISRRSNIVAFRGRPSLEPLNDLDGFMSIAARESEVVMVGD PYLRVLAVEEGERIVVNTDRLLACLDFETIELKNDEITVVECVGPDIVVLACSSPVVASLKLEGDTAHVQAGSILCWWNI HTENVGDFLRLTGQGHVMLSITKKPDATEKGASTEKTTAPRKVSSWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22450; Mature: 22450
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPVSVGKHGGVSVEVLHPSDLPPQLTSLCKIKINGARVISRRSNIVAFRGRPSLEPLN CCCCCCCCCCCCEEEEEECCCCCCHHHHEEEEEEECCEEEEECCCCEEEECCCCCCCCCH DLDGFMSIAARESEVVMVGDPYLRVLAVEEGERIVVNTDRLLACLDFETIELKNDEITVV HHHHHHHHHCCCCCEEEECCCEEEEEEECCCCEEEEECCCEEEEECCEEEEECCCCEEEE ECVGPDIVVLACSSPVVASLKLEGDTAHVQAGSILCWWNIHTENVGDFLRLTGQGHVMLS EECCCCEEEEEECCCEEEEEEECCCEEEEEECCEEEEEEECCCCCCCEEEECCCCEEEEE ITKKPDATEKGASTEKTTAPRKVSSWI EECCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MVRPVSVGKHGGVSVEVLHPSDLPPQLTSLCKIKINGARVISRRSNIVAFRGRPSLEPLN CCCCCCCCCCCCEEEEEECCCCCCHHHHEEEEEEECCEEEEECCCCEEEECCCCCCCCCH DLDGFMSIAARESEVVMVGDPYLRVLAVEEGERIVVNTDRLLACLDFETIELKNDEITVV HHHHHHHHHCCCCCEEEECCCEEEEEEECCCCEEEEECCCEEEEECCEEEEECCCCEEEE ECVGPDIVVLACSSPVVASLKLEGDTAHVQAGSILCWWNIHTENVGDFLRLTGQGHVMLS EECCCCEEEEEECCCEEEEEEECCCEEEEEECCEEEEEEECCCCCCCEEEECCCCEEEEE ITKKPDATEKGASTEKTTAPRKVSSWI EECCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA