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The map label for this gene is 20094998

Identifier: 20094998

GI number: 20094998

Start: 1575813

End: 1576907

Strand: Reverse

Name: 20094998

Synonym: MK1562

Alternate gene names: NA

Gene position: 1576907-1575813 (Counterclockwise)

Preceding gene: 20095004

Following gene: 20094995

Centisome position: 93.03

GC content: 56.07

Gene sequence:

>1095_bases
TTGAAGGTCTATATCGTGGGTGCAGGTCCCTCGGGATGTTGGATAGCGCGGCGAGTCCATGAAATGGGATACGACGTTAC
CGTGATTACCCACCCCGAGAACAGGCTGCAATCGGAGCGCTTCGGGCATTATAGAGTTTATTACGGAGAAGGGCTCGGTG
GCTCCGCCAGGTACTCGATGGGTAACTTCTGGTTTTGGGGTCCTGAGGGCCTTCGGAGGCCATTTGAGCGAGTTCTCCGC
GATATGACATGCGAGGTACGCAGAACACCCGACTCGGTCGTGTCAAACCTCGATATTGAGTTCGAAGAGGCCGCTGAGGA
CGTCGGACTTGAGCCAGAGCGTATGCCTAAATCCGTTCATTTCGATCTGTGTGATGGGTGTGGAGAATGCTTAGAGTGTC
CGAGAAATGCGAAGTGGGTTCCACAGGACGAGCTGCCTGAAGGAGTGAGCGTACTGAGAGACAAGTGCATTCAATTGGAG
TTTTCTGGAGGTAAAGCGACCGCTATCGTACTTAGATCCCAAACAGTGGAACTCGAAACCGACGACATCGTTGTATTGTG
CGCGGGTTGTCCCGGCACACCCCGGCTCCTGGAGCGTAGCGGGATAGACGCAGACGGCCCGCTGTTCGTGGACGCTTACA
TCCACGTCGTGTCCGACCTGGAGGCGGAACCCGGCATTCAAATGCCGATAGTCGTCGACATGGACGAGTACATCTTGTCT
CCTCATCGAACTTCGGCCTACGAAGGTAAATACTCGATCATGGTGAAAATTGCGGACGAACTCTCGGGTGACGTCATCGG
CAGGGAGAAACCTATCAGCGTCCGAGAGACCGAACTCTTCGCTGAAGGATGTGCGGTAGCGGGCGAAATCATCTCGAGGA
TGGGAGGTAGAGTACGCGCCGTCACGGAACCTTCGGGCGCGCATCCCGGTGGAACGTTGTCCGATAGGGTCGACGACAGG
TACGCGCTGGAAGGGTACGATAACGTTTACGTCGTTGATGCCAACGTACTGCCCGAGCCGCTGGGCAAACCCCCGGTCGG
CGTTATCCTGGCGATGGCCGAGGATTTCTGCGATAAGCTGAGGAGGAGTGAGTGA

Upstream 100 bases:

>100_bases
CCGGGGGTACGTACCTCCAAGTCGGCAACTCTATCCCCTCATACTGGGAAAGGGAGCTGCTAAAAAGGATCACGTTGACG
CGTGACTATCAGGGCTCGGG

Downstream 100 bases:

>100_bases
CCTCCTTCCCGTCCTCAAGGGTGAGGCTTCCGATGGCGAAGCCGTATGACGTCATCGTAATTGGGGCCGGACCCGCCGGG
CTCTCCGCCGCGATTCATGC

Product: flavoprotein related to choline dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKVYIVGAGPSGCWIARRVHEMGYDVTVITHPENRLQSERFGHYRVYYGEGLGGSARYSMGNFWFWGPEGLRRPFERVLR
DMTCEVRRTPDSVVSNLDIEFEEAAEDVGLEPERMPKSVHFDLCDGCGECLECPRNAKWVPQDELPEGVSVLRDKCIQLE
FSGGKATAIVLRSQTVELETDDIVVLCAGCPGTPRLLERSGIDADGPLFVDAYIHVVSDLEAEPGIQMPIVVDMDEYILS
PHRTSAYEGKYSIMVKIADELSGDVIGREKPISVRETELFAEGCAVAGEIISRMGGRVRAVTEPSGAHPGGTLSDRVDDR
YALEGYDNVYVVDANVLPEPLGKPPVGVILAMAEDFCDKLRRSE

Sequences:

>Translated_364_residues
MKVYIVGAGPSGCWIARRVHEMGYDVTVITHPENRLQSERFGHYRVYYGEGLGGSARYSMGNFWFWGPEGLRRPFERVLR
DMTCEVRRTPDSVVSNLDIEFEEAAEDVGLEPERMPKSVHFDLCDGCGECLECPRNAKWVPQDELPEGVSVLRDKCIQLE
FSGGKATAIVLRSQTVELETDDIVVLCAGCPGTPRLLERSGIDADGPLFVDAYIHVVSDLEAEPGIQMPIVVDMDEYILS
PHRTSAYEGKYSIMVKIADELSGDVIGREKPISVRETELFAEGCAVAGEIISRMGGRVRAVTEPSGAHPGGTLSDRVDDR
YALEGYDNVYVVDANVLPEPLGKPPVGVILAMAEDFCDKLRRSE
>Mature_364_residues
MKVYIVGAGPSGCWIARRVHEMGYDVTVITHPENRLQSERFGHYRVYYGEGLGGSARYSMGNFWFWGPEGLRRPFERVLR
DMTCEVRRTPDSVVSNLDIEFEEAAEDVGLEPERMPKSVHFDLCDGCGECLECPRNAKWVPQDELPEGVSVLRDKCIQLE
FSGGKATAIVLRSQTVELETDDIVVLCAGCPGTPRLLERSGIDADGPLFVDAYIHVVSDLEAEPGIQMPIVVDMDEYILS
PHRTSAYEGKYSIMVKIADELSGDVIGREKPISVRETELFAEGCAVAGEIISRMGGRVRAVTEPSGAHPGGTLSDRVDDR
YALEGYDNVYVVDANVLPEPLGKPPVGVILAMAEDFCDKLRRSE

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR013027 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 40221; Mature: 40221

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYIVGAGPSGCWIARRVHEMGYDVTVITHPENRLQSERFGHYRVYYGEGLGGSARYSM
CEEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCEECC
GNFWFWGPEGLRRPFERVLRDMTCEVRRTPDSVVSNLDIEFEEAAEDVGLEPERMPKSVH
CCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCHHHCCCCCC
FDLCDGCGECLECPRNAKWVPQDELPEGVSVLRDKCIQLEFSGGKATAIVLRSQTVELET
CHHHHCHHHHHHCCCCCCCCCHHCCCHHHHHHHHCEEEEEECCCCEEEEEEECCEEEEEC
DDIVVLCAGCPGTPRLLERSGIDADGPLFVDAYIHVVSDLEAEPGIQMPIVVDMDEYILS
CCEEEEEECCCCCHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEECHHHHCC
PHRTSAYEGKYSIMVKIADELSGDVIGREKPISVRETELFAEGCAVAGEIISRMGGRVRA
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
VTEPSGAHPGGTLSDRVDDRYALEGYDNVYVVDANVLPEPLGKPPVGVILAMAEDFCDKL
EECCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
RRSE
HCCC
>Mature Secondary Structure
MKVYIVGAGPSGCWIARRVHEMGYDVTVITHPENRLQSERFGHYRVYYGEGLGGSARYSM
CEEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCEECC
GNFWFWGPEGLRRPFERVLRDMTCEVRRTPDSVVSNLDIEFEEAAEDVGLEPERMPKSVH
CCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCHHHCCCCCC
FDLCDGCGECLECPRNAKWVPQDELPEGVSVLRDKCIQLEFSGGKATAIVLRSQTVELET
CHHHHCHHHHHHCCCCCCCCCHHCCCHHHHHHHHCEEEEEECCCCEEEEEEECCEEEEEC
DDIVVLCAGCPGTPRLLERSGIDADGPLFVDAYIHVVSDLEAEPGIQMPIVVDMDEYILS
CCEEEEEECCCCCHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEECHHHHCC
PHRTSAYEGKYSIMVKIADELSGDVIGREKPISVRETELFAEGCAVAGEIISRMGGRVRA
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
VTEPSGAHPGGTLSDRVDDRYALEGYDNVYVVDANVLPEPLGKPPVGVILAMAEDFCDKL
EECCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
RRSE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]