Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094979

Identifier: 20094979

GI number: 20094979

Start: 1561292

End: 1562038

Strand: Reverse

Name: 20094979

Synonym: MK1543

Alternate gene names: NA

Gene position: 1562038-1561292 (Counterclockwise)

Preceding gene: 20094980

Following gene: 20094977

Centisome position: 92.16

GC content: 61.71

Gene sequence:

>747_bases
TTGCGCGTGAGCCCGTCAGAAGGAGCTCGAAGAGTTTGGCGAGCGATCAAGACCGAACTGTCGGAGCACGGGCCCGAGCT
CGGCAGGTTGGAGGAAGAGCTGAGCGCGGCCGTACCGGAGGACGCTGAGGTGAAAGAGATCCGAGCGTACGGTTACAGGC
GCTCCGTAGGGATCTTCCGTCGTATCAACAGGTTGTGGATACTGATTCGAGGGGACGAGAGTGTGGCGAAGGACATGGAG
CGGAACCTCATCGACAGGATCGTGGAGGACGTCGAGGACCCGAAGGTCCGCCACAAGCTCAACTGGGCACTAAGAGGGGC
CCTACGTGTGACCACCATAGACGACGTTCGACCGGAGCCCGAGGTGATCCGTAGAGTAACGACGTTGTGTGCGCTCTGCG
GAGCGGCTTCGGTGGTTCTGCTCGGAATAGAAGCGCTCGCGTATCCCAAGCGTGTCGTGAAACTCCTTCCTCCAGCCATC
GCGGTTTCAGGGGCCGCCGGATGCCTGCTGCCGTGGCGTGTCGGCCTCCTGGGACTGGCCGACGACGCGCTCGATCACCC
GAGGAGAGTCACGGTACCCGTGGCCGTTTCTCTGACTCTCCTCGTTTTGGCGGGCCTGGTGTCCTCGTTACTCTTGCCGT
ACCTCGGTACTGGGTTCCTGGGCGTGGTGATCGCAGCGTGTGTGACGGGGTTCGTAGCGGCGCGGTTCGTCGAGCTGATC
AACCGTGAAGTCGTGAAAGTAGAGTGA

Upstream 100 bases:

>100_bases
TGGAAGAGGGCACACCACGCGTCGAGATGGAAACCGAAGTCGGTGGCCGGAGAATAGTGGAAAAGCCCGTCGGAGATCCG
GTACCACGGGTGTGCTGATG

Downstream 100 bases:

>100_bases
GGGAGGTCGGGCCCGACGGCGGTCCTCACCACTCGGTTGGAAAGGTGCTCGTCATCCCTACCTTTCGTACGACTCTCCCG
GCTCCAGGATCACGACTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRVSPSEGARRVWRAIKTELSEHGPELGRLEEELSAAVPEDAEVKEIRAYGYRRSVGIFRRINRLWILIRGDESVAKDME
RNLIDRIVEDVEDPKVRHKLNWALRGALRVTTIDDVRPEPEVIRRVTTLCALCGAASVVLLGIEALAYPKRVVKLLPPAI
AVSGAAGCLLPWRVGLLGLADDALDHPRRVTVPVAVSLTLLVLAGLVSSLLLPYLGTGFLGVVIAACVTGFVAARFVELI
NREVVKVE

Sequences:

>Translated_248_residues
MRVSPSEGARRVWRAIKTELSEHGPELGRLEEELSAAVPEDAEVKEIRAYGYRRSVGIFRRINRLWILIRGDESVAKDME
RNLIDRIVEDVEDPKVRHKLNWALRGALRVTTIDDVRPEPEVIRRVTTLCALCGAASVVLLGIEALAYPKRVVKLLPPAI
AVSGAAGCLLPWRVGLLGLADDALDHPRRVTVPVAVSLTLLVLAGLVSSLLLPYLGTGFLGVVIAACVTGFVAARFVELI
NREVVKVE
>Mature_248_residues
MRVSPSEGARRVWRAIKTELSEHGPELGRLEEELSAAVPEDAEVKEIRAYGYRRSVGIFRRINRLWILIRGDESVAKDME
RNLIDRIVEDVEDPKVRHKLNWALRGALRVTTIDDVRPEPEVIRRVTTLCALCGAASVVLLGIEALAYPKRVVKLLPPAI
AVSGAAGCLLPWRVGLLGLADDALDHPRRVTVPVAVSLTLLVLAGLVSSLLLPYLGTGFLGVVIAACVTGFVAARFVELI
NREVVKVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27190; Mature: 27190

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSPSEGARRVWRAIKTELSEHGPELGRLEEELSAAVPEDAEVKEIRAYGYRRSVGIFR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RINRLWILIRGDESVAKDMERNLIDRIVEDVEDPKVRHKLNWALRGALRVTTIDDVRPEP
HHHHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEHHCCCCCH
EVIRRVTTLCALCGAASVVLLGIEALAYPKRVVKLLPPAIAVSGAAGCLLPWRVGLLGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHH
DDALDHPRRVTVPVAVSLTLLVLAGLVSSLLLPYLGTGFLGVVIAACVTGFVAARFVELI
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NREVVKVE
HHHHHCCC
>Mature Secondary Structure
MRVSPSEGARRVWRAIKTELSEHGPELGRLEEELSAAVPEDAEVKEIRAYGYRRSVGIFR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RINRLWILIRGDESVAKDMERNLIDRIVEDVEDPKVRHKLNWALRGALRVTTIDDVRPEP
HHHHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEHHCCCCCH
EVIRRVTTLCALCGAASVVLLGIEALAYPKRVVKLLPPAIAVSGAAGCLLPWRVGLLGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHH
DDALDHPRRVTVPVAVSLTLLVLAGLVSSLLLPYLGTGFLGVVIAACVTGFVAARFVELI
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NREVVKVE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA