| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is coaD
Identifier: 20094940
GI number: 20094940
Start: 1520450
End: 1520923
Strand: Reverse
Name: coaD
Synonym: MK1504
Alternate gene names: 20094940
Gene position: 1520923-1520450 (Counterclockwise)
Preceding gene: 20094941
Following gene: 20094939
Centisome position: 89.73
GC content: 60.34
Gene sequence:
>474_bases TTGACTCCCTTGGCCAGGTTCCGCAAAGTGGTCGTCGGAGGTACATTCGACAGGTTACACCTGGGTCACCAGCGCCTGTT GTCCGTAGCGCTCGAGCTGGGAGACCGAGTGGTGATAGGTGTCACGACGGACTCCTTCGTCCGTGAGGAGGGGAAGAAAG GGGTCGAACCCTTCGAGGAGAGGGTGCGGGCCGTCCGAAGGTTCGTCGAGGAGAAAGGAGCGTCGGATCGAGTTGAGATC GTTCCGTTGGAGGATCGCTACGGCACGACGCTGGAAGACGACGAGATGGACGCGATCGTCGTGAGTCCGGAGACGGAACC GGTGGCGTTGGAGATCAACGAGCTCAGGAGGAAGCGCGGTTTTCCACCGTTATCCATCGTCGTCATTCCGTTCGTGCTGG ACGGTGACGGTAGGAAGATATCCTCCAGCCGGCTGCGGGGAGAGGTGGATGAAGGTCCGTGTCGGGACGACTAA
Upstream 100 bases:
>100_bases ACCTACGAAGAGCCTCGATCCAGAGAGTACTCCGGGAACTCCGCCATGGCTTCTTGGAGGTAGGTGAAGCGCTGAAGGCC GTATACGACATCTTAGGAGG
Downstream 100 bases:
>100_bases CCCCGTGAAAGTCCGGGCGACGGAGCGTGCATTTCTCAGAACGTTTCCGGACCGTGAGATCACCGTCGAGGCGGTGAGCG TCGACCCAGGGGTACCACCT
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTPLARFRKVVVGGTFDRLHLGHQRLLSVALELGDRVVIGVTTDSFVREEGKKGVEPFEERVRAVRRFVEEKGASDRVEI VPLEDRYGTTLEDDEMDAIVVSPETEPVALEINELRRKRGFPPLSIVVIPFVLDGDGRKISSSRLRGEVDEGPCRDD
Sequences:
>Translated_157_residues MTPLARFRKVVVGGTFDRLHLGHQRLLSVALELGDRVVIGVTTDSFVREEGKKGVEPFEERVRAVRRFVEEKGASDRVEI VPLEDRYGTTLEDDEMDAIVVSPETEPVALEINELRRKRGFPPLSIVVIPFVLDGDGRKISSSRLRGEVDEGPCRDD >Mature_156_residues TPLARFRKVVVGGTFDRLHLGHQRLLSVALELGDRVVIGVTTDSFVREEGKKGVEPFEERVRAVRRFVEEKGASDRVEIV PLEDRYGTTLEDDEMDAIVVSPETEPVALEINELRRKRGFPPLSIVVIPFVLDGDGRKISSSRLRGEVDEGPCRDD
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG1019
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eukaryotic CoaD family
Homologues:
Organism=Homo sapiens, GI110227605, Length=151, Percent_Identity=31.7880794701987, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI110227603, Length=151, Percent_Identity=31.7880794701987, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI110227601, Length=151, Percent_Identity=31.7880794701987, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI205277394, Length=151, Percent_Identity=31.7880794701987, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25143409, Length=145, Percent_Identity=37.9310344827586, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6321716, Length=147, Percent_Identity=34.6938775510204, Blast_Score=85, Evalue=6e-18, Organism=Drosophila melanogaster, GI24658602, Length=149, Percent_Identity=39.5973154362416, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_METKA (Q8TGY4)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614787.1 - ProteinModelPortal: Q8TGY4 - SMR: Q8TGY4 - GeneID: 1478099 - GenomeReviews: AE009439_GR - KEGG: mka:MK1504 - NMPDR: fig|190192.1.peg.1500 - HOGENOM: HBG593121 - OMA: ISTTRIR - ProtClustDB: PRK00777 - BioCyc: MKAN190192:MK1504-MONOMER - BRENDA: 2.7.7.3 - GO: GO:0005737 - HAMAP: MF_00647 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17612; Mature: 17481
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLARFRKVVVGGTFDRLHLGHQRLLSVALELGDRVVIGVTTDSFVREEGKKGVEPFEE CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCHHHH RVRAVRRFVEEKGASDRVEIVPLEDRYGTTLEDDEMDAIVVSPETEPVALEINELRRKRG HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHCC FPPLSIVVIPFVLDGDGRKISSSRLRGEVDEGPCRDD CCCEEEEEEEEEECCCCCEECCHHHCCCCCCCCCCCC >Mature Secondary Structure TPLARFRKVVVGGTFDRLHLGHQRLLSVALELGDRVVIGVTTDSFVREEGKKGVEPFEE CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCHHHH RVRAVRRFVEEKGASDRVEIVPLEDRYGTTLEDDEMDAIVVSPETEPVALEINELRRKRG HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHCC FPPLSIVVIPFVLDGDGRKISSSRLRGEVDEGPCRDD CCCEEEEEEEEEECCCCCEECCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014