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The map label for this gene is ypgQ [H]

Identifier: 20094906

GI number: 20094906

Start: 1494730

End: 1495332

Strand: Direct

Name: ypgQ [H]

Synonym: MK1470

Alternate gene names: 20094906

Gene position: 1494730-1495332 (Clockwise)

Preceding gene: 20094905

Following gene: 20094907

Centisome position: 88.19

GC content: 59.54

Gene sequence:

>603_bases
GTGAAGGTCAACCCGAAATTTCCTTGGGAACGAGAGGTGATCGAATTCGTCCGGACGGAGATGTCCGAGGTTTCACCTTC
CCACGACTTCGAACACGTGAAGCGCGTAGTGGGGCTCTGCGAGTTCATCAGGCGCAAGGAAGGAGGAGATCCGGAGATAC
TCCGCGCGGCCGCCTGGTTACACGATATTGGAAGGCCGGCGGAGGAGCGATCGGGTGAAGACCACGCGGAGGTCAGCGCC
GAAATAGCGGAAGATCTCCTCCCCCGCGTGGGATTTCCCTCGGACAAGCTAGGGGAGGTAACACACGCGATCCGAGCTCA
TCGCTTCTCCACGGGACCCGAGCCGCAGACTTTAGAAGCCAAGATACTTCAGGACGCGGACAACCTCGACGCCCTGGGAG
CCATGGGGATAGCCCGATGTTTCTGCGCGGTCGGAGAGCGGGGGACATCGCTGGAATCCGGTGTGGAGCACTTCCACGAA
AAGCTACTCCGATTACCGGAGTTGATGCACACTGAAACGGCCCGCCGATTGGCGGAGGAGAGAAGGCGAAGGATGGTACT
GTTTCTGGAGTGGCTGGAGAAGGAGTGGCGGATGAGGAGTTAG

Upstream 100 bases:

>100_bases
TTCACATCTGCGCGCACATCCACGAGGCGGCGGGCGAGGACGAGCTCGGTAACACCCGGGTGATCAACCCCGGCCCGGGC
GGTACGGTGGTAGTCGAGCT

Downstream 100 bases:

>100_bases
GGGTCGGCCGACGGGAGGATGGGGATGACGGGGTTTACCCGACGCCTCCGCGACTTTTTTAAGACTATCGAATCCGGCGT
CCGGGGGTGTTCTCGTGGCG

Product: HD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKVNPKFPWEREVIEFVRTEMSEVSPSHDFEHVKRVVGLCEFIRRKEGGDPEILRAAAWLHDIGRPAEERSGEDHAEVSA
EIAEDLLPRVGFPSDKLGEVTHAIRAHRFSTGPEPQTLEAKILQDADNLDALGAMGIARCFCAVGERGTSLESGVEHFHE
KLLRLPELMHTETARRLAEERRRRMVLFLEWLEKEWRMRS

Sequences:

>Translated_200_residues
MKVNPKFPWEREVIEFVRTEMSEVSPSHDFEHVKRVVGLCEFIRRKEGGDPEILRAAAWLHDIGRPAEERSGEDHAEVSA
EIAEDLLPRVGFPSDKLGEVTHAIRAHRFSTGPEPQTLEAKILQDADNLDALGAMGIARCFCAVGERGTSLESGVEHFHE
KLLRLPELMHTETARRLAEERRRRMVLFLEWLEKEWRMRS
>Mature_200_residues
MKVNPKFPWEREVIEFVRTEMSEVSPSHDFEHVKRVVGLCEFIRRKEGGDPEILRAAAWLHDIGRPAEERSGEDHAEVSA
EIAEDLLPRVGFPSDKLGEVTHAIRAHRFSTGPEPQTLEAKILQDADNLDALGAMGIARCFCAVGERGTSLESGVEHFHE
KLLRLPELMHTETARRLAEERRRRMVLFLEWLEKEWRMRS

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=208, Percent_Identity=31.25, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22988; Mature: 22988

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNPKFPWEREVIEFVRTEMSEVSPSHDFEHVKRVVGLCEFIRRKEGGDPEILRAAAWL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
HDIGRPAEERSGEDHAEVSAEIAEDLLPRVGFPSDKLGEVTHAIRAHRFSTGPEPQTLEA
HHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
KILQDADNLDALGAMGIARCFCAVGERGTSLESGVEHFHEKLLRLPELMHTETARRLAEE
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRRMVLFLEWLEKEWRMRS
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVNPKFPWEREVIEFVRTEMSEVSPSHDFEHVKRVVGLCEFIRRKEGGDPEILRAAAWL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
HDIGRPAEERSGEDHAEVSAEIAEDLLPRVGFPSDKLGEVTHAIRAHRFSTGPEPQTLEA
HHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
KILQDADNLDALGAMGIARCFCAVGERGTSLESGVEHFHEKLLRLPELMHTETARRLAEE
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRRMVLFLEWLEKEWRMRS
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]