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The map label for this gene is 20094884

Identifier: 20094884

GI number: 20094884

Start: 1479303

End: 1479695

Strand: Direct

Name: 20094884

Synonym: MK1448

Alternate gene names: NA

Gene position: 1479303-1479695 (Clockwise)

Preceding gene: 20094883

Following gene: 20094885

Centisome position: 87.28

GC content: 59.54

Gene sequence:

>393_bases
GTGACCATCAGAGTCGTGTTGGACGCTAACTTCCTCATGATACCGCATCAGGAAGGGGTGGACGTGTTCTCCGAACTCGA
CCGCCTCTTGGGCTCCTACCGACCCATCGTTCCCCGTCAGGTCCTCGAGGAACTGGAGCGCGTGAAGCGTGCGGCTACCG
GTCGGGACAAGATCGCGGCGCGAGTAGCCCTATCCCTCGTAGACGCTAAAGGGATCGAGGTAGTGGACGTTAAAGGGAGG
GACGGAGACGAGGCAATCTTGAACCTCGCCCGACGGTGGGATCGAGTGTACGTGGGCACCCGAGACAAGGAGCTCAAAAA
GCGCCTGTGGAAACTCGGTGTTCCGGTGATAACGTTGCGTCAGCGCACACACCTGGTGATCGAGCGGGGTTAA

Upstream 100 bases:

>100_bases
ACAACCGGTGTGCGCCGAAGAAGGCGACAGGGTCGCGATAAGCCGTAGGATCCAGCGGTGGCGTCTGATAGGCCACGGTG
TCATCAAAGGGTGAAGGGGC

Downstream 100 bases:

>100_bases
CACCTTGGAAGTACCACCTTCTCCCGTCCTGAGCGATGCCTTAGGGAAGCGCTACGTACTCCGGGGAATCCGTCACATCG
TGGGCCCGGTGCCGATCTGC

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTIRVVLDANFLMIPHQEGVDVFSELDRLLGSYRPIVPRQVLEELERVKRAATGRDKIAARVALSLVDAKGIEVVDVKGR
DGDEAILNLARRWDRVYVGTRDKELKKRLWKLGVPVITLRQRTHLVIERG

Sequences:

>Translated_130_residues
MTIRVVLDANFLMIPHQEGVDVFSELDRLLGSYRPIVPRQVLEELERVKRAATGRDKIAARVALSLVDAKGIEVVDVKGR
DGDEAILNLARRWDRVYVGTRDKELKKRLWKLGVPVITLRQRTHLVIERG
>Mature_129_residues
TIRVVLDANFLMIPHQEGVDVFSELDRLLGSYRPIVPRQVLEELERVKRAATGRDKIAARVALSLVDAKGIEVVDVKGRD
GDEAILNLARRWDRVYVGTRDKELKKRLWKLGVPVITLRQRTHLVIERG

Specific function: Unknown

COG id: COG1412

COG function: function code R; Uncharacterized proteins of PilT N-term./Vapc superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PIN domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006984
- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14864; Mature: 14732

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVVLDANFLMIPHQEGVDVFSELDRLLGSYRPIVPRQVLEELERVKRAATGRDKIAA
CEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
RVALSLVDAKGIEVVDVKGRDGDEAILNLARRWDRVYVGTRDKELKKRLWKLGVPVITLR
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCEEEEC
QRTHLVIERG
CCEEEEEECC
>Mature Secondary Structure 
TIRVVLDANFLMIPHQEGVDVFSELDRLLGSYRPIVPRQVLEELERVKRAATGRDKIAA
EEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
RVALSLVDAKGIEVVDVKGRDGDEAILNLARRWDRVYVGTRDKELKKRLWKLGVPVITLR
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCEEEEC
QRTHLVIERG
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]