| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094863
Identifier: 20094863
GI number: 20094863
Start: 1456817
End: 1457656
Strand: Reverse
Name: 20094863
Synonym: MK1427
Alternate gene names: NA
Gene position: 1457656-1456817 (Counterclockwise)
Preceding gene: 20094867
Following gene: 20094860
Centisome position: 86.0
GC content: 61.55
Gene sequence:
>840_bases GTGACGCGCTTAAGCCTGCCGACGTCACGTCACTGCGAGGGGTGTCCCGGAGCCGAAGGGGAAGGTCCCCACCATCCGAC GCTCGAGCTGACCACATCCTGTCCGTACAAGTGCCCTCACTGCTACGCACGCTACGCGGAGAATGTAGGCGTGGTCGTGA AACCGGGACTGTACGGGGAACCCCAGGGGTGTCTCACGGTCTCCCAGTACGGGGAACCTACGGTCCTCGGGAGGGAGCTG ATCGATGTCCTGGAAATGGTCCGAGAGACCGGACTTTTCGACAGGATAGATCTCCAAACTCGGGGATACAGGCCCGATCT GGCCCCGAAGCTGTCGGAGATCTGTGACCTGGTAATGGTGAGTATCGACGTCACGGATCCCGACGTCCATCGGCGCCTCC ACGGCGTAGGGCCCGAGAGGACGCTGCGGTTCGCCGTGAACACGGACCGCCCCGTGATCCGTTCGCTGTACCTTCCCGGC ATCAACGATGACTTGCCTCAGGGGCTCGCCGACACCGAGATAGAGCCCGCCGAGGTATTCGTACAGCCCCTGATCCCCTT CGGGAAAGCCGTGGAGAACCTCAAACGGATCGGCTTACGGGATCATTACAACGTGGTCGGATCCCTGCTGAATTGGGCCG AGAAGTTCGAAGAGTTCGGGTTCGACGTCAGGTTCCCGGCGTGCTGGGTCGATAGTCTCGAAAGGCTGAAGGAGAGGATG GAAGAGGAGCTGGGGTTCGTCGACCTCCGGAACGTCCGGTATTCCCCGGATCCCGGCACTCCAGCCCCTGAACGACGTTT CACGCCTCTACGCGAGCTGCTCGACGAACTAGTGCGCTAA
Upstream 100 bases:
>100_bases GCCCGCGCGATCCGTTCGATCGCCTCGATCGTCAGAAACCTCGTCGGATTCGGGCCGACTCCGACTACCTGCACCGGAAG CCCCTTGGGGGACCTCGACC
Downstream 100 bases:
>100_bases GTTCACTCGGAGCGCTGTAGCGCTGTAACGGCGGCGTGCACGAACCGTGGCGTCGCTTACTACGGCGTGTTGCGTTCACA CCTCGAGCACATCTTTCACG
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTRLSLPTSRHCEGCPGAEGEGPHHPTLELTTSCPYKCPHCYARYAENVGVVVKPGLYGEPQGCLTVSQYGEPTVLGREL IDVLEMVRETGLFDRIDLQTRGYRPDLAPKLSEICDLVMVSIDVTDPDVHRRLHGVGPERTLRFAVNTDRPVIRSLYLPG INDDLPQGLADTEIEPAEVFVQPLIPFGKAVENLKRIGLRDHYNVVGSLLNWAEKFEEFGFDVRFPACWVDSLERLKERM EEELGFVDLRNVRYSPDPGTPAPERRFTPLRELLDELVR
Sequences:
>Translated_279_residues MTRLSLPTSRHCEGCPGAEGEGPHHPTLELTTSCPYKCPHCYARYAENVGVVVKPGLYGEPQGCLTVSQYGEPTVLGREL IDVLEMVRETGLFDRIDLQTRGYRPDLAPKLSEICDLVMVSIDVTDPDVHRRLHGVGPERTLRFAVNTDRPVIRSLYLPG INDDLPQGLADTEIEPAEVFVQPLIPFGKAVENLKRIGLRDHYNVVGSLLNWAEKFEEFGFDVRFPACWVDSLERLKERM EEELGFVDLRNVRYSPDPGTPAPERRFTPLRELLDELVR >Mature_278_residues TRLSLPTSRHCEGCPGAEGEGPHHPTLELTTSCPYKCPHCYARYAENVGVVVKPGLYGEPQGCLTVSQYGEPTVLGRELI DVLEMVRETGLFDRIDLQTRGYRPDLAPKLSEICDLVMVSIDVTDPDVHRRLHGVGPERTLRFAVNTDRPVIRSLYLPGI NDDLPQGLADTEIEPAEVFVQPLIPFGKAVENLKRIGLRDHYNVVGSLLNWAEKFEEFGFDVRFPACWVDSLERLKERME EELGFVDLRNVRYSPDPGTPAPERRFTPLRELLDELVR
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR000385 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 31523; Mature: 31392
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSLPTSRHCEGCPGAEGEGPHHPTLELTTSCPYKCPHCYARYAENVGVVVKPGLYGE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCC PQGCLTVSQYGEPTVLGRELIDVLEMVRETGLFDRIDLQTRGYRPDLAPKLSEICDLVMV CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHH SIDVTDPDVHRRLHGVGPERTLRFAVNTDRPVIRSLYLPGINDDLPQGLADTEIEPAEVF EECCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHCCCCCCCCCCHHHHH VQPLIPFGKAVENLKRIGLRDHYNVVGSLLNWAEKFEEFGFDVRFPACWVDSLERLKERM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH EEELGFVDLRNVRYSPDPGTPAPERRFTPLRELLDELVR HHHCCCEECCCCEECCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TRLSLPTSRHCEGCPGAEGEGPHHPTLELTTSCPYKCPHCYARYAENVGVVVKPGLYGE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCC PQGCLTVSQYGEPTVLGRELIDVLEMVRETGLFDRIDLQTRGYRPDLAPKLSEICDLVMV CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHH SIDVTDPDVHRRLHGVGPERTLRFAVNTDRPVIRSLYLPGINDDLPQGLADTEIEPAEVF EECCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHCCCCCCCCCCHHHHH VQPLIPFGKAVENLKRIGLRDHYNVVGSLLNWAEKFEEFGFDVRFPACWVDSLERLKERM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH EEELGFVDLRNVRYSPDPGTPAPERRFTPLRELLDELVR HHHCCCEECCCCEECCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]