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The map label for this gene is ocd2 [H]

Identifier: 20094847

GI number: 20094847

Start: 1440119

End: 1441096

Strand: Reverse

Name: ocd2 [H]

Synonym: MK1411

Alternate gene names: 20094847

Gene position: 1441096-1440119 (Counterclockwise)

Preceding gene: 20094849

Following gene: 20094846

Centisome position: 85.02

GC content: 61.35

Gene sequence:

>978_bases
ATGCTGTTCCTTTCGGAAGATCACGTCAGAGCGCTTCTCGACGTGAGAGAAGTCGTCGAACGTGTCGAGGAGACGTTTCG
GATCAAGCCCGAGTGCGAGATGCCACCGAAGACTATCGTACCGCTGGAAGGCGGCGACTTCAGAGTGATGCCCGCTTATC
TGTCAGAGCTGGGTGTGGCAGGCGTCAAAATCGTCAACTCACATCCCGACAATCCCGATCGCGGCTTACCCACGGTCATG
GCGGTCATGTGCTTGATCGAGCCGGAAACGGGGAGGCCACTTTGTCTGGTCAGCGCGACGGAGATCACATCGCTGAGGAC
GGGAGCGGCCGGGGCGGTAGCATCGAAGTACCTAGCCGAAGACGTGCGGACGGTCGGAATCGTCGGTGCGGGAGTACAAG
GGAGGTACCAGCTCCTCACGCATGCGGAGGTCTTCGACCTTGAGGCAGTGTTCGTGTACGACCAGGCACGTGAGGCGGCT
CGAAGGCTCGCCGAATGGGTCGAGCGAGACCTCGGTGTCGACGCCAAGGTACTCGACAATTTGGACTTCTCGGGGCTGGA
CGTCGACGTCGTCTGCACATGCACCCCCGCCACCGAGCCCTACCTAGGCTCTGAGGACGTTCCGGAGGACGTCCACGTGA
ACGCTATCGGTGCGGACGCTCCGGAGAAGCAGGAGGTGAAGACCGAGCTGTTGAAGCGCGCGGTGGTCGTGGTCGACGAC
CGCGAGCAGTGCGTCGAATCGGGAGACGTGAGCCAACCCGTGGAGCGGGGCGAGCTGAACCCGGAGGAACTCATCGAACT
CTCGGATGTGGTGAGGGGAGAGACCGAGGTCGATTCCTCGGAGTTGACCGTGTTCGATTCGACCGGAATCGCCATTCTCG
ACGTGGCCGTCGGGGCGTTGGCGTACGAGCGTGCCAAGAAGACCGACGCGGGGGTGGAGGTAAAGCCGTTCGAATTGCCG
ACGGGAAATTTTAAGTAG

Upstream 100 bases:

>100_bases
CTGATGGAGCGCTATCCCCGAACCACCGCGAACTTTCGAGCAAAGCACTCCGGAAAACGATTTCCAGGCATGATCGAGTC
TTTACGTTACCGGGGCTACC

Downstream 100 bases:

>100_bases
TCACAATCGTGACACTTGACAGCCCAGAGCAGGGGATGGTCCGCGGGTGCTGCGGTCGCTCAGGGAGGCGCTGGAAACCC
TGCGCCGGCACGTCCAAGTC

Product: ornithine cyclodeaminase, mu-crystallin-like protein

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLFLSEDHVRALLDVREVVERVEETFRIKPECEMPPKTIVPLEGGDFRVMPAYLSELGVAGVKIVNSHPDNPDRGLPTVM
AVMCLIEPETGRPLCLVSATEITSLRTGAAGAVASKYLAEDVRTVGIVGAGVQGRYQLLTHAEVFDLEAVFVYDQAREAA
RRLAEWVERDLGVDAKVLDNLDFSGLDVDVVCTCTPATEPYLGSEDVPEDVHVNAIGADAPEKQEVKTELLKRAVVVVDD
REQCVESGDVSQPVERGELNPEELIELSDVVRGETEVDSSELTVFDSTGIAILDVAVGALAYERAKKTDAGVEVKPFELP
TGNFK

Sequences:

>Translated_325_residues
MLFLSEDHVRALLDVREVVERVEETFRIKPECEMPPKTIVPLEGGDFRVMPAYLSELGVAGVKIVNSHPDNPDRGLPTVM
AVMCLIEPETGRPLCLVSATEITSLRTGAAGAVASKYLAEDVRTVGIVGAGVQGRYQLLTHAEVFDLEAVFVYDQAREAA
RRLAEWVERDLGVDAKVLDNLDFSGLDVDVVCTCTPATEPYLGSEDVPEDVHVNAIGADAPEKQEVKTELLKRAVVVVDD
REQCVESGDVSQPVERGELNPEELIELSDVVRGETEVDSSELTVFDSTGIAILDVAVGALAYERAKKTDAGVEVKPFELP
TGNFK
>Mature_325_residues
MLFLSEDHVRALLDVREVVERVEETFRIKPECEMPPKTIVPLEGGDFRVMPAYLSELGVAGVKIVNSHPDNPDRGLPTVM
AVMCLIEPETGRPLCLVSATEITSLRTGAAGAVASKYLAEDVRTVGIVGAGVQGRYQLLTHAEVFDLEAVFVYDQAREAA
RRLAEWVERDLGVDAKVLDNLDFSGLDVDVVCTCTPATEPYLGSEDVPEDVHVNAIGADAPEKQEVKTELLKRAVVVVDD
REQCVESGDVSQPVERGELNPEELIELSDVVRGETEVDSSELTVFDSTGIAILDVAVGALAYERAKKTDAGVEVKPFELP
TGNFK

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=315, Percent_Identity=32.0634920634921, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI62241008, Length=277, Percent_Identity=32.8519855595668, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24642678, Length=342, Percent_Identity=25.7309941520468, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 35305; Mature: 35305

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLSEDHVRALLDVREVVERVEETFRIKPECEMPPKTIVPLEGGDFRVMPAYLSELGVA
CCEECHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCEEEEHHHHHHCCCC
GVKIVNSHPDNPDRGLPTVMAVMCLIEPETGRPLCLVSATEITSLRTGAAGAVASKYLAE
CEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHH
DVRTVGIVGAGVQGRYQLLTHAEVFDLEAVFVYDQAREAARRLAEWVERDLGVDAKVLDN
HHHEEEEEECCCCCCEEEEEHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCC
LDFSGLDVDVVCTCTPATEPYLGSEDVPEDVHVNAIGADAPEKQEVKTELLKRAVVVVDD
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEECC
REQCVESGDVSQPVERGELNPEELIELSDVVRGETEVDSSELTVFDSTGIAILDVAVGAL
HHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEHHHHHHHHH
AYERAKKTDAGVEVKPFELPTGNFK
HHHHHHCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MLFLSEDHVRALLDVREVVERVEETFRIKPECEMPPKTIVPLEGGDFRVMPAYLSELGVA
CCEECHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCEEEEHHHHHHCCCC
GVKIVNSHPDNPDRGLPTVMAVMCLIEPETGRPLCLVSATEITSLRTGAAGAVASKYLAE
CEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHH
DVRTVGIVGAGVQGRYQLLTHAEVFDLEAVFVYDQAREAARRLAEWVERDLGVDAKVLDN
HHHEEEEEECCCCCCEEEEEHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCC
LDFSGLDVDVVCTCTPATEPYLGSEDVPEDVHVNAIGADAPEKQEVKTELLKRAVVVVDD
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEECC
REQCVESGDVSQPVERGELNPEELIELSDVVRGETEVDSSELTVFDSTGIAILDVAVGAL
HHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEHHHHHHHHH
AYERAKKTDAGVEVKPFELPTGNFK
HHHHHHCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]