| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094772
Identifier: 20094772
GI number: 20094772
Start: 1354689
End: 1355963
Strand: Reverse
Name: 20094772
Synonym: MK1336
Alternate gene names: NA
Gene position: 1355963-1354689 (Counterclockwise)
Preceding gene: 20094773
Following gene: 20094771
Centisome position: 80.0
GC content: 66.27
Gene sequence:
>1275_bases TTGATCCCGACCCTCTTGGGATTGCTGCTACTGACGACCCCGGCCCAGGCCGCGGACGTGCCCGCGGACCCGACCCTGGG CGCGGGGAAGGTGGTCGTCCGGTTCACGCCCTCTTCGAGCGGAGAATGGCTCGCTCAAGCGTACTACTCGCCGCCGAGGG GTAAGCTCGCGATCGTGAGCGTGAGTGGTTCGATCGCGGGTTCTCGGGTGGAACTCCGCGATCGGTACGCGGGTGGGCCC CTGCGCGTGAGCGTGGTCGACGTGAGCGAGTACGCGCCCGAACTCTCCCAGGTACTAACCCCCGTGCGCGTGGAGAGGCG CGTTACCCGGGAGGGGAGCACTTACCATGTGACCGTCATCGTGTCGAACGAGGCCGAGCACCCGGTCATGGTTCGGTTAA CCTACTCGAACTGGACGCACCTGGACTTCGGCGATCGCACCCTAGACCAGGACGTGAGCGTGGTACTCGAGGGTGAGAAG CTCGAGCTGGAACCGTTCTCGGTCCGGGATTCTCGCTTCGTGCGCGCGGACCTCGTATGGACGGACGCGGGAGGCTTCCG GTACCCCTACACCAGGCTCGGACCCGGGGACTCGCTCACCCTGCACCTCGACGTGACCGCGGACCGTTCACCCGGGAAGG TTACCGTGACCCGGAGGTTGTTGCTCTCGGACCCGCCCGTGCCCGTGAGCCTGACCGTGAGCGTGCTCAGGCCCGCGAAC TACGGTCTCGACGGGAAGAAAGTCTCCTTCTGGGTGCCCGCGCCCGGTGTAGACTACCTCGTGCGCTACCTCGCTCGCGA GGGTGATCGTCTAGTACCCAAGAGTCTCGAGGGGGAGGGTGAGTACCAGGGTGTAGTCTCGGTCGAGCTCCAGGGCGAGC CGGAGCTCGTGAGCGTGTACTTGAAGCAGCCCGCGAGGATGGTGTTCGAGGTGAGGGATCGGGTCAAGCTCTCCCTCCGC TCGGGCTCGAACGGTTCGAGCCGACTCTGGGTCCGCTGGGCGAGCGAGAGCATCCCCGGCGGTCTCGCGACCGACGTGCG GCTCAAGGGTCGGGCGGGTAGGGTACTCCTCGGGCTGGTGCTCGACTCGACGGGCGAGGCTAACGTCGACGTGAGCGGTG GTACGGTACTCGAACGGGGTACTCTACCGAGTGGGCGAGCGTACGCGATCCTCGACGCGGGTCCGGTGAACGGGGAGAAG GTGGTACGCGTGACCTCCAACGCCCGAGTACTCGACGTACTCTCGAAAGTCGTCGACAACCCGGGGGTGGCCTGA
Upstream 100 bases:
>100_bases AACGCGACTACGGTTTCCCGTCCTAATTTCCCGGATGTAAACCCCGGGGATCGCCGCGTTGATCCACCGTAGCGATACCC GCCCGTCCGGGTGAGCGACG
Downstream 100 bases:
>100_bases TCGCTCCCCCACGCGCTACTCCTCCCGTTACTGCTGCTGTCGGCCGTGCAGTGCGTGCCCGGTCGATGCGAGCCCGACGA CGTCGCCGACGACCTGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MIPTLLGLLLLTTPAQAADVPADPTLGAGKVVVRFTPSSSGEWLAQAYYSPPRGKLAIVSVSGSIAGSRVELRDRYAGGP LRVSVVDVSEYAPELSQVLTPVRVERRVTREGSTYHVTVIVSNEAEHPVMVRLTYSNWTHLDFGDRTLDQDVSVVLEGEK LELEPFSVRDSRFVRADLVWTDAGGFRYPYTRLGPGDSLTLHLDVTADRSPGKVTVTRRLLLSDPPVPVSLTVSVLRPAN YGLDGKKVSFWVPAPGVDYLVRYLAREGDRLVPKSLEGEGEYQGVVSVELQGEPELVSVYLKQPARMVFEVRDRVKLSLR SGSNGSSRLWVRWASESIPGGLATDVRLKGRAGRVLLGLVLDSTGEANVDVSGGTVLERGTLPSGRAYAILDAGPVNGEK VVRVTSNARVLDVLSKVVDNPGVA
Sequences:
>Translated_424_residues MIPTLLGLLLLTTPAQAADVPADPTLGAGKVVVRFTPSSSGEWLAQAYYSPPRGKLAIVSVSGSIAGSRVELRDRYAGGP LRVSVVDVSEYAPELSQVLTPVRVERRVTREGSTYHVTVIVSNEAEHPVMVRLTYSNWTHLDFGDRTLDQDVSVVLEGEK LELEPFSVRDSRFVRADLVWTDAGGFRYPYTRLGPGDSLTLHLDVTADRSPGKVTVTRRLLLSDPPVPVSLTVSVLRPAN YGLDGKKVSFWVPAPGVDYLVRYLAREGDRLVPKSLEGEGEYQGVVSVELQGEPELVSVYLKQPARMVFEVRDRVKLSLR SGSNGSSRLWVRWASESIPGGLATDVRLKGRAGRVLLGLVLDSTGEANVDVSGGTVLERGTLPSGRAYAILDAGPVNGEK VVRVTSNARVLDVLSKVVDNPGVA >Mature_424_residues MIPTLLGLLLLTTPAQAADVPADPTLGAGKVVVRFTPSSSGEWLAQAYYSPPRGKLAIVSVSGSIAGSRVELRDRYAGGP LRVSVVDVSEYAPELSQVLTPVRVERRVTREGSTYHVTVIVSNEAEHPVMVRLTYSNWTHLDFGDRTLDQDVSVVLEGEK LELEPFSVRDSRFVRADLVWTDAGGFRYPYTRLGPGDSLTLHLDVTADRSPGKVTVTRRLLLSDPPVPVSLTVSVLRPAN YGLDGKKVSFWVPAPGVDYLVRYLAREGDRLVPKSLEGEGEYQGVVSVELQGEPELVSVYLKQPARMVFEVRDRVKLSLR SGSNGSSRLWVRWASESIPGGLATDVRLKGRAGRVLLGLVLDSTGEANVDVSGGTVLERGTLPSGRAYAILDAGPVNGEK VVRVTSNARVLDVLSKVVDNPGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45819; Mature: 45819
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTLLGLLLLTTPAQAADVPADPTLGAGKVVVRFTPSSSGEWLAQAYYSPPRGKLAIVS CCHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEE VSGSIAGSRVELRDRYAGGPLRVSVVDVSEYAPELSQVLTPVRVERRVTREGSTYHVTVI ECCCCCCCEEEEEHHCCCCCEEEEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEE VSNEAEHPVMVRLTYSNWTHLDFGDRTLDQDVSVVLEGEKLELEPFSVRDSRFVRADLVW EECCCCCCEEEEEEECCEEEECCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEEEEEEE TDAGGFRYPYTRLGPGDSLTLHLDVTADRSPGKVTVTRRLLLSDPPVPVSLTVSVLRPAN ECCCCCCCCCCEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCC YGLDGKKVSFWVPAPGVDYLVRYLAREGDRLVPKSLEGEGEYQGVVSVELQGEPELVSVY CCCCCCEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEECCCCCEEEEE LKQPARMVFEVRDRVKLSLRSGSNGSSRLWVRWASESIPGGLATDVRLKGRAGRVLLGLV HHCHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEE LDSTGEANVDVSGGTVLERGTLPSGRAYAILDAGPVNGEKVVRVTSNARVLDVLSKVVDN ECCCCCCEEEECCCEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCC PGVA CCCC >Mature Secondary Structure MIPTLLGLLLLTTPAQAADVPADPTLGAGKVVVRFTPSSSGEWLAQAYYSPPRGKLAIVS CCHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEE VSGSIAGSRVELRDRYAGGPLRVSVVDVSEYAPELSQVLTPVRVERRVTREGSTYHVTVI ECCCCCCCEEEEEHHCCCCCEEEEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEE VSNEAEHPVMVRLTYSNWTHLDFGDRTLDQDVSVVLEGEKLELEPFSVRDSRFVRADLVW EECCCCCCEEEEEEECCEEEECCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEEEEEEE TDAGGFRYPYTRLGPGDSLTLHLDVTADRSPGKVTVTRRLLLSDPPVPVSLTVSVLRPAN ECCCCCCCCCCEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCC YGLDGKKVSFWVPAPGVDYLVRYLAREGDRLVPKSLEGEGEYQGVVSVELQGEPELVSVY CCCCCCEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEECCCCCEEEEE LKQPARMVFEVRDRVKLSLRSGSNGSSRLWVRWASESIPGGLATDVRLKGRAGRVLLGLV HHCHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEE LDSTGEANVDVSGGTVLERGTLPSGRAYAILDAGPVNGEKVVRVTSNARVLDVLSKVVDN ECCCCCCEEEECCCEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCC PGVA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA