| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094768
Identifier: 20094768
GI number: 20094768
Start: 1351003
End: 1351692
Strand: Direct
Name: 20094768
Synonym: MK1332
Alternate gene names: NA
Gene position: 1351003-1351692 (Clockwise)
Preceding gene: 20094763
Following gene: 20094769
Centisome position: 79.71
GC content: 61.88
Gene sequence:
>690_bases GTGGGGGGAAGGGTCGAATGGTGGCCGGAGCCTCCGAGTGGCGGAAGACGTGCGAGGGAGTCCGGTCCCGCGATAGGAAG ATCGGTCCTGTTACTCGCGATCCCGCTGCTCTTGATGGTGTCTCCCGTCTCGGGTGTCACTGTTTACGTTCCGGACGTCG TCGATGGTGCGTTCTCGTTGGAGAAGGAGGGGTTGGAGCACGCTACTCCGGTGGTCACGAGCGGGCCCGTCGAACGCTTC AACACGTTCGAGAACATGGTCGTCGATTACGAGTACGTATCGGTTTCCGATAATCACGACCTCGTCGTTTGCAGTAACCC GTTCGACGAGATCGACGTGAGGATCACCCCGGAGGGAATCCGCGTCGAGTACCAGACGTCTCGTGGGACCGTCCGACGCT CGCTGTCCTTCAACCCCGAGCACACGTACCTCGTACTCGGACTCCAGGGCCTCCGCACGATCCCCGTCGAACCCCAGCAG GGAGGCGGCGAGTTACCCGTACTCATCATCCACGATCACAGGGTCTACGAGCCCACCACGTACTTCCCATCCCCCATCCT CGGGCGCTACGCCCGGGACGTCACCCCACTCGCTCAGGCCGTCGAACTCATGGGAGGCTACGACCTCCTTGTCAGGCTAG AGGTCGATGGTAGCACCGTGGCCTTCGATCTCGTGAAATCCGACGGGTAG
Upstream 100 bases:
>100_bases GTCGGTCCCTCGTGCGTGCGGTCGCGTTCTCGGTACTGACTACACACTCCGGCTCGTTCCTCACCCCGTAGAGTAGGGTC GAGAGACTCGCCCCGACACT
Downstream 100 bases:
>100_bases GGCGCCTACCGGGTCGTCTGCGATTTGAACACCGGGAAGGCATGGCGCGAGTCCCTACCACCCGAGGAAGCTCGGAAGCT CCTCGACCTGGCCCGGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MGGRVEWWPEPPSGGRRARESGPAIGRSVLLLAIPLLLMVSPVSGVTVYVPDVVDGAFSLEKEGLEHATPVVTSGPVERF NTFENMVVDYEYVSVSDNHDLVVCSNPFDEIDVRITPEGIRVEYQTSRGTVRRSLSFNPEHTYLVLGLQGLRTIPVEPQQ GGGELPVLIIHDHRVYEPTTYFPSPILGRYARDVTPLAQAVELMGGYDLLVRLEVDGSTVAFDLVKSDG
Sequences:
>Translated_229_residues MGGRVEWWPEPPSGGRRARESGPAIGRSVLLLAIPLLLMVSPVSGVTVYVPDVVDGAFSLEKEGLEHATPVVTSGPVERF NTFENMVVDYEYVSVSDNHDLVVCSNPFDEIDVRITPEGIRVEYQTSRGTVRRSLSFNPEHTYLVLGLQGLRTIPVEPQQ GGGELPVLIIHDHRVYEPTTYFPSPILGRYARDVTPLAQAVELMGGYDLLVRLEVDGSTVAFDLVKSDG >Mature_228_residues GGRVEWWPEPPSGGRRARESGPAIGRSVLLLAIPLLLMVSPVSGVTVYVPDVVDGAFSLEKEGLEHATPVVTSGPVERFN TFENMVVDYEYVSVSDNHDLVVCSNPFDEIDVRITPEGIRVEYQTSRGTVRRSLSFNPEHTYLVLGLQGLRTIPVEPQQG GGELPVLIIHDHRVYEPTTYFPSPILGRYARDVTPLAQAVELMGGYDLLVRLEVDGSTVAFDLVKSDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25132; Mature: 25001
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRVEWWPEPPSGGRRARESGPAIGRSVLLLAIPLLLMVSPVSGVTVYVPDVVDGAFSL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH EKEGLEHATPVVTSGPVERFNTFENMVVDYEYVSVSDNHDLVVCSNPFDEIDVRITPEGI HHCCCCCCCCEEECCCHHHHHHHHHEEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCE RVEYQTSRGTVRRSLSFNPEHTYLVLGLQGLRTIPVEPQQGGGELPVLIIHDHRVYEPTT EEEEECCCCEEEEECCCCCCCEEEEEEECCCEECCCCCCCCCCCCCEEEEECCEEECCCC YFPSPILGRYARDVTPLAQAVELMGGYDLLVRLEVDGSTVAFDLVKSDG CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCC >Mature Secondary Structure GGRVEWWPEPPSGGRRARESGPAIGRSVLLLAIPLLLMVSPVSGVTVYVPDVVDGAFSL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH EKEGLEHATPVVTSGPVERFNTFENMVVDYEYVSVSDNHDLVVCSNPFDEIDVRITPEGI HHCCCCCCCCEEECCCHHHHHHHHHEEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCE RVEYQTSRGTVRRSLSFNPEHTYLVLGLQGLRTIPVEPQQGGGELPVLIIHDHRVYEPTT EEEEECCCCEEEEECCCCCCCEEEEEEECCCEECCCCCCCCCCCCCEEEEECCEEECCCC YFPSPILGRYARDVTPLAQAVELMGGYDLLVRLEVDGSTVAFDLVKSDG CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA