| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094765
Identifier: 20094765
GI number: 20094765
Start: 1345608
End: 1346639
Strand: Reverse
Name: 20094765
Synonym: MK1329
Alternate gene names: NA
Gene position: 1346639-1345608 (Counterclockwise)
Preceding gene: 20094766
Following gene: 20094764
Centisome position: 79.45
GC content: 68.02
Gene sequence:
>1032_bases GTGGCGGTGGACCGTGACCTCTGTCCGGACGCCGACCTGAGGAAGGTCGTCGAGGCGTTGGGGTTCTTCTTCGACCCTGT CCGCGCCGTCGGCCTGGCCCTGAACCTCCGTGGACACATGTGCTTCGTCGACGGGCCGGGGGCGGGCAAGACCACGTTCC TCGACGCCTTCAGCGTCGCCGTGGTGTCCGGGGAGGGCGTGACCCGAGAGGCGATGGTGTGGGACGAGCGCACCGACCGT CCGGGCGTCGTGCTGCACTACCCCGCCGGGTTCGTCGGATGGGACGAGTGCGATTCCATCGGCTCGCCGGAGGTCCGGAA GCTCGTCCTCGAGGTCCTCGACTTCAGGCTGGAGGTGGTGGCGCACGGGGAGCTACGTACGGTCAGGCACAACCGCCGGT TCCTGTTCGCGGGGCGCGCCGTCCCGGCGTTCCCCGAGGTGGATCTGATCCGGTTCCTGGGCCGTATGCAGTACATCGGT GGGGTAGGTGGCGACATCCGGGATCGGGTCCTCAGCGGCGCCGTGGATCCCCGCGCCGTCGAGGCGCTGTACGAGCGGAT CTCCTGGGACGTCCAGGCCGTGCACCTGGCCGGATGCGCCGCGGAGGGACCGTTCGTTTCCGGCGAGTTTGCCGAGGAGA TCTTCAGGGGGTACCTCCGCGAGCTCCGCGAGGCGTTCGCGGCGGCTCTCCTGGAGGCGGCTAAACGGTTCCCGATCGGG GCGGGTGCCGGACTCGCCCGGAAGATCGCGATGGCCTACGTCCAGGACAAGATCAACAGGTTCGCGGACACCGTGATTGC GTTCGGCGGTCCGGAGGCCGTCGCCGACGTGGTCCGGGAGTACTACGCCCTCTGCGACCTGGAAGCCCCGGAGGATGACG TCGAGTGCCTCGTGCACGCGTGGGTGAACGCGCTGATGAACAACTACTCCCAGTGGTGCGCCGAGGGCAAGATCCCGGGA CCGAAGATCGCCTACGAGACGATAGCGTCCGAGGACGACCTCGATCTGAGGTTCGAGGACGTGGTGGGTTAA
Upstream 100 bases:
>100_bases ATCCTGCCCCCGACCTCATCCACTTTTCGACACGGTACCCCAGCACCCACGGTGACTCGTCGCACGTCTCTACGGACGAC GAACACGTTGAAACGGGGTC
Downstream 100 bases:
>100_bases GAGGGGGACACCCCAAACCATATGGCGTGGTCGGGATCGGTGTCCCGGGGAGTGGGTGTCGTGGAGTCCACCGAGGTGCC CATCTTCCGCGATCAGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAVDRDLCPDADLRKVVEALGFFFDPVRAVGLALNLRGHMCFVDGPGAGKTTFLDAFSVAVVSGEGVTREAMVWDERTDR PGVVLHYPAGFVGWDECDSIGSPEVRKLVLEVLDFRLEVVAHGELRTVRHNRRFLFAGRAVPAFPEVDLIRFLGRMQYIG GVGGDIRDRVLSGAVDPRAVEALYERISWDVQAVHLAGCAAEGPFVSGEFAEEIFRGYLRELREAFAAALLEAAKRFPIG AGAGLARKIAMAYVQDKINRFADTVIAFGGPEAVADVVREYYALCDLEAPEDDVECLVHAWVNALMNNYSQWCAEGKIPG PKIAYETIASEDDLDLRFEDVVG
Sequences:
>Translated_343_residues MAVDRDLCPDADLRKVVEALGFFFDPVRAVGLALNLRGHMCFVDGPGAGKTTFLDAFSVAVVSGEGVTREAMVWDERTDR PGVVLHYPAGFVGWDECDSIGSPEVRKLVLEVLDFRLEVVAHGELRTVRHNRRFLFAGRAVPAFPEVDLIRFLGRMQYIG GVGGDIRDRVLSGAVDPRAVEALYERISWDVQAVHLAGCAAEGPFVSGEFAEEIFRGYLRELREAFAAALLEAAKRFPIG AGAGLARKIAMAYVQDKINRFADTVIAFGGPEAVADVVREYYALCDLEAPEDDVECLVHAWVNALMNNYSQWCAEGKIPG PKIAYETIASEDDLDLRFEDVVG >Mature_342_residues AVDRDLCPDADLRKVVEALGFFFDPVRAVGLALNLRGHMCFVDGPGAGKTTFLDAFSVAVVSGEGVTREAMVWDERTDRP GVVLHYPAGFVGWDECDSIGSPEVRKLVLEVLDFRLEVVAHGELRTVRHNRRFLFAGRAVPAFPEVDLIRFLGRMQYIGG VGGDIRDRVLSGAVDPRAVEALYERISWDVQAVHLAGCAAEGPFVSGEFAEEIFRGYLRELREAFAAALLEAAKRFPIGA GAGLARKIAMAYVQDKINRFADTVIAFGGPEAVADVVREYYALCDLEAPEDDVECLVHAWVNALMNNYSQWCAEGKIPGP KIAYETIASEDDLDLRFEDVVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37645; Mature: 37514
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDRDLCPDADLRKVVEALGFFFDPVRAVGLALNLRGHMCFVDGPGAGKTTFLDAFSVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHEE VVSGEGVTREAMVWDERTDRPGVVLHYPAGFVGWDECDSIGSPEVRKLVLEVLDFRLEVV EECCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHH AHGELRTVRHNRRFLFAGRAVPAFPEVDLIRFLGRMQYIGGVGGDIRDRVLSGAVDPRAV CCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHH EALYERISWDVQAVHLAGCAAEGPFVSGEFAEEIFRGYLRELREAFAAALLEAAKRFPIG HHHHHHHCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGAGLARKIAMAYVQDKINRFADTVIAFGGPEAVADVVREYYALCDLEAPEDDVECLVHA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH WVNALMNNYSQWCAEGKIPGPKIAYETIASEDDLDLRFEDVVG HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEHHHHCC >Mature Secondary Structure AVDRDLCPDADLRKVVEALGFFFDPVRAVGLALNLRGHMCFVDGPGAGKTTFLDAFSVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHEE VVSGEGVTREAMVWDERTDRPGVVLHYPAGFVGWDECDSIGSPEVRKLVLEVLDFRLEVV EECCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHH AHGELRTVRHNRRFLFAGRAVPAFPEVDLIRFLGRMQYIGGVGGDIRDRVLSGAVDPRAV CCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHH EALYERISWDVQAVHLAGCAAEGPFVSGEFAEEIFRGYLRELREAFAAALLEAAKRFPIG HHHHHHHCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGAGLARKIAMAYVQDKINRFADTVIAFGGPEAVADVVREYYALCDLEAPEDDVECLVHA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH WVNALMNNYSQWCAEGKIPGPKIAYETIASEDDLDLRFEDVVG HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA