| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094754
Identifier: 20094754
GI number: 20094754
Start: 1336699
End: 1338027
Strand: Direct
Name: 20094754
Synonym: MK1318
Alternate gene names: NA
Gene position: 1336699-1338027 (Clockwise)
Preceding gene: 20094753
Following gene: 20094755
Centisome position: 78.86
GC content: 68.92
Gene sequence:
>1329_bases TTGACCGTCCTGCTGGTCCGGAACGTGGGCGTGAACGACGTCCGGGTGGACGGCGAACGGGTGAACGAGCCGTACTACGT GCTCAAGGAGCTGGTCGAGTCGGGCGACCTCGACGGCGTGTCCTTCCCGATCCTAGAACGGGTGCTGGAGGAGCTGGAGC CCGACCGGATCGTCCTCTTCGCGACGGACCAGGATCCGGGATCGACCCCGAGGCATCTGAAGGCCAAGGACACGCTGTAC GTCGCGGAGGCTATGCGCGAGCTCCTCGACGTCGAGGTCGAGGTCCGGGTGATCCGCGAGAACCCGTCGGACCACGACGC GATGCTGGAGCTCTACGGCCGGGAACTCCCCGAGGTCCTGGACGGGGCCGAGGAGGTGTACCTGGACGTGACGACGGGTA CGCCCGCCCAGTCGCTGGCCCTCGCGCTCAAGGGTCTCGAGGTCGAGCCGGACGCGGAGCTCGTGTACGTGTCCGAATCC ACCGGGACTACCCGGATCCGCGTGGGCGACGAGCTGCTCCGGCGGATCGCGGACGAGCTCCTGGAGTACGGGCTGAACGA CCCGGCCGCCAGGGTCCTGTCCCACACCGGGCTGGACGACCTCCGTACCTACGCCGAGGCGCGGGCGGCCGAGGACCGGT TCGAGTTCGAGCGGGCTCGGGAGCTCTACCGGGGGCTCCCCGAGGACTTCCTGGACGTCTCGGATCGACTGGAGCGCGTG GAGCGGGCGCTCTCGGACGATCCCGTGGAGAGAATGGCCGAGCGCACCCGTTACGTCCTGGACCGGGCGCTGACGCACCT GAAGCGTGGCGAGTACGGTGAGTACGTCCTCCGGACCTGCGTCGCCCAGGAGATGATCCTGTGGACGACCTTCTCCGCGG TCTCCGGTCGCGAGCCTGACCCGGACGAGTTCGTGCGGCACGCGTCGCGGGAGGCGGACTGGGATCCCAAGTACGGTAAC CTCGGGGACTTGATCCGCAGGGATCCGGTGAGCACCCTAGCTCGCTACCTCGGGGACTACCTGGAGGACCTCACCTCGCT CGAGGTCACCGACGCGGGTCGGGCGGCCGCCGTGAACGCCCTGGCCAGCTACTACGTGGTTAAGGGGCTCAGGGAGCTCC GGGACGACTACGCGCACCGGGCGATCAGGATCACGCTCGAGGATGTCCGGGAGGCCCTCGGACGCTCGCGCGTGGACTCG GAGTACTGGGAGAGGAAGCACGGTCACGGCCCCGACTTCAAGTTCCCGTCGGAGGAGGACGACCCGGAGGCGGCCGTCGA GGCCCTCCGGGAGTGCGTGGACGCGATCGAGCGGGCGGTGGGTCGATGA
Upstream 100 bases:
>100_bases CCGGGTTCCTCCGGGGCGACCCGATGTACCGGGGCGGGTACGAGCTCGTCGTCTACGGTCGAGGGTTCCCGGTCCGGGTC AGGGCGTTGGGGGACGGGGA
Downstream 100 bases:
>100_bases GCGGGCTCGAAACCGTCGAAGTCCGGCTGGAGGTGCTCACGCCGCTCCACGTCGGCGTTCCCCGGGAGGAAGAGTTGGTC CGCGGGCTCGACTATCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTVLLVRNVGVNDVRVDGERVNEPYYVLKELVESGDLDGVSFPILERVLEELEPDRIVLFATDQDPGSTPRHLKAKDTLY VAEAMRELLDVEVEVRVIRENPSDHDAMLELYGRELPEVLDGAEEVYLDVTTGTPAQSLALALKGLEVEPDAELVYVSES TGTTRIRVGDELLRRIADELLEYGLNDPAARVLSHTGLDDLRTYAEARAAEDRFEFERARELYRGLPEDFLDVSDRLERV ERALSDDPVERMAERTRYVLDRALTHLKRGEYGEYVLRTCVAQEMILWTTFSAVSGREPDPDEFVRHASREADWDPKYGN LGDLIRRDPVSTLARYLGDYLEDLTSLEVTDAGRAAAVNALASYYVVKGLRELRDDYAHRAIRITLEDVREALGRSRVDS EYWERKHGHGPDFKFPSEEDDPEAAVEALRECVDAIERAVGR
Sequences:
>Translated_442_residues MTVLLVRNVGVNDVRVDGERVNEPYYVLKELVESGDLDGVSFPILERVLEELEPDRIVLFATDQDPGSTPRHLKAKDTLY VAEAMRELLDVEVEVRVIRENPSDHDAMLELYGRELPEVLDGAEEVYLDVTTGTPAQSLALALKGLEVEPDAELVYVSES TGTTRIRVGDELLRRIADELLEYGLNDPAARVLSHTGLDDLRTYAEARAAEDRFEFERARELYRGLPEDFLDVSDRLERV ERALSDDPVERMAERTRYVLDRALTHLKRGEYGEYVLRTCVAQEMILWTTFSAVSGREPDPDEFVRHASREADWDPKYGN LGDLIRRDPVSTLARYLGDYLEDLTSLEVTDAGRAAAVNALASYYVVKGLRELRDDYAHRAIRITLEDVREALGRSRVDS EYWERKHGHGPDFKFPSEEDDPEAAVEALRECVDAIERAVGR >Mature_441_residues TVLLVRNVGVNDVRVDGERVNEPYYVLKELVESGDLDGVSFPILERVLEELEPDRIVLFATDQDPGSTPRHLKAKDTLYV AEAMRELLDVEVEVRVIRENPSDHDAMLELYGRELPEVLDGAEEVYLDVTTGTPAQSLALALKGLEVEPDAELVYVSEST GTTRIRVGDELLRRIADELLEYGLNDPAARVLSHTGLDDLRTYAEARAAEDRFEFERARELYRGLPEDFLDVSDRLERVE RALSDDPVERMAERTRYVLDRALTHLKRGEYGEYVLRTCVAQEMILWTTFSAVSGREPDPDEFVRHASREADWDPKYGNL GDLIRRDPVSTLARYLGDYLEDLTSLEVTDAGRAAAVNALASYYVVKGLRELRDDYAHRAIRITLEDVREALGRSRVDSE YWERKHGHGPDFKFPSEEDDPEAAVEALRECVDAIERAVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50171; Mature: 50039
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLLVRNVGVNDVRVDGERVNEPYYVLKELVESGDLDGVSFPILERVLEELEPDRIVLF CEEEEEECCCCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEE ATDQDPGSTPRHLKAKDTLYVAEAMRELLDVEVEVRVIRENPSDHDAMLELYGRELPEVL EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCHHHHHHHHHHHHHHHHH DGAEEVYLDVTTGTPAQSLALALKGLEVEPDAELVYVSESTGTTRIRVGDELLRRIADEL CCCHHEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHH LEYGLNDPAARVLSHTGLDDLRTYAEARAAEDRFEFERARELYRGLPEDFLDVSDRLERV HHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ERALSDDPVERMAERTRYVLDRALTHLKRGEYGEYVLRTCVAQEMILWTTFSAVSGREPD HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDEFVRHASREADWDPKYGNLGDLIRRDPVSTLARYLGDYLEDLTSLEVTDAGRAAAVNA HHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LASYYVVKGLRELRDDYAHRAIRITLEDVREALGRSRVDSEYWERKHGHGPDFKFPSEED HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCC DPEAAVEALRECVDAIERAVGR CHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVLLVRNVGVNDVRVDGERVNEPYYVLKELVESGDLDGVSFPILERVLEELEPDRIVLF EEEEEECCCCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEE ATDQDPGSTPRHLKAKDTLYVAEAMRELLDVEVEVRVIRENPSDHDAMLELYGRELPEVL EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCHHHHHHHHHHHHHHHHH DGAEEVYLDVTTGTPAQSLALALKGLEVEPDAELVYVSESTGTTRIRVGDELLRRIADEL CCCHHEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHH LEYGLNDPAARVLSHTGLDDLRTYAEARAAEDRFEFERARELYRGLPEDFLDVSDRLERV HHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ERALSDDPVERMAERTRYVLDRALTHLKRGEYGEYVLRTCVAQEMILWTTFSAVSGREPD HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDEFVRHASREADWDPKYGNLGDLIRRDPVSTLARYLGDYLEDLTSLEVTDAGRAAAVNA HHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LASYYVVKGLRELRDDYAHRAIRITLEDVREALGRSRVDSEYWERKHGHGPDFKFPSEED HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCC DPEAAVEALRECVDAIERAVGR CHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA