Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094748

Identifier: 20094748

GI number: 20094748

Start: 1326771

End: 1327766

Strand: Reverse

Name: 20094748

Synonym: MK1312

Alternate gene names: NA

Gene position: 1327766-1326771 (Counterclockwise)

Preceding gene: 20094749

Following gene: 20094747

Centisome position: 78.34

GC content: 67.77

Gene sequence:

>996_bases
ATGGGCGCCCCGAACGACACCGTGATCTTCCTGAGAAGGGGTAAGATCGAGAGGAGAGAAGACGCGTTTCGGATCGGGAA
GAGCAAGTACTCAGCGGTCCGTACTACCGGGATAATCATCGCGGGTGGAGCCCAGATCACGACCCAGGCCGTGCGGTTAG
CGCTCAGAAACGAGGTCCCGATAGTGTACCTCGGAGGGAACCGGATCCTGGGCGTGACCGTACCGTTCTCGGAGCGGTAC
GCGACCCTGAGGTTGAAGCAGTACGAGATCGCCTCACAACCGTCGGCGCGTCTCGCCTTCGCCCGTCCGCTGATCGCCTC
CTCGATCCTGGCCAGGGCCGCGGTCCTCGAGTTCCTAGCCAATGAGACCGGGATCACCGGATTAGAGGACGCGGCTGATG
AGGTGAGGTCCGAGGCCGAGAGGGCGCTGAACGCGGGTTCCACCGACGCGCTGCGCGGTTACGAGGGGAGGGCGGCCTGC
CGGTACTTCCGGGCCCTGGCGGAGGTCCTACCCGACTGGGCGTTCTCCGGGAGGAGGACGAGGCGTCCCCCGAGGGACCC
GTTCAACGCGGCGATCAGCTTCGGGTACGCGGGCGTGCTGTTGCCGGTCCTGCTCTCGAGGACGGTGGCGGCGGGGCTCG
AGCCGTTCCTGGGGTTCCTCCACGGTCCCAGGGGGAGGCGGCCGGGGCTGATCCTGGACCTGATGGAGGAGTGGAGGGCG
CTCGCCGTGGACGTCCCCGTGCTCCGCCGCTTCCTGGACGGCTCGCTGTCTAGGGAGATGTTCAGGTGGAAGGGAGACGC
GGTCCTCCTGCGCGATCTCGACGCCGTGTCGGCCCCGGTCCTGACCGTCCTGAGCAGGGTCCGGGGTGGCCTGCTCGAGG
CGGTCGACCGTCGGATCCGCGAGGTCCGCGACGGGGTCTCGCGTCAGTCCCCGCCCGAGCCGCTCGAATTCGACCCCGAG
GACGTGGGGGTTGTGTGGGATGCCCTGGAGGTCTAA

Upstream 100 bases:

>100_bases
TCGTTCATAAAAATAATATATATACTGATATTTTCGTCAAACTAAGGCGTAAATAATATCAACCCGTAACCTACCTTCTT
TGGACGGTGGGGTGTCCGAT

Downstream 100 bases:

>100_bases
CGCTGTTCGGGTCCGGATGGACTTCGAGGTTCTCCGTAGGGAGGACTACCACGATCGAGGGGCCGCCCGCGGAGCCGTGA
AGGACCACTTGAGGGAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVPIVYLGGNRILGVTVPFSERY
ATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLANETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAAC
RYFRALAEVLPDWAFSGRRTRRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA
LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIREVRDGVSRQSPPEPLEFDPE
DVGVVWDALEV

Sequences:

>Translated_331_residues
MGAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVPIVYLGGNRILGVTVPFSERY
ATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLANETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAAC
RYFRALAEVLPDWAFSGRRTRRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA
LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIREVRDGVSRQSPPEPLEFDPE
DVGVVWDALEV
>Mature_330_residues
GAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVPIVYLGGNRILGVTVPFSERYA
TLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLANETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAACR
YFRALAEVLPDWAFSGRRTRRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRAL
AVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIREVRDGVSRQSPPEPLEFDPED
VGVVWDALEV

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 36447; Mature: 36316

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVP
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCC
IVYLGGNRILGVTVPFSERYATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLA
EEEECCCEEEEEECCCHHCHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAACRYFRALAEVLPDWAFSGRRT
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHCCCCCC
RRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIR
HHCCHHHHHHHHCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRDGVSRQSPPEPLEFDPEDVGVVWDALEV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVP
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCC
IVYLGGNRILGVTVPFSERYATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLA
EEEECCCEEEEEECCCHHCHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAACRYFRALAEVLPDWAFSGRRT
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHCCCCCC
RRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIR
HHCCHHHHHHHHCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRDGVSRQSPPEPLEFDPEDVGVVWDALEV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]