| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094748
Identifier: 20094748
GI number: 20094748
Start: 1326771
End: 1327766
Strand: Reverse
Name: 20094748
Synonym: MK1312
Alternate gene names: NA
Gene position: 1327766-1326771 (Counterclockwise)
Preceding gene: 20094749
Following gene: 20094747
Centisome position: 78.34
GC content: 67.77
Gene sequence:
>996_bases ATGGGCGCCCCGAACGACACCGTGATCTTCCTGAGAAGGGGTAAGATCGAGAGGAGAGAAGACGCGTTTCGGATCGGGAA GAGCAAGTACTCAGCGGTCCGTACTACCGGGATAATCATCGCGGGTGGAGCCCAGATCACGACCCAGGCCGTGCGGTTAG CGCTCAGAAACGAGGTCCCGATAGTGTACCTCGGAGGGAACCGGATCCTGGGCGTGACCGTACCGTTCTCGGAGCGGTAC GCGACCCTGAGGTTGAAGCAGTACGAGATCGCCTCACAACCGTCGGCGCGTCTCGCCTTCGCCCGTCCGCTGATCGCCTC CTCGATCCTGGCCAGGGCCGCGGTCCTCGAGTTCCTAGCCAATGAGACCGGGATCACCGGATTAGAGGACGCGGCTGATG AGGTGAGGTCCGAGGCCGAGAGGGCGCTGAACGCGGGTTCCACCGACGCGCTGCGCGGTTACGAGGGGAGGGCGGCCTGC CGGTACTTCCGGGCCCTGGCGGAGGTCCTACCCGACTGGGCGTTCTCCGGGAGGAGGACGAGGCGTCCCCCGAGGGACCC GTTCAACGCGGCGATCAGCTTCGGGTACGCGGGCGTGCTGTTGCCGGTCCTGCTCTCGAGGACGGTGGCGGCGGGGCTCG AGCCGTTCCTGGGGTTCCTCCACGGTCCCAGGGGGAGGCGGCCGGGGCTGATCCTGGACCTGATGGAGGAGTGGAGGGCG CTCGCCGTGGACGTCCCCGTGCTCCGCCGCTTCCTGGACGGCTCGCTGTCTAGGGAGATGTTCAGGTGGAAGGGAGACGC GGTCCTCCTGCGCGATCTCGACGCCGTGTCGGCCCCGGTCCTGACCGTCCTGAGCAGGGTCCGGGGTGGCCTGCTCGAGG CGGTCGACCGTCGGATCCGCGAGGTCCGCGACGGGGTCTCGCGTCAGTCCCCGCCCGAGCCGCTCGAATTCGACCCCGAG GACGTGGGGGTTGTGTGGGATGCCCTGGAGGTCTAA
Upstream 100 bases:
>100_bases TCGTTCATAAAAATAATATATATACTGATATTTTCGTCAAACTAAGGCGTAAATAATATCAACCCGTAACCTACCTTCTT TGGACGGTGGGGTGTCCGAT
Downstream 100 bases:
>100_bases CGCTGTTCGGGTCCGGATGGACTTCGAGGTTCTCCGTAGGGAGGACTACCACGATCGAGGGGCCGCCCGCGGAGCCGTGA AGGACCACTTGAGGGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MGAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVPIVYLGGNRILGVTVPFSERY ATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLANETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAAC RYFRALAEVLPDWAFSGRRTRRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIREVRDGVSRQSPPEPLEFDPE DVGVVWDALEV
Sequences:
>Translated_331_residues MGAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVPIVYLGGNRILGVTVPFSERY ATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLANETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAAC RYFRALAEVLPDWAFSGRRTRRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIREVRDGVSRQSPPEPLEFDPE DVGVVWDALEV >Mature_330_residues GAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVPIVYLGGNRILGVTVPFSERYA TLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLANETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAACR YFRALAEVLPDWAFSGRRTRRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRAL AVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIREVRDGVSRQSPPEPLEFDPED VGVVWDALEV
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002729 - InterPro: IPR019858 [H]
Pfam domain/function: PF01867 DUF48 [H]
EC number: NA
Molecular weight: Translated: 36447; Mature: 36316
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVP CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCC IVYLGGNRILGVTVPFSERYATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLA EEEECCCEEEEEECCCHHCHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAACRYFRALAEVLPDWAFSGRRT CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHCCCCCC RRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIR HHCCHHHHHHHHCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVRDGVSRQSPPEPLEFDPEDVGVVWDALEV HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure GAPNDTVIFLRRGKIERREDAFRIGKSKYSAVRTTGIIIAGGAQITTQAVRLALRNEVP CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCC IVYLGGNRILGVTVPFSERYATLRLKQYEIASQPSARLAFARPLIASSILARAAVLEFLA EEEECCCEEEEEECCCHHCHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NETGITGLEDAADEVRSEAERALNAGSTDALRGYEGRAACRYFRALAEVLPDWAFSGRRT CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHCCCCCC RRPPRDPFNAAISFGYAGVLLPVLLSRTVAAGLEPFLGFLHGPRGRRPGLILDLMEEWRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LAVDVPVLRRFLDGSLSREMFRWKGDAVLLRDLDAVSAPVLTVLSRVRGGLLEAVDRRIR HHCCHHHHHHHHCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVRDGVSRQSPPEPLEFDPEDVGVVWDALEV HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]