| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094732
Identifier: 20094732
GI number: 20094732
Start: 1298182
End: 1300266
Strand: Reverse
Name: 20094732
Synonym: MK1296
Alternate gene names: NA
Gene position: 1300266-1298182 (Counterclockwise)
Preceding gene: 20094736
Following gene: 20094731
Centisome position: 76.71
GC content: 70.84
Gene sequence:
>2085_bases TTGGAGAACCGGCTCTGGGCCCTCACGGTGACCCCCACCCGAGTGGGCACTGGTGGGCGACCCGGCGCGATCGACCTCCC GCTGATCCGGCGCAGGCACACCCGCGTACCTTACGTCCCGGGGAGCTCCGTGAAGGGAGCGCTGAGGACCCACGTCGAGG CCGAGCTGGAGAAGCCGGACGACCTGGTCGATGAGATCCTGCGCGATCTGGGTGAGGACACCGAGGAGCGGCGGGAGCGC GCCCTGCGGGTGCTCTTCGGCGACCGAGACACCAAGGGCGCGGTGACGTTCGGGGACCTCCTGCCCGTGGCCGTCCCCGC GCCCGTCGCGCTGGAGGGTGGTAAAACGACGCCCCTCGTCTGGCTCACCTGTCCCTACGTCCTGGATTGGATCGGCGTCG AGGCGCCCGAGCCCGACGGGGAGGCGCTCGCGCCCTCGGGCTTCCCCGCGGAGCGCGTGGTGCTGGAGCACCGCGAGCTC GTGGTCCGCAGGAACGGGAAAGTCGACGGCGTCGCGGACGAGCTGGTCGTCCCGGGACCGTGGAAGCTACCGCTGCACTC CCGCCTCCTAATCCTCGACGACGCTACCTTCGCCGGGCTCCTCGACCCGGACCGGCCCGTCGTCACCGAGCTCCGCACCC GCGTCCGGCTGGGTGGCCCGTGGGACAAGACCGTGGAGGAGGGCGCCCTCTGGACCGAGGAGTTCCTGCCCCAGGCTCAC CCTCCTCGCGGGACCGTACGAGGTCGACGCGTCCACGCTGGGTCCGACCGAGGAGCGCGCGCTCGAGGTCCTCCGGAGGG TGACCTCGGTACAGCTCGGCGCGGGCGGTTCCGTCGGCTTCGGCGTCCTACGGTTGAACTTCGAGGGGGAGCTGGGATGA GCGAGCGTTCCCCGGAGAACGTCCTGCTGTCGCGGCTCCGGGAGGACGTCGACGAGGAGCTCAAGGGTGACCTCTCGACC CTGTGCTCGGTCCTCCTGTACTACGGTCTGCCGGGCGCCCTGGTGCTCGCGGAACGGGAGGACGTGAGGGAGGCGCTCTC GAGGCTGCCGCTCGACCGGATCGAACGCGAGCTGGAGAGAGAAGGTCTACCCCGGGCCGACAGACTGGCCACGCGGCTCG CCGACCTGGCCCGGAACGCGGCCGCCGTCGGCGAGTTGCCCGAGGATGAGGGGCGCGACCGCGTGGAAAGACTGCGCCGG AGGGTCGCGGAGGCGGCGGAGGAGTCCCTAGTCCCCGAGGAGGGCGTCCGGACGCACCCGTACCACGAGAAACGGACGCT GGCCCTCCGGGCGCTGAGTGACGGGGAGGAGAACCTCAGACGGGAGGTCCGAAGGCTCCTGAGACGGGTCGTGGACGCCG CGGAGAAAGCGGCCCGCTCCGACGAGATCCGCGGGTACGTCGGGTCTTACCTGAAGACGCTGAGGGAGCTGGGCCGGAGC CCGCACCTCAGGGTCCGCGAGGTCGAGCTCCGGTTCCCGCACTCCAGGCTGGTCGTGGGGATGGGCGGCCCGCACCCGGC CGAGAACGACCTCACCCTGGACCCGGTGACCGGCCTGCCCGTGATCCCGGGGACGACCCTCAAGGGCGTGGCCCGCGCGG CCGGCGAGCTGATCCTCGAACGCGGAGACCCCGACGAGCTGAGGAAGTACTTCGGGGCCGACGACACCCGACAGGCCCGG AAGCGCTTCCGTGAGGTGTTCGGATCGAAGCCAAGGGAGTCGGAACCCAAAGAGTCCGACGACGGGAACGCATCGGAGTC CAAGCGCGCCGGCGAGGTGACCTTCCACGACGCGCTCCCGGATCCGGACTGGTTGAGGGACGTCGACTCGCCGCTCGAGG TCGACGTCCTGAACCCGCACTACGGCGAGTACTACGAGGGAGAGGGGCCTCCCCACGAGTCGATGCGACCCAAGCCCGTC GAGTTCCTGACAGTCCGGCGGGGTTCCAGGTGGCGCACGGTCCTGGTCTCGGAGCGGAGGGGGTCGCTGGACGTCGCCCT GAGGCTCCTGAAGTACGGCGTGGAGCGCCTGGGTATCGGCGCCAGGACGTGCGCCGGCTACGGGTACGGCGAGGTTCGGT ACTGA
Upstream 100 bases:
>100_bases CGAGAGGACGCTACGCCGGTCGTTCCGCGGCGTCGAGCGCCACGGGATCGAAGTAACCGAGAGCCGCGTGAGGGTGTCGA AATCGGCGGGGTGAACACCC
Downstream 100 bases:
>100_bases TGGGAGTATTACTTAATTTAAGTAATGGTCGTACCATCTCGTACTGGTTTTTCATAGGGTTAACTTACTTGGTAGAAAGG CGGGTTCTTCCCCGTAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPDDLVDEILRDLGEDTEERRER ALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLVWLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHREL VVRRNGKVDGVADELVVPGPWKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPENVLLSRLREDVDEELKGDLST LCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELEREGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRR RVAEAAEESLVPEEGVRTHPYHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILERGDPDELRKYFGADDTRQAR KRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALPDPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPV EFLTVRRGSRWRTVLVSERRGSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY
Sequences:
>Translated_694_residues MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPDDLVDEILRDLGEDTEERRER ALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLVWLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHREL VVRRNGKVDGVADELVVPGPWKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPENVLLSRLREDVDEELKGDLST LCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELEREGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRR RVAEAAEESLVPEEGVRTHPYHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILERGDPDELRKYFGADDTRQAR KRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALPDPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPV EFLTVRRGSRWRTVLVSERRGSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY >Mature_694_residues MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPDDLVDEILRDLGEDTEERRER ALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLVWLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHREL VVRRNGKVDGVADELVVPGPWKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPENVLLSRLREDVDEELKGDLST LCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELEREGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRR RVAEAAEESLVPEEGVRTHPYHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILERGDPDELRKYFGADDTRQAR KRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALPDPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPV EFLTVRRGSRWRTVLVSERRGSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY
Specific function: Unknown
COG id: COG1336
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77475; Mature: 77475
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPD CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCH DLVDEILRDLGEDTEERRERALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLV HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEHHCCCHHCCCCCEEECCCCCCCEE WLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHRELVVRRNGKVDGVADELVVPGP EEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC WKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH CCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCC PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPEN CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHH VLLSRLREDVDEELKGDLSTLCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELER HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHH EGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRRRVAEAAEESLVPEEGVRTHP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILE CCCEEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC RGDPDELRKYFGADDTRQARKRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALP CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCC DPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPVEFLTVRRGSRWRTVLVSERR CCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC GSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC >Mature Secondary Structure MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPD CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCH DLVDEILRDLGEDTEERRERALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLV HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEHHCCCHHCCCCCEEECCCCCCCEE WLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHRELVVRRNGKVDGVADELVVPGP EEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC WKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH CCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCC PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPEN CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHH VLLSRLREDVDEELKGDLSTLCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELER HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHH EGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRRRVAEAAEESLVPEEGVRTHP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILE CCCEEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC RGDPDELRKYFGADDTRQARKRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALP CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCC DPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPVEFLTVRRGSRWRTVLVSERR CCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC GSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA