Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094732

Identifier: 20094732

GI number: 20094732

Start: 1298182

End: 1300266

Strand: Reverse

Name: 20094732

Synonym: MK1296

Alternate gene names: NA

Gene position: 1300266-1298182 (Counterclockwise)

Preceding gene: 20094736

Following gene: 20094731

Centisome position: 76.71

GC content: 70.84

Gene sequence:

>2085_bases
TTGGAGAACCGGCTCTGGGCCCTCACGGTGACCCCCACCCGAGTGGGCACTGGTGGGCGACCCGGCGCGATCGACCTCCC
GCTGATCCGGCGCAGGCACACCCGCGTACCTTACGTCCCGGGGAGCTCCGTGAAGGGAGCGCTGAGGACCCACGTCGAGG
CCGAGCTGGAGAAGCCGGACGACCTGGTCGATGAGATCCTGCGCGATCTGGGTGAGGACACCGAGGAGCGGCGGGAGCGC
GCCCTGCGGGTGCTCTTCGGCGACCGAGACACCAAGGGCGCGGTGACGTTCGGGGACCTCCTGCCCGTGGCCGTCCCCGC
GCCCGTCGCGCTGGAGGGTGGTAAAACGACGCCCCTCGTCTGGCTCACCTGTCCCTACGTCCTGGATTGGATCGGCGTCG
AGGCGCCCGAGCCCGACGGGGAGGCGCTCGCGCCCTCGGGCTTCCCCGCGGAGCGCGTGGTGCTGGAGCACCGCGAGCTC
GTGGTCCGCAGGAACGGGAAAGTCGACGGCGTCGCGGACGAGCTGGTCGTCCCGGGACCGTGGAAGCTACCGCTGCACTC
CCGCCTCCTAATCCTCGACGACGCTACCTTCGCCGGGCTCCTCGACCCGGACCGGCCCGTCGTCACCGAGCTCCGCACCC
GCGTCCGGCTGGGTGGCCCGTGGGACAAGACCGTGGAGGAGGGCGCCCTCTGGACCGAGGAGTTCCTGCCCCAGGCTCAC
CCTCCTCGCGGGACCGTACGAGGTCGACGCGTCCACGCTGGGTCCGACCGAGGAGCGCGCGCTCGAGGTCCTCCGGAGGG
TGACCTCGGTACAGCTCGGCGCGGGCGGTTCCGTCGGCTTCGGCGTCCTACGGTTGAACTTCGAGGGGGAGCTGGGATGA
GCGAGCGTTCCCCGGAGAACGTCCTGCTGTCGCGGCTCCGGGAGGACGTCGACGAGGAGCTCAAGGGTGACCTCTCGACC
CTGTGCTCGGTCCTCCTGTACTACGGTCTGCCGGGCGCCCTGGTGCTCGCGGAACGGGAGGACGTGAGGGAGGCGCTCTC
GAGGCTGCCGCTCGACCGGATCGAACGCGAGCTGGAGAGAGAAGGTCTACCCCGGGCCGACAGACTGGCCACGCGGCTCG
CCGACCTGGCCCGGAACGCGGCCGCCGTCGGCGAGTTGCCCGAGGATGAGGGGCGCGACCGCGTGGAAAGACTGCGCCGG
AGGGTCGCGGAGGCGGCGGAGGAGTCCCTAGTCCCCGAGGAGGGCGTCCGGACGCACCCGTACCACGAGAAACGGACGCT
GGCCCTCCGGGCGCTGAGTGACGGGGAGGAGAACCTCAGACGGGAGGTCCGAAGGCTCCTGAGACGGGTCGTGGACGCCG
CGGAGAAAGCGGCCCGCTCCGACGAGATCCGCGGGTACGTCGGGTCTTACCTGAAGACGCTGAGGGAGCTGGGCCGGAGC
CCGCACCTCAGGGTCCGCGAGGTCGAGCTCCGGTTCCCGCACTCCAGGCTGGTCGTGGGGATGGGCGGCCCGCACCCGGC
CGAGAACGACCTCACCCTGGACCCGGTGACCGGCCTGCCCGTGATCCCGGGGACGACCCTCAAGGGCGTGGCCCGCGCGG
CCGGCGAGCTGATCCTCGAACGCGGAGACCCCGACGAGCTGAGGAAGTACTTCGGGGCCGACGACACCCGACAGGCCCGG
AAGCGCTTCCGTGAGGTGTTCGGATCGAAGCCAAGGGAGTCGGAACCCAAAGAGTCCGACGACGGGAACGCATCGGAGTC
CAAGCGCGCCGGCGAGGTGACCTTCCACGACGCGCTCCCGGATCCGGACTGGTTGAGGGACGTCGACTCGCCGCTCGAGG
TCGACGTCCTGAACCCGCACTACGGCGAGTACTACGAGGGAGAGGGGCCTCCCCACGAGTCGATGCGACCCAAGCCCGTC
GAGTTCCTGACAGTCCGGCGGGGTTCCAGGTGGCGCACGGTCCTGGTCTCGGAGCGGAGGGGGTCGCTGGACGTCGCCCT
GAGGCTCCTGAAGTACGGCGTGGAGCGCCTGGGTATCGGCGCCAGGACGTGCGCCGGCTACGGGTACGGCGAGGTTCGGT
ACTGA

Upstream 100 bases:

>100_bases
CGAGAGGACGCTACGCCGGTCGTTCCGCGGCGTCGAGCGCCACGGGATCGAAGTAACCGAGAGCCGCGTGAGGGTGTCGA
AATCGGCGGGGTGAACACCC

Downstream 100 bases:

>100_bases
TGGGAGTATTACTTAATTTAAGTAATGGTCGTACCATCTCGTACTGGTTTTTCATAGGGTTAACTTACTTGGTAGAAAGG
CGGGTTCTTCCCCGTAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPDDLVDEILRDLGEDTEERRER
ALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLVWLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHREL
VVRRNGKVDGVADELVVPGPWKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH
PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPENVLLSRLREDVDEELKGDLST
LCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELEREGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRR
RVAEAAEESLVPEEGVRTHPYHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS
PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILERGDPDELRKYFGADDTRQAR
KRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALPDPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPV
EFLTVRRGSRWRTVLVSERRGSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY

Sequences:

>Translated_694_residues
MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPDDLVDEILRDLGEDTEERRER
ALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLVWLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHREL
VVRRNGKVDGVADELVVPGPWKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH
PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPENVLLSRLREDVDEELKGDLST
LCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELEREGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRR
RVAEAAEESLVPEEGVRTHPYHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS
PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILERGDPDELRKYFGADDTRQAR
KRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALPDPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPV
EFLTVRRGSRWRTVLVSERRGSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY
>Mature_694_residues
MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPDDLVDEILRDLGEDTEERRER
ALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLVWLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHREL
VVRRNGKVDGVADELVVPGPWKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH
PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPENVLLSRLREDVDEELKGDLST
LCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELEREGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRR
RVAEAAEESLVPEEGVRTHPYHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS
PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILERGDPDELRKYFGADDTRQAR
KRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALPDPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPV
EFLTVRRGSRWRTVLVSERRGSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77475; Mature: 77475

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPD
CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCH
DLVDEILRDLGEDTEERRERALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLV
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEHHCCCHHCCCCCEEECCCCCCCEE
WLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHRELVVRRNGKVDGVADELVVPGP
EEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH
CCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCC
PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPEN
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHH
VLLSRLREDVDEELKGDLSTLCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELER
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHH
EGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRRRVAEAAEESLVPEEGVRTHP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILE
CCCEEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
RGDPDELRKYFGADDTRQARKRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALP
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCC
DPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPVEFLTVRRGSRWRTVLVSERR
CCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC
GSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY
CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MENRLWALTVTPTRVGTGGRPGAIDLPLIRRRHTRVPYVPGSSVKGALRTHVEAELEKPD
CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCH
DLVDEILRDLGEDTEERRERALRVLFGDRDTKGAVTFGDLLPVAVPAPVALEGGKTTPLV
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEHHCCCHHCCCCCEEECCCCCCCEE
WLTCPYVLDWIGVEAPEPDGEALAPSGFPAERVVLEHRELVVRRNGKVDGVADELVVPGP
EEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WKLPLHSRLLILDDATFAGLLDPDRPVVTELRTRVRLGGPWDKTVEEGALWTEEFLPQAH
CCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCC
PPRGTVRGRRVHAGSDRGARARGPPEGDLGTARRGRFRRLRRPTVELRGGAGMSERSPEN
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHH
VLLSRLREDVDEELKGDLSTLCSVLLYYGLPGALVLAEREDVREALSRLPLDRIERELER
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHH
EGLPRADRLATRLADLARNAAAVGELPEDEGRDRVERLRRRVAEAAEESLVPEEGVRTHP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YHEKRTLALRALSDGEENLRREVRRLLRRVVDAAEKAARSDEIRGYVGSYLKTLRELGRS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PHLRVREVELRFPHSRLVVGMGGPHPAENDLTLDPVTGLPVIPGTTLKGVARAAGELILE
CCCEEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
RGDPDELRKYFGADDTRQARKRFREVFGSKPRESEPKESDDGNASESKRAGEVTFHDALP
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCC
DPDWLRDVDSPLEVDVLNPHYGEYYEGEGPPHESMRPKPVEFLTVRRGSRWRTVLVSERR
CCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC
GSLDVALRLLKYGVERLGIGARTCAGYGYGEVRY
CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA