| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094703
Identifier: 20094703
GI number: 20094703
Start: 1259840
End: 1261165
Strand: Direct
Name: 20094703
Synonym: MK1267
Alternate gene names: NA
Gene position: 1259840-1261165 (Clockwise)
Preceding gene: 20094702
Following gene: 20094705
Centisome position: 74.33
GC content: 48.87
Gene sequence:
>1326_bases GTGCCTGAGTGCGTCCCGCTGAGCCCGACCGATAGGTTCTACGACAAGGTGAAATCCTACGTGAGACACCGGATGTCGGA CCTCGGCTTAAGGATTGGAGATGCCGCTCTTTACGATACAAAGTACGGTCCCCTTTCACCACTTCCCATTTTCATGGATG GATGGTGGCGTGGATCATGGATTCGAGAGCGTAGATTATGGGATGGAAAGCTGGACAAGCCATGGCTATTAACCGTGTCA GTCCTAGCCGAACTTTTCGATTCTAATCCTGAAGAAATTGCTGGCATTCCCTCAATTGAAATTGAACCAGGAGCATCAAA ATTGGGATATATGCTAAGGAAAATGATAAAGACTGGAGAGGAGTCGTTAAAAGAGAAACGGGAGTATGGACACCTAAGCG ACTATATTCTGTGGGCACTGGAAGTAATTGAGGTGATCACTCGAAGAATCAGGGATCTCGTACTGGACAAGCCAAGCCTT GAGACCGCCCTGAACTTTTGGGTCATTGGAGCTGTTCTTAGCTCTCGAAACGTTTCAAAAGTTACTGTCATTAGCGATTC AGTGGATCTTGAAATACCGAAGTCTTCTGTCGAGATTCCGTTACCTTATGGCATTAACATTCAAGGTAGTAGCTCAATAA CTTCCACGCTCTATGTAATTGCTCACGCGATGGTACATCGTGGGATAGATGAAGACCAGCTGTTAGAACACTTTAATATA CAAACAGTGTGCGCGTTATGGATCGAGGAGAATATGCATAAAAAGATGATTAAGAAAGGACTAGAGGAATTAAAACACGG TTTTGAAAAGTTACTAAAGAAGTCGAAGTGGGAGCTGGAACTCGAAGACTTAGGGATCGATGACCCCGAAGCGTTCTTCC ACGAAGTCTCGAAAAAACTCGCCGAGATTGTGACCAACGTTTCAACCGCTTTTGAAACTATTCAAGATAAGCCCGAAGAG ATCGCCCGGAACCTGCTCTCGGTCGACGAGGAGATCCGACTCGGGGACGAGGTCATCCCGCCCGAAGAGTACGATCCCAA GTGGAGACAATCACAACGCGTGAAACAACACGTAAAAGGCACTCTGGAAAGCATCGACACCGAGAAACTCGCGGAAGATG CGTTGAAGACGGTAGGAAGGCTCGTAGGCGGGTCGAAGGGCGAGGAGATGGCCGAGACCGCGGCCAAGCTGGCGACGGAG GTAGTAAAACGAGGGTTGGACATGGTGTCCGAGTCAAGTGGGAATCGTAAGGAGAGGAGTGTGCTAGGGGAACTCATCGA GGCGGTCGTCAAGGAGGTCATGGACGGCGCTCGGAAGAGGAAGTAG
Upstream 100 bases:
>100_bases AGGAGTATCTCAACTGTGTGAAGCACTGTAAGGTTGGTTAAGTTAATTTAGAGCGGACGTTGTCTCACCAGGAGGTTCCG TACCGTCAGGGGGCGTTCCA
Downstream 100 bases:
>100_bases GTGAAGTCGCCCTTACATTCCTCGATAATCCCTATATCACCGCAACTCCCGACCGTTGGGTCCGGCGGATTATCTGGCGC TCAGCGTCCAGCAACAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPECVPLSPTDRFYDKVKSYVRHRMSDLGLRIGDAALYDTKYGPLSPLPIFMDGWWRGSWIRERRLWDGKLDKPWLLTVS VLAELFDSNPEEIAGIPSIEIEPGASKLGYMLRKMIKTGEESLKEKREYGHLSDYILWALEVIEVITRRIRDLVLDKPSL ETALNFWVIGAVLSSRNVSKVTVISDSVDLEIPKSSVEIPLPYGINIQGSSSITSTLYVIAHAMVHRGIDEDQLLEHFNI QTVCALWIEENMHKKMIKKGLEELKHGFEKLLKKSKWELELEDLGIDDPEAFFHEVSKKLAEIVTNVSTAFETIQDKPEE IARNLLSVDEEIRLGDEVIPPEEYDPKWRQSQRVKQHVKGTLESIDTEKLAEDALKTVGRLVGGSKGEEMAETAAKLATE VVKRGLDMVSESSGNRKERSVLGELIEAVVKEVMDGARKRK
Sequences:
>Translated_441_residues MPECVPLSPTDRFYDKVKSYVRHRMSDLGLRIGDAALYDTKYGPLSPLPIFMDGWWRGSWIRERRLWDGKLDKPWLLTVS VLAELFDSNPEEIAGIPSIEIEPGASKLGYMLRKMIKTGEESLKEKREYGHLSDYILWALEVIEVITRRIRDLVLDKPSL ETALNFWVIGAVLSSRNVSKVTVISDSVDLEIPKSSVEIPLPYGINIQGSSSITSTLYVIAHAMVHRGIDEDQLLEHFNI QTVCALWIEENMHKKMIKKGLEELKHGFEKLLKKSKWELELEDLGIDDPEAFFHEVSKKLAEIVTNVSTAFETIQDKPEE IARNLLSVDEEIRLGDEVIPPEEYDPKWRQSQRVKQHVKGTLESIDTEKLAEDALKTVGRLVGGSKGEEMAETAAKLATE VVKRGLDMVSESSGNRKERSVLGELIEAVVKEVMDGARKRK >Mature_440_residues PECVPLSPTDRFYDKVKSYVRHRMSDLGLRIGDAALYDTKYGPLSPLPIFMDGWWRGSWIRERRLWDGKLDKPWLLTVSV LAELFDSNPEEIAGIPSIEIEPGASKLGYMLRKMIKTGEESLKEKREYGHLSDYILWALEVIEVITRRIRDLVLDKPSLE TALNFWVIGAVLSSRNVSKVTVISDSVDLEIPKSSVEIPLPYGINIQGSSSITSTLYVIAHAMVHRGIDEDQLLEHFNIQ TVCALWIEENMHKKMIKKGLEELKHGFEKLLKKSKWELELEDLGIDDPEAFFHEVSKKLAEIVTNVSTAFETIQDKPEEI ARNLLSVDEEIRLGDEVIPPEEYDPKWRQSQRVKQHVKGTLESIDTEKLAEDALKTVGRLVGGSKGEEMAETAAKLATEV VKRGLDMVSESSGNRKERSVLGELIEAVVKEVMDGARKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50007; Mature: 49876
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPECVPLSPTDRFYDKVKSYVRHRMSDLGLRIGDAALYDTKYGPLSPLPIFMDGWWRGSW CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCHHHCCCCCCCCCCCCCEECCCCCCHH IRERRLWDGKLDKPWLLTVSVLAELFDSNPEEIAGIPSIEIEPGASKLGYMLRKMIKTGE HHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEECCCHHHHHHHHHHHHHHHH ESLKEKREYGHLSDYILWALEVIEVITRRIRDLVLDKPSLETALNFWVIGAVLSSRNVSK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCE VTVISDSVDLEIPKSSVEIPLPYGINIQGSSSITSTLYVIAHAMVHRGIDEDQLLEHFNI EEEEECCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCH QTVCALWIEENMHKKMIKKGLEELKHGFEKLLKKSKWELELEDLGIDDPEAFFHEVSKKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHHHHHHHH AEIVTNVSTAFETIQDKPEEIARNLLSVDEEIRLGDEVIPPEEYDPKWRQSQRVKQHVKG HHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH TLESIDTEKLAEDALKTVGRLVGGSKGEEMAETAAKLATEVVKRGLDMVSESSGNRKERS HHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VLGELIEAVVKEVMDGARKRK HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PECVPLSPTDRFYDKVKSYVRHRMSDLGLRIGDAALYDTKYGPLSPLPIFMDGWWRGSW CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCHHHCCCCCCCCCCCCCEECCCCCCHH IRERRLWDGKLDKPWLLTVSVLAELFDSNPEEIAGIPSIEIEPGASKLGYMLRKMIKTGE HHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEECCCHHHHHHHHHHHHHHHH ESLKEKREYGHLSDYILWALEVIEVITRRIRDLVLDKPSLETALNFWVIGAVLSSRNVSK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCE VTVISDSVDLEIPKSSVEIPLPYGINIQGSSSITSTLYVIAHAMVHRGIDEDQLLEHFNI EEEEECCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCH QTVCALWIEENMHKKMIKKGLEELKHGFEKLLKKSKWELELEDLGIDDPEAFFHEVSKKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHHHHHHHH AEIVTNVSTAFETIQDKPEEIARNLLSVDEEIRLGDEVIPPEEYDPKWRQSQRVKQHVKG HHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH TLESIDTEKLAEDALKTVGRLVGGSKGEEMAETAAKLATEVVKRGLDMVSESSGNRKERS HHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VLGELIEAVVKEVMDGARKRK HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA