| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094700
Identifier: 20094700
GI number: 20094700
Start: 1255904
End: 1257532
Strand: Direct
Name: 20094700
Synonym: MK1264
Alternate gene names: NA
Gene position: 1255904-1257532 (Clockwise)
Preceding gene: 20094699
Following gene: 20094701
Centisome position: 74.1
GC content: 58.69
Gene sequence:
>1629_bases GTGGATGCTGAGCACTGGGAAGTCCCGATTGTGCCGAAACCCGAGTTCCGGGAGGCACTGCAACGGTACATGATCTCCCG ACTCGAGGAGGTCGGCGTTGGCCCCAAAACCGTCGAACAAATTGTAAACCTTAATATCGAGAAGGTGGAGCCATGGAATG ACATCAAATCAAAGATAACTTATGAAATCCAATATAATTTGAAGCATTGCTGTTGCATGGTAGAGGACTTAAAAAAAGAT TTGAAACGTATCTACGGAGAGTTGAGGCTTGAGGACCTCTGCTCGTTCGGTGACGCTGCCCTGTGGTTACTCGGCGTCCG TAGAGCGGTGGTCGAGTTCATCCACGACCTCCTTCTCGAGCGACCGGACCTCACTAAGGCTGTTGACCTCTGGTTGGTCG GAAGGATGCTCGATGCGGGCGAACTCAAGGCGGCTACGGAGCTCCTGGAACTGAACGGGTACGAGGTTCCTCCGTCCCCA ACTCGAGTACCAGAGCTAAAAACTACCGAAAGAGTCCATAGGCTGGGTCACGTAATGACTGAAACGATACTCACGGCCCA CGCGCTCTCGAACAGGGTCGATAGCAGCTCCTTCGACGAAGCCGTTGGAAAGGTCAGGAACTGGTTCAAGGAGGCCCAGT CATCGCTGAGGAATGAAGTTCAGAAGGAGGATAGCTCGGAGCTAGTGGTGAAATTTATCGAAGGGTTGCGCGACACGCTG GAGGATCTTATCAGAAAGACGTTAGAGCACGGTAAACCCGAGCTTGAGGAGGTCAACTCTACTTTCGAGCTGTTGGGTAT CGACGATCTAGGTTCGTTTTTCAGCCGGGCGTGTGGTGAGTTCAAACGGGCGGTGGATTACCTCGTCGAGGTGGTCGAGT TCGACCCCGGACGAATGGCGAAGAACTTACTCCGAGCGAGTCCGGAGATAGAACTCGGGGATCGGACGCTGGAACCGGAA GTGTACGATCCGAGGTGGAGCATCTTCGAGCGAGACCTGAGCGAGCTCGACAGGATTACGAAGGAGATGATCGAAGAGCT GGTCACCGAGACCGATCGGTCTTCCTCCGAGCGCGAAGCCCCCCCGACCCACTGTCCGAGGTCGTGGACTCCGTCGTCAA GGAGGCGCTTGACAAACGCCGAGGGAACTCTTGAACCCAGTCCTACCCCCTATCGCTCGATGACTCCTAGGATCTCTCCC AGCGATCCTGTCGGAAAAAGGTCCCCGCTAGAACCGCGCCCGAACTCCCCGACGGCCGCGCATGCCTTAGTGGGTACCCT TGATACTGTTCTCGTTCCGACGACTTTACGCCCGGGATCGCGACCGAGCGCCACGTCTCACGGGGCGGTGGGCGTTGAGG GTACTCCCGGCCGACGAGCTGGAGGAGTGGCTGTCGGAACGACTGGAAAGCTTCGTGGGCGAGGTCGGCGAGTACTCGAT CGTGCTCGCGTGCGCGTTCTCCAGGCGCGTGGGGAGCGGGTTGCCCGCGAGCGACCTCGTGACGGCCATCCGGGAGCTAG ACCCCGGCCCGTGCCGGGTCATGCTGCTGTGGGGCGCCGGTACCACCGAGGTGGCGGACCCGCTGGAGGCCGTGCGGGCC GCGGAGGACCTGCGCGGTTGCGGCGATGA
Upstream 100 bases:
>100_bases TGGAGGAGGCCGTGAACGGGATCCTAGACGTCGGCTGATACCCGCCGAGGCAGTGACTAGAGGATCTCTCGGAGAGTTTA ACGGACTGGGGGCGGTGCCG
Downstream 100 bases:
>100_bases GGCCTGGATCGGCGTGCACCCGACGCGACCCTTCCACGGTAAGTTCCTCCGCGTGCTCCCGGAGGGTGAGGGCCCGGAGC TCTCGATCGCCTTCAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MDAEHWEVPIVPKPEFREALQRYMISRLEEVGVGPKTVEQIVNLNIEKVEPWNDIKSKITYEIQYNLKHCCCMVEDLKKD LKRIYGELRLEDLCSFGDAALWLLGVRRAVVEFIHDLLLERPDLTKAVDLWLVGRMLDAGELKAATELLELNGYEVPPSP TRVPELKTTERVHRLGHVMTETILTAHALSNRVDSSSFDEAVGKVRNWFKEAQSSLRNEVQKEDSSELVVKFIEGLRDTL EDLIRKTLEHGKPELEEVNSTFELLGIDDLGSFFSRACGEFKRAVDYLVEVVEFDPGRMAKNLLRASPEIELGDRTLEPE VYDPRWSIFERDLSELDRITKEMIEELVTETDRSSSEREAPPTHCPRSWTPSSRRRLTNAEGTLEPSPTPYRSMTPRISP SDPVGKRSPLEPRPNSPTAAHALVGTLDTVLVPTTLRPGSRPSATSHGAVGVEGTPGRRAGGVAVGTTGKLRGRGRRVLD RARVRVLQARGERVARERPRDGHPGARPRPVPGHAAVGRRYHRGGGPAGGRAGRGGPARLRR
Sequences:
>Translated_542_residues MDAEHWEVPIVPKPEFREALQRYMISRLEEVGVGPKTVEQIVNLNIEKVEPWNDIKSKITYEIQYNLKHCCCMVEDLKKD LKRIYGELRLEDLCSFGDAALWLLGVRRAVVEFIHDLLLERPDLTKAVDLWLVGRMLDAGELKAATELLELNGYEVPPSP TRVPELKTTERVHRLGHVMTETILTAHALSNRVDSSSFDEAVGKVRNWFKEAQSSLRNEVQKEDSSELVVKFIEGLRDTL EDLIRKTLEHGKPELEEVNSTFELLGIDDLGSFFSRACGEFKRAVDYLVEVVEFDPGRMAKNLLRASPEIELGDRTLEPE VYDPRWSIFERDLSELDRITKEMIEELVTETDRSSSEREAPPTHCPRSWTPSSRRRLTNAEGTLEPSPTPYRSMTPRISP SDPVGKRSPLEPRPNSPTAAHALVGTLDTVLVPTTLRPGSRPSATSHGAVGVEGTPGRRAGGVAVGTTGKLRGRGRRVLD RARVRVLQARGERVARERPRDGHPGARPRPVPGHAAVGRRYHRGGGPAGGRAGRGGPARLRR >Mature_542_residues MDAEHWEVPIVPKPEFREALQRYMISRLEEVGVGPKTVEQIVNLNIEKVEPWNDIKSKITYEIQYNLKHCCCMVEDLKKD LKRIYGELRLEDLCSFGDAALWLLGVRRAVVEFIHDLLLERPDLTKAVDLWLVGRMLDAGELKAATELLELNGYEVPPSP TRVPELKTTERVHRLGHVMTETILTAHALSNRVDSSSFDEAVGKVRNWFKEAQSSLRNEVQKEDSSELVVKFIEGLRDTL EDLIRKTLEHGKPELEEVNSTFELLGIDDLGSFFSRACGEFKRAVDYLVEVVEFDPGRMAKNLLRASPEIELGDRTLEPE VYDPRWSIFERDLSELDRITKEMIEELVTETDRSSSEREAPPTHCPRSWTPSSRRRLTNAEGTLEPSPTPYRSMTPRISP SDPVGKRSPLEPRPNSPTAAHALVGTLDTVLVPTTLRPGSRPSATSHGAVGVEGTPGRRAGGVAVGTTGKLRGRGRRVLD RARVRVLQARGERVARERPRDGHPGARPRPVPGHAAVGRRYHRGGGPAGGRAGRGGPARLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60673; Mature: 60673
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAEHWEVPIVPKPEFREALQRYMISRLEEVGVGPKTVEQIVNLNIEKVEPWNDIKSKIT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCEE YEIQYNLKHCCCMVEDLKKDLKRIYGELRLEDLCSFGDAALWLLGVRRAVVEFIHDLLLE EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC RPDLTKAVDLWLVGRMLDAGELKAATELLELNGYEVPPSPTRVPELKTTERVHRLGHVMT CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ETILTAHALSNRVDSSSFDEAVGKVRNWFKEAQSSLRNEVQKEDSSELVVKFIEGLRDTL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EDLIRKTLEHGKPELEEVNSTFELLGIDDLGSFFSRACGEFKRAVDYLVEVVEFDPGRMA HHHHHHHHHCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KNLLRASPEIELGDRTLEPEVYDPRWSIFERDLSELDRITKEMIEELVTETDRSSSEREA HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PPTHCPRSWTPSSRRRLTNAEGTLEPSPTPYRSMTPRISPSDPVGKRSPLEPRPNSPTAA CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH HALVGTLDTVLVPTTLRPGSRPSATSHGAVGVEGTPGRRAGGVAVGTTGKLRGRGRRVLD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHH RARVRVLQARGERVARERPRDGHPGARPRPVPGHAAVGRRYHRGGGPAGGRAGRGGPARL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCHHCC RR CC >Mature Secondary Structure MDAEHWEVPIVPKPEFREALQRYMISRLEEVGVGPKTVEQIVNLNIEKVEPWNDIKSKIT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCEE YEIQYNLKHCCCMVEDLKKDLKRIYGELRLEDLCSFGDAALWLLGVRRAVVEFIHDLLLE EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC RPDLTKAVDLWLVGRMLDAGELKAATELLELNGYEVPPSPTRVPELKTTERVHRLGHVMT CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ETILTAHALSNRVDSSSFDEAVGKVRNWFKEAQSSLRNEVQKEDSSELVVKFIEGLRDTL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EDLIRKTLEHGKPELEEVNSTFELLGIDDLGSFFSRACGEFKRAVDYLVEVVEFDPGRMA HHHHHHHHHCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KNLLRASPEIELGDRTLEPEVYDPRWSIFERDLSELDRITKEMIEELVTETDRSSSEREA HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PPTHCPRSWTPSSRRRLTNAEGTLEPSPTPYRSMTPRISPSDPVGKRSPLEPRPNSPTAA CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH HALVGTLDTVLVPTTLRPGSRPSATSHGAVGVEGTPGRRAGGVAVGTTGKLRGRGRRVLD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHH RARVRVLQARGERVARERPRDGHPGARPRPVPGHAAVGRRYHRGGGPAGGRAGRGGPARL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCHHCC RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA