| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094698
Identifier: 20094698
GI number: 20094698
Start: 1254244
End: 1255155
Strand: Direct
Name: 20094698
Synonym: MK1262
Alternate gene names: NA
Gene position: 1254244-1255155 (Clockwise)
Preceding gene: 20094697
Following gene: 20094699
Centisome position: 74.0
GC content: 59.21
Gene sequence:
>912_bases TTGGCTAAGGTCAGTAAGGTGTTCGTGGTCGGGTTCACGGCCAGGAAGGGAGGTACCGGGAAGACGACCTGCTCGTTCAA CGTAGGGTTCGAGTTCGCCAGGAGGAGGAAGTGGAAGGGTGTGAAGAGCCATCCGGTGTTCTTCGTGGACGTCGATCCGC AGGCGATCGGTAAGGAGTCGGAGCGGGCGGCCACTACGCTTACCGACCTCTTCAGGATCGGGCCTTTCGACCTAACACCC CTCAAACTAGAGGGCGACAGGATGGTCGAGGCCAGACGCGTCACGAAGGAGACCGTCGAGAGGACCGGTGGTTTCGAGTT GTTCCACGTGAAATACTCGCCGGATCCCGAGGAGTTCGACAATGCAGATCCTATGTGCTCGGTTCACGATAAGGTGTTCC TAGCTCACCTCAGCACGCACATCTCGGAGTCGCCGGGTATGATGGATTTCGGGAAGTTCCTGAACGCCATCACGGGGGCC GGGTTCGACGGTATCGTCGTCCTCGACACCCCTCCGCTGAACGTCAGGACGACCTTCGTCCTCAACGCGCTGGAACACTG TGATTTAGTGGTTCCAGTCCTGAACCCGGAGTCCTACGATCAGATCCCCGACTTCATCAGGCGACACCCTGTGCGGTTCA TCGTGCTCAACCAGATGCTGAAGGGTAGGACGAAGGAGGCGGAGAAGATCCGCAGGGAGATCGAGGGTTACCTCAAGAGG ACGACGTTGGACGAGGACGACGTCATCTGGATCCCTAGCAACGACCAGCTCCGCTCGTGCACGAACACCGGGGTTCCGGC TAGGTGTAGGAACCCCAAGCCCCAGGCCGTCACGCCCAAGTTCCATCACATAGCCTGGAGGATTGAAGTGGAGCGGGAGC GGCGGAGCAAGATCAGCGAGATCAGGCTCTGA
Upstream 100 bases:
>100_bases ACTCGACTTGAGGGAAAGCGCGGCCCCGTGTGGGACGGTGGTTTAATTTTCTCGGCCCTCATGGTACCAATTAGGAGAAG TTGTTGGGGATTGTCTTGTT
Downstream 100 bases:
>100_bases GCGGGGGAGCGCCGGTGTTCGAGCTGGCCGTCAAGGCCTTCGGTCTCCCGGATTCGACCGTGACCCACGCCAAGCGCGGC CTCCAGATCATGGACGACCG
Product: chromosome partitioning ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAKVSKVFVVGFTARKGGTGKTTCSFNVGFEFARRRKWKGVKSHPVFFVDVDPQAIGKESERAATTLTDLFRIGPFDLTP LKLEGDRMVEARRVTKETVERTGGFELFHVKYSPDPEEFDNADPMCSVHDKVFLAHLSTHISESPGMMDFGKFLNAITGA GFDGIVVLDTPPLNVRTTFVLNALEHCDLVVPVLNPESYDQIPDFIRRHPVRFIVLNQMLKGRTKEAEKIRREIEGYLKR TTLDEDDVIWIPSNDQLRSCTNTGVPARCRNPKPQAVTPKFHHIAWRIEVERERRSKISEIRL
Sequences:
>Translated_303_residues MAKVSKVFVVGFTARKGGTGKTTCSFNVGFEFARRRKWKGVKSHPVFFVDVDPQAIGKESERAATTLTDLFRIGPFDLTP LKLEGDRMVEARRVTKETVERTGGFELFHVKYSPDPEEFDNADPMCSVHDKVFLAHLSTHISESPGMMDFGKFLNAITGA GFDGIVVLDTPPLNVRTTFVLNALEHCDLVVPVLNPESYDQIPDFIRRHPVRFIVLNQMLKGRTKEAEKIRREIEGYLKR TTLDEDDVIWIPSNDQLRSCTNTGVPARCRNPKPQAVTPKFHHIAWRIEVERERRSKISEIRL >Mature_302_residues AKVSKVFVVGFTARKGGTGKTTCSFNVGFEFARRRKWKGVKSHPVFFVDVDPQAIGKESERAATTLTDLFRIGPFDLTPL KLEGDRMVEARRVTKETVERTGGFELFHVKYSPDPEEFDNADPMCSVHDKVFLAHLSTHISESPGMMDFGKFLNAITGAG FDGIVVLDTPPLNVRTTFVLNALEHCDLVVPVLNPESYDQIPDFIRRHPVRFIVLNQMLKGRTKEAEKIRREIEGYLKRT TLDEDDVIWIPSNDQLRSCTNTGVPARCRNPKPQAVTPKFHHIAWRIEVERERRSKISEIRL
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34453; Mature: 34322
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVSKVFVVGFTARKGGTGKTTCSFNVGFEFARRRKWKGVKSHPVFFVDVDPQAIGKES CCCCEEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEECCHHHHCCCH ERAATTLTDLFRIGPFDLTPLKLEGDRMVEARRVTKETVERTGGFELFHVKYSPDPEEFD HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHC NADPMCSVHDKVFLAHLSTHISESPGMMDFGKFLNAITGAGFDGIVVLDTPPLNVRTTFV CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHH LNALEHCDLVVPVLNPESYDQIPDFIRRHPVRFIVLNQMLKGRTKEAEKIRREIEGYLKR HHHHHHCCEEEEECCCCCHHHHHHHHHHCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHH TTLDEDDVIWIPSNDQLRSCTNTGVPARCRNPKPQAVTPKFHHIAWRIEVERERRSKISE CCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHH IRL CCC >Mature Secondary Structure AKVSKVFVVGFTARKGGTGKTTCSFNVGFEFARRRKWKGVKSHPVFFVDVDPQAIGKES CCCEEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEECCHHHHCCCH ERAATTLTDLFRIGPFDLTPLKLEGDRMVEARRVTKETVERTGGFELFHVKYSPDPEEFD HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHC NADPMCSVHDKVFLAHLSTHISESPGMMDFGKFLNAITGAGFDGIVVLDTPPLNVRTTFV CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHH LNALEHCDLVVPVLNPESYDQIPDFIRRHPVRFIVLNQMLKGRTKEAEKIRREIEGYLKR HHHHHHCCEEEEECCCCCHHHHHHHHHHCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHH TTLDEDDVIWIPSNDQLRSCTNTGVPARCRNPKPQAVTPKFHHIAWRIEVERERRSKISE CCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHH IRL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA