| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094694
Identifier: 20094694
GI number: 20094694
Start: 1244552
End: 1245679
Strand: Direct
Name: 20094694
Synonym: MK1258
Alternate gene names: NA
Gene position: 1244552-1245679 (Clockwise)
Preceding gene: 20094691
Following gene: 20094696
Centisome position: 73.43
GC content: 66.31
Gene sequence:
>1128_bases CTGGGGATCCAACGACTGGCGCACAACTCCCCGTACAGTCACCACCGGGGTGTGAAGTGCTCGGGGGACGGGGGCGTGCT CCTTCGTCCCGCGGATTCGTGGGCGGGCGTGCTGGTGGATACGGGGAGCACGATCGTCGCCGTGGACGCGGGCCCCAACC CGTGGCACGCGGAGGACACCGACTACCTCCTTCTCACCCACGCCCACCTCGATCACGTGGCCTCCCTGGACAGGTACTCG AGGAACGGTGCGAAAGTACTGTGCCCGGGTGACGTGCGCGACGACTTGGGGCTCGTGGACAGCGCGGTGGGCGTGAAGAA GGTGAAGTCGATGCTCTACGACGTGATCGTCCACCCCATCCCCGTAGAACACACGTGCAGCGCGTACGCCTACGTCCTGG ACTTGGAGGAGTGTAACGTCCTGGTCACGGGTGATTGGCACGTGGGACCGCGCACGATCGATGGTGAGATCAAACCCCTC TGGAAGGCCGTGCGTGAGGTCGTCGGGGGCGAGGGGGTCGACGTGATCGTCTCGGAGGCCACGCGGGCCCTCGTGGACGC TCCCGAGCTGGGCGGGAACGAGAGGGTTTTCGAGTACGCCCTGTCCCTACACGACCCGCGGGACGTCCTCGCCTTCCTCC AACCCACGGACCTCGAGATCATCGACACGGCCTTCCGAGTGGCCTCGGACCTGGGACTCGACGTCGTCGTGGACTCGGAA ACCGATCGGAAGCTCAAGTTCTTGGAGAGGCGTGGGGACGTGGAGTGGGAGTACGACGTGGCCGACGAGCCCCTGGTGCG CTCCCTGTACCTGACCGTGAGCTGGGAGAAGGCGAGGGAGTTGGCCGAGGCGGGGCTCGTGGAGGCCGTCGTGGGTAACT GGGCGACGGTCCACCATCTGAGGCGTCGAGTCGGAGTGAAGTACGCGTACGTGATCCCCAGGTCCGGGCACGCGTCCCGA CCCGAGATAACCCGACTGATCACCGAGCTGGAACCCTCGTGCCTCGTGTTCAGACACCGGTCCGGGGACGCCACCCGCCT CGAACGGTACTACTCCAGGTTCGTGGACGAGGTGAGGGTGTGGGTGGGGAGAGGGTGCAGGGACGAGTCCCTCGAGCTCC CGCCCTGA
Upstream 100 bases:
>100_bases ACGATCACGTACTTCCCCACGGGCTGAGGTACCGCTCCCGCAACGTTTAGAAGAGTTACTAAATAAACATTGTGGAGCGA GGTGTTTTTTCTCGGCTGCG
Downstream 100 bases:
>100_bases CTCATCCGCCCAGCAACCTCCGCCTCTGCTTCACCTCCCTCATCTTCTTCAGGACGAGGGCGGCGTACTTCAGCTCCGGG TAACGCTCGTCGAGTTCTCC
Product: fused hydrolase/uncharacterized domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGIQRLAHNSPYSHHRGVKCSGDGGVLLRPADSWAGVLVDTGSTIVAVDAGPNPWHAEDTDYLLLTHAHLDHVASLDRYS RNGAKVLCPGDVRDDLGLVDSAVGVKKVKSMLYDVIVHPIPVEHTCSAYAYVLDLEECNVLVTGDWHVGPRTIDGEIKPL WKAVREVVGGEGVDVIVSEATRALVDAPELGGNERVFEYALSLHDPRDVLAFLQPTDLEIIDTAFRVASDLGLDVVVDSE TDRKLKFLERRGDVEWEYDVADEPLVRSLYLTVSWEKARELAEAGLVEAVVGNWATVHHLRRRVGVKYAYVIPRSGHASR PEITRLITELEPSCLVFRHRSGDATRLERYYSRFVDEVRVWVGRGCRDESLELPP
Sequences:
>Translated_375_residues MGIQRLAHNSPYSHHRGVKCSGDGGVLLRPADSWAGVLVDTGSTIVAVDAGPNPWHAEDTDYLLLTHAHLDHVASLDRYS RNGAKVLCPGDVRDDLGLVDSAVGVKKVKSMLYDVIVHPIPVEHTCSAYAYVLDLEECNVLVTGDWHVGPRTIDGEIKPL WKAVREVVGGEGVDVIVSEATRALVDAPELGGNERVFEYALSLHDPRDVLAFLQPTDLEIIDTAFRVASDLGLDVVVDSE TDRKLKFLERRGDVEWEYDVADEPLVRSLYLTVSWEKARELAEAGLVEAVVGNWATVHHLRRRVGVKYAYVIPRSGHASR PEITRLITELEPSCLVFRHRSGDATRLERYYSRFVDEVRVWVGRGCRDESLELPP >Mature_374_residues GIQRLAHNSPYSHHRGVKCSGDGGVLLRPADSWAGVLVDTGSTIVAVDAGPNPWHAEDTDYLLLTHAHLDHVASLDRYSR NGAKVLCPGDVRDDLGLVDSAVGVKKVKSMLYDVIVHPIPVEHTCSAYAYVLDLEECNVLVTGDWHVGPRTIDGEIKPLW KAVREVVGGEGVDVIVSEATRALVDAPELGGNERVFEYALSLHDPRDVLAFLQPTDLEIIDTAFRVASDLGLDVVVDSET DRKLKFLERRGDVEWEYDVADEPLVRSLYLTVSWEKARELAEAGLVEAVVGNWATVHHLRRRVGVKYAYVIPRSGHASRP EITRLITELEPSCLVFRHRSGDATRLERYYSRFVDEVRVWVGRGCRDESLELPP
Specific function: Unknown
COG id: COG0595
COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41681; Mature: 41549
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIQRLAHNSPYSHHRGVKCSGDGGVLLRPADSWAGVLVDTGSTIVAVDAGPNPWHAEDT CCCHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCC DYLLLTHAHLDHVASLDRYSRNGAKVLCPGDVRDDLGLVDSAVGVKKVKSMLYDVIVHPI CEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PVEHTCSAYAYVLDLEECNVLVTGDWHVGPRTIDGEIKPLWKAVREVVGGEGVDVIVSEA CCCCCCCEEEEEEEHHHCCEEEECCCCCCCEECCCCHHHHHHHHHHHHCCCCCEEHHHHH TRALVDAPELGGNERVFEYALSLHDPRDVLAFLQPTDLEIIDTAFRVASDLGLDVVVDSE HHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECC TDRKLKFLERRGDVEWEYDVADEPLVRSLYLTVSWEKARELAEAGLVEAVVGNWATVHHL CCHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHH RRRVGVKYAYVIPRSGHASRPEITRLITELEPSCLVFRHRSGDATRLERYYSRFVDEVRV HHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH WVGRGCRDESLELPP HHCCCCCCCCCCCCC >Mature Secondary Structure GIQRLAHNSPYSHHRGVKCSGDGGVLLRPADSWAGVLVDTGSTIVAVDAGPNPWHAEDT CCHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCC DYLLLTHAHLDHVASLDRYSRNGAKVLCPGDVRDDLGLVDSAVGVKKVKSMLYDVIVHPI CEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PVEHTCSAYAYVLDLEECNVLVTGDWHVGPRTIDGEIKPLWKAVREVVGGEGVDVIVSEA CCCCCCCEEEEEEEHHHCCEEEECCCCCCCEECCCCHHHHHHHHHHHHCCCCCEEHHHHH TRALVDAPELGGNERVFEYALSLHDPRDVLAFLQPTDLEIIDTAFRVASDLGLDVVVDSE HHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECC TDRKLKFLERRGDVEWEYDVADEPLVRSLYLTVSWEKARELAEAGLVEAVVGNWATVHHL CCHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHH RRRVGVKYAYVIPRSGHASRPEITRLITELEPSCLVFRHRSGDATRLERYYSRFVDEVRV HHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH WVGRGCRDESLELPP HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA