| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094590
Identifier: 20094590
GI number: 20094590
Start: 1139945
End: 1141204
Strand: Direct
Name: 20094590
Synonym: MK1154
Alternate gene names: NA
Gene position: 1139945-1141204 (Clockwise)
Preceding gene: 20094589
Following gene: 20094591
Centisome position: 67.25
GC content: 66.27
Gene sequence:
>1260_bases TTGCGCGGCCTAACGCGGTTCGCGGAGCGGAGACTTCGATGGTACAGGCGGGCCTACTGGACGCTCTGCCCGGCCGTCGT CCTCTTCACGGGTTTGGGGTGGGAAGAGGCGGGGCTATTGCTGATGGGTTTCGCGGCCTTCGCGGGGGCGTTCTACGGGA TCTACCGGGAGGAAACTGAGGGAACGTTCCCCCGATCCGAGCACTCACGCCGGGTCGGTCGCACCCTGATGTGGTACCCC ACCGCCTCGTTCGACCGCGTGCTGGGAGGCCTCACCCCGACTACCTTCCTGCCACTGTTTCCCGCCCTCCTCTACTTCAT CACTTCGGTCGCCCGTCACCCCGACTTTCTCCACTCTCGAATCGCGGTAGCCCTCTTCTTCCTCGGCCCTCTGCCAGTCC TACTCTACCTGGTACGGTACGAGGTCGCTTCGGCCCTCGGTTGCGTCCGGGTCCTCCGCGTTCGCGGTTCCCGGGCCCTC CTCCTCTCCCTCGGGTACTGCGAGGCCGAGTTGGTTACGGATGGAAACGTGAAGGTTTCCGGGTTTCGTGAGCTCGGTTC TTACCCGGTCGAGTACGGGGGCTTACCCGGGGACCCGCCCGGGGACTTGAGGATCCGCGTTGGTTACTTCCCGCCGGGGA AGCACGAGGTCGAGGTCCGGGATTGTGACTTCCTCTTCCTCAGGACCCGGGGCGTGTGCATGCTCTACGACTCCCGTGGA CTGCCGGAGGACCGGGAGGGGGCGTTCCACCTAGCCCGGTGGTGGGAGAAGTTCTCGATGGCGTACGCGGCCCTGTGCCT GAAGGAGGGCGGACCGCCGGATCCGGGTGAGGCCGAGGCCCTGGCCGCGGGAGCCGGTGACAACGCCCGCCGGGCCCTGA CCGTGACCTACTTCGGGGTCAAGTTCCCGGTCGGGAAGCTGGTCGCGAGCGAGGAGGCCATGTTAGGGGTCGTCCTCGGG ATGATCCCGATAGCGACCCTGGTGCGCGATCTCCTCCCGCCCGACCTGTCGCTGCTATCCGCACCGATCGCCGCACCGCT CGCCGGGGTACTCCTCGCGTTACCCATCGCCTGGCGCAACCGACGGGTGGTCAGGACCGGGCGGTGGTACCGTCTCCTAC TCCGAGGGGATCATGTGGAGAAGCTGCTCCCCAGACTGTTGGGGGAAGATTTGTGGTCCCGGCGGGGTGGGATGATCACG ACCCTGTGGAAGGTGTTCGACGTCCTCGAGCGGGAGCGTCGACAACATCCACCGTACTGA
Upstream 100 bases:
>100_bases CCTTACTACTCCTTTCCTTTCCGTATTCTAATTGAAGCACCGGGTCCGCCGGTTCCCCGATCCCATGAGATCGAGGGTGA CCGACGGCGGGGAAGCGGCG
Downstream 100 bases:
>100_bases CCTACACCTGGTGGTACTCAGAACCACGTCCCGAGTCGTTCCGATTTCTAGCCCATGGAGTCGACGTCACGGGGGAGGAG TAACGCAAGGGAGATCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MRGLTRFAERRLRWYRRAYWTLCPAVVLFTGLGWEEAGLLLMGFAAFAGAFYGIYREETEGTFPRSEHSRRVGRTLMWYP TASFDRVLGGLTPTTFLPLFPALLYFITSVARHPDFLHSRIAVALFFLGPLPVLLYLVRYEVASALGCVRVLRVRGSRAL LLSLGYCEAELVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTRGVCMLYDSRG LPEDREGAFHLARWWEKFSMAYAALCLKEGGPPDPGEAEALAAGAGDNARRALTVTYFGVKFPVGKLVASEEAMLGVVLG MIPIATLVRDLLPPDLSLLSAPIAAPLAGVLLALPIAWRNRRVVRTGRWYRLLLRGDHVEKLLPRLLGEDLWSRRGGMIT TLWKVFDVLERERRQHPPY
Sequences:
>Translated_419_residues MRGLTRFAERRLRWYRRAYWTLCPAVVLFTGLGWEEAGLLLMGFAAFAGAFYGIYREETEGTFPRSEHSRRVGRTLMWYP TASFDRVLGGLTPTTFLPLFPALLYFITSVARHPDFLHSRIAVALFFLGPLPVLLYLVRYEVASALGCVRVLRVRGSRAL LLSLGYCEAELVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTRGVCMLYDSRG LPEDREGAFHLARWWEKFSMAYAALCLKEGGPPDPGEAEALAAGAGDNARRALTVTYFGVKFPVGKLVASEEAMLGVVLG MIPIATLVRDLLPPDLSLLSAPIAAPLAGVLLALPIAWRNRRVVRTGRWYRLLLRGDHVEKLLPRLLGEDLWSRRGGMIT TLWKVFDVLERERRQHPPY >Mature_419_residues MRGLTRFAERRLRWYRRAYWTLCPAVVLFTGLGWEEAGLLLMGFAAFAGAFYGIYREETEGTFPRSEHSRRVGRTLMWYP TASFDRVLGGLTPTTFLPLFPALLYFITSVARHPDFLHSRIAVALFFLGPLPVLLYLVRYEVASALGCVRVLRVRGSRAL LLSLGYCEAELVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTRGVCMLYDSRG LPEDREGAFHLARWWEKFSMAYAALCLKEGGPPDPGEAEALAAGAGDNARRALTVTYFGVKFPVGKLVASEEAMLGVVLG MIPIATLVRDLLPPDLSLLSAPIAAPLAGVLLALPIAWRNRRVVRTGRWYRLLLRGDHVEKLLPRLLGEDLWSRRGGMIT TLWKVFDVLERERRQHPPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47004; Mature: 47004
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLTRFAERRLRWYRRAYWTLCPAVVLFTGLGWEEAGLLLMGFAAFAGAFYGIYREETE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC GTFPRSEHSRRVGRTLMWYPTASFDRVLGGLTPTTFLPLFPALLYFITSVARHPDFLHSR CCCCCCHHHHHHCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH IAVALFFLGPLPVLLYLVRYEVASALGCVRVLRVRGSRALLLSLGYCEAELVTDGNVKVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEE GFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTRGVCMLYDSRG CHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCEEEEECCCC LPEDREGAFHLARWWEKFSMAYAALCLKEGGPPDPGEAEALAAGAGDNARRALTVTYFGV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCCCCEEEEEEEEEE KFPVGKLVASEEAMLGVVLGMIPIATLVRDLLPPDLSLLSAPIAAPLAGVLLALPIAWRN ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RRVVRTGRWYRLLLRGDHVEKLLPRLLGEDLWSRRGGMITTLWKVFDVLERERRQHPPY CEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRGLTRFAERRLRWYRRAYWTLCPAVVLFTGLGWEEAGLLLMGFAAFAGAFYGIYREETE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC GTFPRSEHSRRVGRTLMWYPTASFDRVLGGLTPTTFLPLFPALLYFITSVARHPDFLHSR CCCCCCHHHHHHCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH IAVALFFLGPLPVLLYLVRYEVASALGCVRVLRVRGSRALLLSLGYCEAELVTDGNVKVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEE GFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTRGVCMLYDSRG CHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCEEEEECCCC LPEDREGAFHLARWWEKFSMAYAALCLKEGGPPDPGEAEALAAGAGDNARRALTVTYFGV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCCCCEEEEEEEEEE KFPVGKLVASEEAMLGVVLGMIPIATLVRDLLPPDLSLLSAPIAAPLAGVLLALPIAWRN ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RRVVRTGRWYRLLLRGDHVEKLLPRLLGEDLWSRRGGMITTLWKVFDVLERERRQHPPY CEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA