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The map label for this gene is ydaO [C]

Identifier: 20094539

GI number: 20094539

Start: 1073510

End: 1074421

Strand: Direct

Name: ydaO [C]

Synonym: MK1103

Alternate gene names: 20094539

Gene position: 1073510-1074421 (Clockwise)

Preceding gene: 20094537

Following gene: 20094542

Centisome position: 63.34

GC content: 66.56

Gene sequence:

>912_bases
TTGCGTTGTACGCGCTGCGGCGAACGGAACGCCGAGTACGAGCGTCCGTACGCGGGTGACGCGGTTTGCGGGCGGTGTTT
GGTCGAACTGGTTCGGGATAGGGTGTTCCGCGAGATCAGACGGTGGAGGTGGTTCCGACCGGGACAGCGGATCGTGGTGG
CCCTTTCGGGGGGTAAAGATAGCTCCCTGGCCCTACGGCTCGTTACGGAGTACGTGGAACCGCTGCCGGAGGTCGAGGTG
ATCGCGTTAACGGTGGACGAGGGGATCTCCGGGTTTCGGGACGCGTGTCTGCGGGCGGCGGAGCGGGTCGCGGACGAGCT
CGACGTGGAGCACGAGGTCGTCTCGTTCGAGGAGGAGTACGGGTTCGCGCTGGAGGAGGTCGTGGAAGACGTGGACGTAT
CCGCGTGCACGTTGTGTGGTGTCCTGCGACGACGGTTGCTGAACAGGCGGGCGCGGGAGCTGGGAGCGGATGTCGTGGTA
ACGGGCCACAACCTGGACGACGAGGCGCAAGCCGCCCTGATGAACTTCGTGAAGGCCGACCTGGCGCAGCTGGCGCGGCT
ACACCCGGAGGTGAGGCCGGAGGACGACCTGATCGTGCCCAGGGTGAAGCCGCTACGGGGGGTACCGGAGCGTGAGGTGC
GATGGGTGGCGGAAGAGCTCGGTCTGCCGTTCCACGCGGACCCGTGCCCGTACGCGCGCTTCTCGGTGCGGTCGTTCTTC
AGGGAGATACTCGATGAAATGGAGGAGCGGCTGCCGGACGTGAAGTTCGGGTTGGTGCGGGCGTTGGACAGGGCGGGTCC
GGTGCTGGCGGAGGCGTTTCTGGAGGAGGGACTCGGGCGTTGCGAGCGGTGTGGCGAGCCGGCGGCTGGGAAGCTCTGTA
AGGCGTGTGAACTGCTGGAGCGGTTGGGTTAG

Upstream 100 bases:

>100_bases
TACAACCCCTCCCCATCGCCGGCGGGTACGTATACTCGCGTTAGAGTTTAACCGATTCCGCCCATCGTTTCGTTCGTCGT
AACGACAGGGGGAGGGTTCG

Downstream 100 bases:

>100_bases
TCGGAGAAGGCCTGCTCGATGCTTTCGATCAGGTCGCGCTCGAGACGGCGGTGAGCACGGAAATGGCGGTTGGGGTCCTG
AACGACGGTGTACCACCAGT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRCTRCGERNAEYERPYAGDAVCGRCLVELVRDRVFREIRRWRWFRPGQRIVVALSGGKDSSLALRLVTEYVEPLPEVEV
IALTVDEGISGFRDACLRAAERVADELDVEHEVVSFEEEYGFALEEVVEDVDVSACTLCGVLRRRLLNRRARELGADVVV
TGHNLDDEAQAALMNFVKADLAQLARLHPEVRPEDDLIVPRVKPLRGVPEREVRWVAEELGLPFHADPCPYARFSVRSFF
REILDEMEERLPDVKFGLVRALDRAGPVLAEAFLEEGLGRCERCGEPAAGKLCKACELLERLG

Sequences:

>Translated_303_residues
MRCTRCGERNAEYERPYAGDAVCGRCLVELVRDRVFREIRRWRWFRPGQRIVVALSGGKDSSLALRLVTEYVEPLPEVEV
IALTVDEGISGFRDACLRAAERVADELDVEHEVVSFEEEYGFALEEVVEDVDVSACTLCGVLRRRLLNRRARELGADVVV
TGHNLDDEAQAALMNFVKADLAQLARLHPEVRPEDDLIVPRVKPLRGVPEREVRWVAEELGLPFHADPCPYARFSVRSFF
REILDEMEERLPDVKFGLVRALDRAGPVLAEAFLEEGLGRCERCGEPAAGKLCKACELLERLG
>Mature_303_residues
MRCTRCGERNAEYERPYAGDAVCGRCLVELVRDRVFREIRRWRWFRPGQRIVVALSGGKDSSLALRLVTEYVEPLPEVEV
IALTVDEGISGFRDACLRAAERVADELDVEHEVVSFEEEYGFALEEVVEDVDVSACTLCGVLRRRLLNRRARELGADVVV
TGHNLDDEAQAALMNFVKADLAQLARLHPEVRPEDDLIVPRVKPLRGVPEREVRWVAEELGLPFHADPCPYARFSVRSFF
REILDEMEERLPDVKFGLVRALDRAGPVLAEAFLEEGLGRCERCGEPAAGKLCKACELLERLG

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=306, Percent_Identity=35.6209150326797, Blast_Score=159, Evalue=2e-39,
Organism=Escherichia coli, GI1787606, Length=195, Percent_Identity=28.7179487179487, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17540090, Length=296, Percent_Identity=34.4594594594595, Blast_Score=155, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6321227, Length=153, Percent_Identity=30.718954248366, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24651972, Length=304, Percent_Identity=33.5526315789474, Blast_Score=171, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 34219; Mature: 34219

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCTRCGERNAEYERPYAGDAVCGRCLVELVRDRVFREIRRWRWFRPGQRIVVALSGGKD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
SSLALRLVTEYVEPLPEVEVIALTVDEGISGFRDACLRAAERVADELDVEHEVVSFEEEY
HHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GFALEEVVEDVDVSACTLCGVLRRRLLNRRARELGADVVVTGHNLDDEAQAALMNFVKAD
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
LAQLARLHPEVRPEDDLIVPRVKPLRGVPEREVRWVAEELGLPFHADPCPYARFSVRSFF
HHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
REILDEMEERLPDVKFGLVRALDRAGPVLAEAFLEEGLGRCERCGEPAAGKLCKACELLE
HHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RLG
HCC
>Mature Secondary Structure
MRCTRCGERNAEYERPYAGDAVCGRCLVELVRDRVFREIRRWRWFRPGQRIVVALSGGKD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
SSLALRLVTEYVEPLPEVEVIALTVDEGISGFRDACLRAAERVADELDVEHEVVSFEEEY
HHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GFALEEVVEDVDVSACTLCGVLRRRLLNRRARELGADVVVTGHNLDDEAQAALMNFVKAD
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
LAQLARLHPEVRPEDDLIVPRVKPLRGVPEREVRWVAEELGLPFHADPCPYARFSVRSFF
HHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
REILDEMEERLPDVKFGLVRALDRAGPVLAEAFLEEGLGRCERCGEPAAGKLCKACELLE
HHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RLG
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]