Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094249

Identifier: 20094249

GI number: 20094249

Start: 773691

End: 774935

Strand: Reverse

Name: 20094249

Synonym: MK0813

Alternate gene names: NA

Gene position: 774935-773691 (Counterclockwise)

Preceding gene: 20094250

Following gene: 20094248

Centisome position: 45.72

GC content: 59.04

Gene sequence:

>1245_bases
ATGAGACGACAGTTACCCCTGGAACCCGTGGCAGCCGAGAAGGTAGAGGAGGAGTATGAGCTGGTAACCTTGCTCGTGTG
TGACAATTGCGATTACTTCGAATTCAAACCCCACGACCGTGAGGTAGTATACGAGCGGAAGGGTAAGTGCCCTAAATGTG
GTGGGACGTTACTAGTCGAGGGCGTGTTCCGTACGGATGCCGACCCGTCGATGTTTCCATCGTATAAAGACGTTAAGAGT
GTTGAAAGGGCCCTCGAAAGTGCGGGATACGAGGTGAAGGAGTTCCGTGTCCGGGAGGACGGTTCGGTCGTTTTCCACTA
CGAGCGGAAGGGAGACGCGCATCGCCTGGCTAGGAAGCTTGCTGAGATGAAATTCACAGCGGAACCGGAGGGGAAGGCCG
GTAGGCTGGTCGTACAGCGTTTCGAAGTTCCCGAACAGGAGCCGGGCTGGTTGGCTCTGCTGGGGCTTTCGGTTCCGGTA
TTCGCGTACTTGGGCGGATGGTTGGCGTTCGGCTCGACCTGGGCCGCGGTGGAGTTCGCACTCGCGTTCTCGGCGATTTA
CTTCGGCAAGGAGATCGCGAAGCTCTGGGTAGCGAAGGTGGAAGGCCTCAGACCGCGCCTGCCGTTTTTCCTCGCGGTCC
CTCCCTTCCCAGGGGCATTCTCCTCGGTGATTCGCTCGGAAGTTCGACCTATGCTGGTTGAATCGTTGTGCCGGGTGGGC
GTAGCCGGTCTGGTGGCCGGGTTTCTACTATCCACCGCGATGTTCCTCCTAGGTTCCGCGTTCGACCATACGCCCGTCCG
AATGCTCGTGTGGCACAACCCGTGGACGTTGCTCCTATCGCGCGAACTCGGAATCGTCGCGAACCCGATCACGTTGGCTG
GATGGGCGGGACTCGTCATCACCTGGCTCTCGGCCCTGCCGGTGTACCCGCTCGAAGGAGGATACATCCTGCGATATTAC
TACGATACCCGCACCGTCAAGTGGTTCTCTGTGGCGTCGGCGTTCATCCAAGGCTGGCTGCACTGGTACCACATAGCGGT
GGCGACCGTGATCGTGCTGGTTAAGATAACGGCGAAACTACCGTCCGACCGCTCGTTCTTGGACGATGACGAGAGCAAGA
GCTGGCTACCCGCCTTGCTGCTGGTGGCCCTGTTCGTCCTGCTGATATCACCGGCACCGTTCGGGCTGTGGCCCTTAGAA
CACTCGAAGGTACCACACAACCTGCAGTGGCTGTTCCTGAGGTGA

Upstream 100 bases:

>100_bases
GACGGTGATCTCGTACTGGGAACCTGGCAATCCGTGCTGTTCGTGGAGTTAGACGGCCCACGATCTCGTCGTCTGCTCGT
GACCGTGGTGGGGGAGTGAA

Downstream 100 bases:

>100_bases
CGGGGGCGTCGGTAATGAGGGCAGTACCACGGTGCGTACCGTGCGTGCTTGAAATCGCGGTAAACACCGTCGAACGAGCT
GTTCCGGAGGATCGTCAGAA

Product: membrane-associated Zn-dependent protease

Products: NA

Alternate protein names: Membrane-Associated Zn-Dependent Protease; Zinc Metalloprotease; Peptidase; Membrane-Associated Metallopeptidase

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVEGVFRTDADPSMFPSYKDVKS
VERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKLAEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPV
FAYLGGWLAFGSTWAAVEFALAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG
VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVITWLSALPVYPLEGGYILRYY
YDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKLPSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLE
HSKVPHNLQWLFLR

Sequences:

>Translated_414_residues
MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVEGVFRTDADPSMFPSYKDVKS
VERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKLAEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPV
FAYLGGWLAFGSTWAAVEFALAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG
VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVITWLSALPVYPLEGGYILRYY
YDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKLPSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLE
HSKVPHNLQWLFLR
>Mature_414_residues
MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVEGVFRTDADPSMFPSYKDVKS
VERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKLAEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPV
FAYLGGWLAFGSTWAAVEFALAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG
VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVITWLSALPVYPLEGGYILRYY
YDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKLPSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLE
HSKVPHNLQWLFLR

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46680; Mature: 46680

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVE
CCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHCCCCCCCCCCEEEE
GVFRTDADPSMFPSYKDVKSVERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKL
EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHH
AEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPVFAYLGGWLAFGSTWAAVEFA
HHCCCCCCCCCCCCCEEHEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
LAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEECCHHHHHHHHHHH
TWLSALPVYPLEGGYILRYYYDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKL
HHHHHCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLEHSKVPHNLQWLFLR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVE
CCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHCCCCCCCCCCEEEE
GVFRTDADPSMFPSYKDVKSVERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKL
EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHH
AEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPVFAYLGGWLAFGSTWAAVEFA
HHCCCCCCCCCCCCCEEHEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
LAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEECCHHHHHHHHHHH
TWLSALPVYPLEGGYILRYYYDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKL
HHHHHCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLEHSKVPHNLQWLFLR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA