| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094249
Identifier: 20094249
GI number: 20094249
Start: 773691
End: 774935
Strand: Reverse
Name: 20094249
Synonym: MK0813
Alternate gene names: NA
Gene position: 774935-773691 (Counterclockwise)
Preceding gene: 20094250
Following gene: 20094248
Centisome position: 45.72
GC content: 59.04
Gene sequence:
>1245_bases ATGAGACGACAGTTACCCCTGGAACCCGTGGCAGCCGAGAAGGTAGAGGAGGAGTATGAGCTGGTAACCTTGCTCGTGTG TGACAATTGCGATTACTTCGAATTCAAACCCCACGACCGTGAGGTAGTATACGAGCGGAAGGGTAAGTGCCCTAAATGTG GTGGGACGTTACTAGTCGAGGGCGTGTTCCGTACGGATGCCGACCCGTCGATGTTTCCATCGTATAAAGACGTTAAGAGT GTTGAAAGGGCCCTCGAAAGTGCGGGATACGAGGTGAAGGAGTTCCGTGTCCGGGAGGACGGTTCGGTCGTTTTCCACTA CGAGCGGAAGGGAGACGCGCATCGCCTGGCTAGGAAGCTTGCTGAGATGAAATTCACAGCGGAACCGGAGGGGAAGGCCG GTAGGCTGGTCGTACAGCGTTTCGAAGTTCCCGAACAGGAGCCGGGCTGGTTGGCTCTGCTGGGGCTTTCGGTTCCGGTA TTCGCGTACTTGGGCGGATGGTTGGCGTTCGGCTCGACCTGGGCCGCGGTGGAGTTCGCACTCGCGTTCTCGGCGATTTA CTTCGGCAAGGAGATCGCGAAGCTCTGGGTAGCGAAGGTGGAAGGCCTCAGACCGCGCCTGCCGTTTTTCCTCGCGGTCC CTCCCTTCCCAGGGGCATTCTCCTCGGTGATTCGCTCGGAAGTTCGACCTATGCTGGTTGAATCGTTGTGCCGGGTGGGC GTAGCCGGTCTGGTGGCCGGGTTTCTACTATCCACCGCGATGTTCCTCCTAGGTTCCGCGTTCGACCATACGCCCGTCCG AATGCTCGTGTGGCACAACCCGTGGACGTTGCTCCTATCGCGCGAACTCGGAATCGTCGCGAACCCGATCACGTTGGCTG GATGGGCGGGACTCGTCATCACCTGGCTCTCGGCCCTGCCGGTGTACCCGCTCGAAGGAGGATACATCCTGCGATATTAC TACGATACCCGCACCGTCAAGTGGTTCTCTGTGGCGTCGGCGTTCATCCAAGGCTGGCTGCACTGGTACCACATAGCGGT GGCGACCGTGATCGTGCTGGTTAAGATAACGGCGAAACTACCGTCCGACCGCTCGTTCTTGGACGATGACGAGAGCAAGA GCTGGCTACCCGCCTTGCTGCTGGTGGCCCTGTTCGTCCTGCTGATATCACCGGCACCGTTCGGGCTGTGGCCCTTAGAA CACTCGAAGGTACCACACAACCTGCAGTGGCTGTTCCTGAGGTGA
Upstream 100 bases:
>100_bases GACGGTGATCTCGTACTGGGAACCTGGCAATCCGTGCTGTTCGTGGAGTTAGACGGCCCACGATCTCGTCGTCTGCTCGT GACCGTGGTGGGGGAGTGAA
Downstream 100 bases:
>100_bases CGGGGGCGTCGGTAATGAGGGCAGTACCACGGTGCGTACCGTGCGTGCTTGAAATCGCGGTAAACACCGTCGAACGAGCT GTTCCGGAGGATCGTCAGAA
Product: membrane-associated Zn-dependent protease
Products: NA
Alternate protein names: Membrane-Associated Zn-Dependent Protease; Zinc Metalloprotease; Peptidase; Membrane-Associated Metallopeptidase
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVEGVFRTDADPSMFPSYKDVKS VERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKLAEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPV FAYLGGWLAFGSTWAAVEFALAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVITWLSALPVYPLEGGYILRYY YDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKLPSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLE HSKVPHNLQWLFLR
Sequences:
>Translated_414_residues MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVEGVFRTDADPSMFPSYKDVKS VERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKLAEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPV FAYLGGWLAFGSTWAAVEFALAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVITWLSALPVYPLEGGYILRYY YDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKLPSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLE HSKVPHNLQWLFLR >Mature_414_residues MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVEGVFRTDADPSMFPSYKDVKS VERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKLAEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPV FAYLGGWLAFGSTWAAVEFALAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVITWLSALPVYPLEGGYILRYY YDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKLPSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLE HSKVPHNLQWLFLR
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46680; Mature: 46680
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVE CCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHCCCCCCCCCCEEEE GVFRTDADPSMFPSYKDVKSVERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKL EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHH AEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPVFAYLGGWLAFGSTWAAVEFA HHCCCCCCCCCCCCCEEHEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH LAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVI HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEECCHHHHHHHHHHH TWLSALPVYPLEGGYILRYYYDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKL HHHHHCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLEHSKVPHNLQWLFLR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRRQLPLEPVAAEKVEEEYELVTLLVCDNCDYFEFKPHDREVVYERKGKCPKCGGTLLVE CCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHCCCCCCCCCCEEEE GVFRTDADPSMFPSYKDVKSVERALESAGYEVKEFRVREDGSVVFHYERKGDAHRLARKL EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHH AEMKFTAEPEGKAGRLVVQRFEVPEQEPGWLALLGLSVPVFAYLGGWLAFGSTWAAVEFA HHCCCCCCCCCCCCCEEHEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH LAFSAIYFGKEIAKLWVAKVEGLRPRLPFFLAVPPFPGAFSSVIRSEVRPMLVESLCRVG HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VAGLVAGFLLSTAMFLLGSAFDHTPVRMLVWHNPWTLLLSRELGIVANPITLAGWAGLVI HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEECCHHHHHHHHHHH TWLSALPVYPLEGGYILRYYYDTRTVKWFSVASAFIQGWLHWYHIAVATVIVLVKITAKL HHHHHCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSDRSFLDDDESKSWLPALLLVALFVLLISPAPFGLWPLEHSKVPHNLQWLFLR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA