| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is gltX
Identifier: 20094194
GI number: 20094194
Start: 718688
End: 720403
Strand: Reverse
Name: gltX
Synonym: MK0757
Alternate gene names: 20094194
Gene position: 720403-718688 (Counterclockwise)
Preceding gene: 20094195
Following gene: 20094193
Centisome position: 42.5
GC content: 58.45
Gene sequence:
>1716_bases GTGGAGGAGAAGGAACTTCGAGATCTCGTCCGCAGGTACGCTCTGGAGAACGCGGCCCGATACGGTGGGAGGGCGAATCC CAACGCGGTGATGAAGAAGATCATGAAGGAACACGAAGAGCTACGTCCTAGGGCGAAAGAAGTCCTGAAGACCGTCAGAG AGGTGGTCCGCGAAGTTAACAAGATGTCCGGAGAGGAAATCAGACGCGAGCTGGAAGAACTCGGAGGACCGCGCGAAGAC GTAGCCCGGGACAAAGAAGGGCTCAAACCCCTTCCCGGAGCTGAACCGGGGAACGTTCGCCTTCGGTTCGCACCGAACCC TTCGGGTCCCCTCCACATAGGTCACGCCCGTGCCGCAGTACTTAACGACGAATACGCTAGAAGGTACGACGGCACCTTAG TCCTCCGCATTGAAGACACCGACCCGCGTCGCGTGGACCCTGAGGCCTACGACATGATCGAAGAGGATCTGGAGTGGCTC GGAGTCAACATCGACGAACGGTACGTGCAGTCTAACAGGATAGAACTGTATTACATGGTTTGCGAGGAGCTGCTGGAGCG GGAAGGGGCGTACGTTTGTACCTGTGATCCAGACGAGTTCCGGAGACTCCGCGACGTGGGGCGAGCCTGCCCGTGCCGCT CTCGGGATAAGGAGGAGAACCTCGAGCTCTGGGAGGAGATGTTGGACGGTACTTTCTCAGAAGGAGAAGCCGTCGTACGT GTCAAGACCGAAGTTGATCACCCGGATCCCGCGGTGAGGGAGTGGATAGCGTTCAGGATCGTCGAAGAAGAGCACCCGAT GACGGGTTCTCGGTACCTTGTGTGGCCGACGATGAACTTCGCCGTCGCTGTGGACGACCATCTCATGAACATCACGCACG TACTTCGTGGGAAGGATCATGAGTCCAACACACGGCGTCAGAAGTACGTGTTCGAGCATCTGGGGTGGGACACTCCGGAA TACGTTCACTACGGGATTCTGAAGGTTGAAGGTGCCGTGCTAAGCACTTCCGAGATCCGCCGTGGAATCGATTCAGGAGA GTACACAGGGTGGGACGACGTCCGAGTGGCTACCTTACGCGCCCTCCGACGCCGGGGTATTAAGCCGGAAGCAATACGTG AGACTATCCTCGAGATCGGCCTGACCGACGTGGACGCGACGTTCAGCTGGGAGCATCTTTACGCTCGGAACCGTAAGATG ATCGACCCTGAGTCTCACCGGTACTTCTTCGTCCGTGATCCTGTCGAATTACGGATCGAAGGGATGAAGGAGTCGGTCCT GGCCCGACTGCCTCTACACCCCGATCGGGATGAGGGAGAGAGGGTCTTAATTCTACATCCTGAGAACGGCGTGGCCCGAG CACTGTTGGACGGTGAAGACGCAGAAGACCTGTGGGAGGGCGACGTAGTTCGGCTGATGAACGCCGTCAACGTCGAGATC GAGGAAGTCGGAGACGGATGGTTGCGAGGCAGGTATCACAGCGACGACTACCGAATCGCGAAAGAGGAAGGTGCTCAAAT CGTCCACTGGGTACCGCCCGACCAGGCAGTACGGTGCGAGGTCGTCCGCCCGGACGGTAGCGTTGAGAGTGGATACGCCG AAATTAACGTCGAGCGCGAACAGGCCGGCAGCACCGTCCAGTTCGAACGGCTGTACTTCGTGCGACTCGAAGAGGTCTCC AGCGGTGGGGTAAGGGCTGTGTACGCGCATGACTAG
Upstream 100 bases:
>100_bases CGTCTGGGTCCCCCGGGGGAGAAGGCCGTCGCCTGTCGATGATCCCGGGGCCGGAGGACGGGGGACACCCCCTCACTGAT TATCTCGGGGAGAATGGACC
Downstream 100 bases:
>100_bases CCCTCCCTCCAGCATAGCACTTTCCGGCGGTAAGGACAGTGTAGCCACGCTGATAGACGCCGCCGATAGGTGGAATGTTA AGGTAGCCGTAACAGTAGTC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MEEKELRDLVRRYALENAARYGGRANPNAVMKKIMKEHEELRPRAKEVLKTVREVVREVNKMSGEEIRRELEELGGPRED VARDKEGLKPLPGAEPGNVRLRFAPNPSGPLHIGHARAAVLNDEYARRYDGTLVLRIEDTDPRRVDPEAYDMIEEDLEWL GVNIDERYVQSNRIELYYMVCEELLEREGAYVCTCDPDEFRRLRDVGRACPCRSRDKEENLELWEEMLDGTFSEGEAVVR VKTEVDHPDPAVREWIAFRIVEEEHPMTGSRYLVWPTMNFAVAVDDHLMNITHVLRGKDHESNTRRQKYVFEHLGWDTPE YVHYGILKVEGAVLSTSEIRRGIDSGEYTGWDDVRVATLRALRRRGIKPEAIRETILEIGLTDVDATFSWEHLYARNRKM IDPESHRYFFVRDPVELRIEGMKESVLARLPLHPDRDEGERVLILHPENGVARALLDGEDAEDLWEGDVVRLMNAVNVEI EEVGDGWLRGRYHSDDYRIAKEEGAQIVHWVPPDQAVRCEVVRPDGSVESGYAEINVEREQAGSTVQFERLYFVRLEEVS SGGVRAVYAHD
Sequences:
>Translated_571_residues MEEKELRDLVRRYALENAARYGGRANPNAVMKKIMKEHEELRPRAKEVLKTVREVVREVNKMSGEEIRRELEELGGPRED VARDKEGLKPLPGAEPGNVRLRFAPNPSGPLHIGHARAAVLNDEYARRYDGTLVLRIEDTDPRRVDPEAYDMIEEDLEWL GVNIDERYVQSNRIELYYMVCEELLEREGAYVCTCDPDEFRRLRDVGRACPCRSRDKEENLELWEEMLDGTFSEGEAVVR VKTEVDHPDPAVREWIAFRIVEEEHPMTGSRYLVWPTMNFAVAVDDHLMNITHVLRGKDHESNTRRQKYVFEHLGWDTPE YVHYGILKVEGAVLSTSEIRRGIDSGEYTGWDDVRVATLRALRRRGIKPEAIRETILEIGLTDVDATFSWEHLYARNRKM IDPESHRYFFVRDPVELRIEGMKESVLARLPLHPDRDEGERVLILHPENGVARALLDGEDAEDLWEGDVVRLMNAVNVEI EEVGDGWLRGRYHSDDYRIAKEEGAQIVHWVPPDQAVRCEVVRPDGSVESGYAEINVEREQAGSTVQFERLYFVRLEEVS SGGVRAVYAHD >Mature_571_residues MEEKELRDLVRRYALENAARYGGRANPNAVMKKIMKEHEELRPRAKEVLKTVREVVREVNKMSGEEIRRELEELGGPRED VARDKEGLKPLPGAEPGNVRLRFAPNPSGPLHIGHARAAVLNDEYARRYDGTLVLRIEDTDPRRVDPEAYDMIEEDLEWL GVNIDERYVQSNRIELYYMVCEELLEREGAYVCTCDPDEFRRLRDVGRACPCRSRDKEENLELWEEMLDGTFSEGEAVVR VKTEVDHPDPAVREWIAFRIVEEEHPMTGSRYLVWPTMNFAVAVDDHLMNITHVLRGKDHESNTRRQKYVFEHLGWDTPE YVHYGILKVEGAVLSTSEIRRGIDSGEYTGWDDVRVATLRALRRRGIKPEAIRETILEIGLTDVDATFSWEHLYARNRKM IDPESHRYFFVRDPVELRIEGMKESVLARLPLHPDRDEGERVLILHPENGVARALLDGEDAEDLWEGDVVRLMNAVNVEI EEVGDGWLRGRYHSDDYRIAKEEGAQIVHWVPPDQAVRCEVVRPDGSVESGYAEINVEREQAGSTVQFERLYFVRLEEVS SGGVRAVYAHD
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI62241042, Length=412, Percent_Identity=30.0970873786408, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI4826960, Length=438, Percent_Identity=29.9086757990868, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI134288884, Length=243, Percent_Identity=33.7448559670782, Blast_Score=132, Evalue=9e-31, Organism=Escherichia coli, GI1786895, Length=521, Percent_Identity=29.9424184261036, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1788743, Length=234, Percent_Identity=35.4700854700855, Blast_Score=118, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17511007, Length=397, Percent_Identity=31.9899244332494, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17543332, Length=344, Percent_Identity=32.8488372093023, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI71993394, Length=264, Percent_Identity=29.5454545454545, Blast_Score=110, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6324742, Length=359, Percent_Identity=33.4261838440111, Blast_Score=215, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321192, Length=504, Percent_Identity=27.9761904761905, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6324540, Length=307, Percent_Identity=30.9446254071661, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24649466, Length=411, Percent_Identity=34.0632603406326, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI17864488, Length=363, Percent_Identity=31.129476584022, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24665321, Length=304, Percent_Identity=34.2105263157895, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: 520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1200 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_METKA (Q8TXB7)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614041.1 - ProteinModelPortal: Q8TXB7 - SMR: Q8TXB7 - GeneID: 1476858 - GenomeReviews: AE009439_GR - KEGG: mka:MK0757 - NMPDR: fig|190192.1.peg.754 - HOGENOM: HBG334108 - OMA: MRFAPNP - ProtClustDB: PRK04156 - BioCyc: MKAN190192:MK0757-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_A - InterPro: IPR001412 - InterPro: IPR004526 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR020059 - InterPro: IPR022888 - InterPro: IPR011035 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00463
Pfam domain/function: PF00749 tRNA-synt_1c; PF03950 tRNA-synt_1c_C; SSF50715 Ribosomal_L25rel
EC number: =6.1.1.17
Molecular weight: Translated: 65976; Mature: 65976
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKELRDLVRRYALENAARYGGRANPNAVMKKIMKEHEELRPRAKEVLKTVREVVREVN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH KMSGEEIRRELEELGGPREDVARDKEGLKPLPGAEPGNVRLRFAPNPSGPLHIGHARAAV HCCHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCCCEEEEECCCCCCCEEECCHHHHH LNDEYARRYDGTLVLRIEDTDPRRVDPEAYDMIEEDLEWLGVNIDERYVQSNRIELYYMV HCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEHHH CEELLEREGAYVCTCDPDEFRRLRDVGRACPCRSRDKEENLELWEEMLDGTFSEGEAVVR HHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE VKTEVDHPDPAVREWIAFRIVEEEHPMTGSRYLVWPTMNFAVAVDDHLMNITHVLRGKDH EEECCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCCCC ESNTRRQKYVFEHLGWDTPEYVHYGILKVEGAVLSTSEIRRGIDSGEYTGWDDVRVATLR CCHHHHHHHHHHHHCCCCHHHHEEEEEEECCCEECHHHHHCCCCCCCCCCCCHHHHHHHH ALRRRGIKPEAIRETILEIGLTDVDATFSWEHLYARNRKMIDPESHRYFFVRDPVELRIE HHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHEEC GMKESVLARLPLHPDRDEGERVLILHPENGVARALLDGEDAEDLWEGDVVRLMNAVNVEI CHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCC EEVGDGWLRGRYHSDDYRIAKEEGAQIVHWVPPDQAVRCEVVRPDGSVESGYAEINVERE EECCCCHHCCCEECCCCEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEHH QAGSTVQFERLYFVRLEEVSSGGVRAVYAHD HCCCEEEEEEEEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MEEKELRDLVRRYALENAARYGGRANPNAVMKKIMKEHEELRPRAKEVLKTVREVVREVN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH KMSGEEIRRELEELGGPREDVARDKEGLKPLPGAEPGNVRLRFAPNPSGPLHIGHARAAV HCCHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCCCEEEEECCCCCCCEEECCHHHHH LNDEYARRYDGTLVLRIEDTDPRRVDPEAYDMIEEDLEWLGVNIDERYVQSNRIELYYMV HCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEHHH CEELLEREGAYVCTCDPDEFRRLRDVGRACPCRSRDKEENLELWEEMLDGTFSEGEAVVR HHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE VKTEVDHPDPAVREWIAFRIVEEEHPMTGSRYLVWPTMNFAVAVDDHLMNITHVLRGKDH EEECCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCCCC ESNTRRQKYVFEHLGWDTPEYVHYGILKVEGAVLSTSEIRRGIDSGEYTGWDDVRVATLR CCHHHHHHHHHHHHCCCCHHHHEEEEEEECCCEECHHHHHCCCCCCCCCCCCHHHHHHHH ALRRRGIKPEAIRETILEIGLTDVDATFSWEHLYARNRKMIDPESHRYFFVRDPVELRIE HHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHEEC GMKESVLARLPLHPDRDEGERVLILHPENGVARALLDGEDAEDLWEGDVVRLMNAVNVEI CHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCC EEVGDGWLRGRYHSDDYRIAKEEGAQIVHWVPPDQAVRCEVVRPDGSVESGYAEINVERE EECCCCHHCCCEECCCCEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEHH QAGSTVQFERLYFVRLEEVSSGGVRAVYAHD HCCCEEEEEEEEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014