| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094135
Identifier: 20094135
GI number: 20094135
Start: 661961
End: 663658
Strand: Reverse
Name: 20094135
Synonym: MK0698
Alternate gene names: NA
Gene position: 663658-661961 (Counterclockwise)
Preceding gene: 20094136
Following gene: 20094133
Centisome position: 39.15
GC content: 61.6
Gene sequence:
>1698_bases ATGATCCCCCGAGGGGAGAGGGGGTTCCTGTTCACTCCGGCGGTGGCACTAGCGTTGGCCTTGTTGCTGCTGTCCGTTTC GTACCTGTCGTACCGGGGTAGGGAGTCCGGGTACCTGATCCGATGCGAGTACATCAAGCCCGTCATCAACGAGGCCATAC TCTCCATGACGCATCAGCAGCTGAGCCGGGCCGTGTACCTGGGCGTCGTGGACTTCCTGAACGGGACCGAACTGCCGGGC GGCGAGAAGAACGGTTACCGATACGGCCGTATCGCCGTCCACGCGGGAGGTACTAACATCGAGTGGGTGGCGTCGCCCAC CGGGCTGCTTGCACCTTACGACATCGTCGACGTCGGGCGGCTGAAAGGGGACTACGACTCGTACCGCACCGTGATAGAGT CGCTGCGCTACTACATCGACTACGAGCTCGCGAAGCTCGCGGTGGACGTTCATGACTCGATCAAGCAGACCCAAGGGGCA GAGGTGTGGATAGTACCCAGGTGCTACGTTGGTGATGGGAGTTTGTATTGGGACACGAGCGATCCCGAACATCCGAAAGT AAGGCTCTCTTGGTATGGGCGCTCTGATCCCAAGGACGTCAGCAGGACACCCATCGTGCCCGACGCCCACGACCCGTTCA CGATTTACGTGCACCTCGACATCTACCTCATCGCGCAGGTACCGGGATGGGAGCAATTCAACCTCCACCTCGGACAGACG ACCGTCCAGGCCTCGATTCAGGGATACGCTCCTTCGGGGAACGAAAACAAGGCCGTGTTCGATCCGCTCCCGATCTGGGC GTACTACGTCTCGAAGGACCGGTGGGGCGACGGCCCGCTGAGGTTCAAGCCGATGATCGTGATGGGCAACTATCAGGTGG CCGTGGGGCAGGGCGGATCCATCGGAGGGGAACGGGTAGGGCAGTCCGACGTGATAAGGTTCTACTCGGCGTACCTGAAC GAGGTGAACGGTGACGGGAGGAACAGTGAGGCCGACGAGGACAAGCTCAGGCTGGCCCACGTACTCTCTATACCGGGCAA GATGCTCCCCTGGGACGACACGAAACTCCTGAACGAGAACGAGGTGGACGGTGAGACGGAGAGCCAGTGGGTGATACTTC CTTACTTCCCGACCAGGGAGAACGTGCTCGGTGACGACGTGGGTCGGCCCCCGAACTTCATCGAGAGGGCCGCGGGGATA CTGTACGTGCTCCCGAGTAACCGGGTGGTCTCGGTCGACGGCATCGAGGACCCGGATGTGGATGTTATCCAAAGGTGCGA GGCCGGTATGGAGACGCTGATCCCCGCGCTGCCGGCGGAGGAGGTGGACGTGTGGGCACACGGTCCCTTCGGGACCGTCG ACTGGATGGCGTGGATGGAGGTGTTGGCGTCGAGGAGCGGTAAGCTCAGAGGAGTGATAAACGGAGTTCGAGCCAGTGAG TTCGGACCGCCTGAGCGTTACGACGATCGGGGGGAGCCGGTGCGACTCTTCAGACTGTACGGCTTCAACTCGAACGATCC CGTGGTTCGACAAATCAACAGCTTGTTGGCGGGGATCGGGCTCCAGCTGGCCACGGACGCGGACCGGAGGAAGGGGTTCG CGCTCCCGGGTGCCGACATACTGAAGTGGTTCCTGCTGCCGGGTACCAACACGGACATGGTGCTGAAGAACGGCAGAGTC ATCCGGGTGTGGCCCTAA
Upstream 100 bases:
>100_bases CGTTCACCGTCACCCTGAGCGGGTCGGAGAACGAGATCTTCTGGAACCAGTGGACGGCCGGGCTGTTCCCCGTGAAACTC CGGGTAGGGGTGACCGCCGG
Downstream 100 bases:
>100_bases CACACACCTTCACCTTTGTTAGCTGACCTCGAAGACGCGAGGTTTCCCACGAGCAAGCCACGACGCGGCGGTGATCTCCT TACCGAGCTCGGATTCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MIPRGERGFLFTPAVALALALLLLSVSYLSYRGRESGYLIRCEYIKPVINEAILSMTHQQLSRAVYLGVVDFLNGTELPG GEKNGYRYGRIAVHAGGTNIEWVASPTGLLAPYDIVDVGRLKGDYDSYRTVIESLRYYIDYELAKLAVDVHDSIKQTQGA EVWIVPRCYVGDGSLYWDTSDPEHPKVRLSWYGRSDPKDVSRTPIVPDAHDPFTIYVHLDIYLIAQVPGWEQFNLHLGQT TVQASIQGYAPSGNENKAVFDPLPIWAYYVSKDRWGDGPLRFKPMIVMGNYQVAVGQGGSIGGERVGQSDVIRFYSAYLN EVNGDGRNSEADEDKLRLAHVLSIPGKMLPWDDTKLLNENEVDGETESQWVILPYFPTRENVLGDDVGRPPNFIERAAGI LYVLPSNRVVSVDGIEDPDVDVIQRCEAGMETLIPALPAEEVDVWAHGPFGTVDWMAWMEVLASRSGKLRGVINGVRASE FGPPERYDDRGEPVRLFRLYGFNSNDPVVRQINSLLAGIGLQLATDADRRKGFALPGADILKWFLLPGTNTDMVLKNGRV IRVWP
Sequences:
>Translated_565_residues MIPRGERGFLFTPAVALALALLLLSVSYLSYRGRESGYLIRCEYIKPVINEAILSMTHQQLSRAVYLGVVDFLNGTELPG GEKNGYRYGRIAVHAGGTNIEWVASPTGLLAPYDIVDVGRLKGDYDSYRTVIESLRYYIDYELAKLAVDVHDSIKQTQGA EVWIVPRCYVGDGSLYWDTSDPEHPKVRLSWYGRSDPKDVSRTPIVPDAHDPFTIYVHLDIYLIAQVPGWEQFNLHLGQT TVQASIQGYAPSGNENKAVFDPLPIWAYYVSKDRWGDGPLRFKPMIVMGNYQVAVGQGGSIGGERVGQSDVIRFYSAYLN EVNGDGRNSEADEDKLRLAHVLSIPGKMLPWDDTKLLNENEVDGETESQWVILPYFPTRENVLGDDVGRPPNFIERAAGI LYVLPSNRVVSVDGIEDPDVDVIQRCEAGMETLIPALPAEEVDVWAHGPFGTVDWMAWMEVLASRSGKLRGVINGVRASE FGPPERYDDRGEPVRLFRLYGFNSNDPVVRQINSLLAGIGLQLATDADRRKGFALPGADILKWFLLPGTNTDMVLKNGRV IRVWP >Mature_565_residues MIPRGERGFLFTPAVALALALLLLSVSYLSYRGRESGYLIRCEYIKPVINEAILSMTHQQLSRAVYLGVVDFLNGTELPG GEKNGYRYGRIAVHAGGTNIEWVASPTGLLAPYDIVDVGRLKGDYDSYRTVIESLRYYIDYELAKLAVDVHDSIKQTQGA EVWIVPRCYVGDGSLYWDTSDPEHPKVRLSWYGRSDPKDVSRTPIVPDAHDPFTIYVHLDIYLIAQVPGWEQFNLHLGQT TVQASIQGYAPSGNENKAVFDPLPIWAYYVSKDRWGDGPLRFKPMIVMGNYQVAVGQGGSIGGERVGQSDVIRFYSAYLN EVNGDGRNSEADEDKLRLAHVLSIPGKMLPWDDTKLLNENEVDGETESQWVILPYFPTRENVLGDDVGRPPNFIERAAGI LYVLPSNRVVSVDGIEDPDVDVIQRCEAGMETLIPALPAEEVDVWAHGPFGTVDWMAWMEVLASRSGKLRGVINGVRASE FGPPERYDDRGEPVRLFRLYGFNSNDPVVRQINSLLAGIGLQLATDADRRKGFALPGADILKWFLLPGTNTDMVLKNGRV IRVWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62980; Mature: 62980
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPRGERGFLFTPAVALALALLLLSVSYLSYRGRESGYLIRCEYIKPVINEAILSMTHQQ CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LSRAVYLGVVDFLNGTELPGGEKNGYRYGRIAVHAGGTNIEWVASPTGLLAPYDIVDVGR HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEHHH LKGDYDSYRTVIESLRYYIDYELAKLAVDVHDSIKQTQGAEVWIVPRCYVGDGSLYWDTS CCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCEEEEEEEEEECCCEEEECCC DPEHPKVRLSWYGRSDPKDVSRTPIVPDAHDPFTIYVHLDIYLIAQVPGWEQFNLHLGQT CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEECCE TVQASIQGYAPSGNENKAVFDPLPIWAYYVSKDRWGDGPLRFKPMIVMGNYQVAVGQGGS EEEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCEEEEECCCCC IGGERVGQSDVIRFYSAYLNEVNGDGRNSEADEDKLRLAHVLSIPGKMLPWDDTKLLNEN CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC EVDGETESQWVILPYFPTRENVLGDDVGRPPNFIERAAGILYVLPSNRVVSVDGIEDPDV CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCEEEECCCCCCCH DVIQRCEAGMETLIPALPAEEVDVWAHGPFGTVDWMAWMEVLASRSGKLRGVINGVRASE HHHHHHHHCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHCCCCCCC FGPPERYDDRGEPVRLFRLYGFNSNDPVVRQINSLLAGIGLQLATDADRRKGFALPGADI CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCHHH LKWFLLPGTNTDMVLKNGRVIRVWP HHEEECCCCCCCEEEECCEEEEECC >Mature Secondary Structure MIPRGERGFLFTPAVALALALLLLSVSYLSYRGRESGYLIRCEYIKPVINEAILSMTHQQ CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LSRAVYLGVVDFLNGTELPGGEKNGYRYGRIAVHAGGTNIEWVASPTGLLAPYDIVDVGR HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEHHH LKGDYDSYRTVIESLRYYIDYELAKLAVDVHDSIKQTQGAEVWIVPRCYVGDGSLYWDTS CCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCEEEEEEEEEECCCEEEECCC DPEHPKVRLSWYGRSDPKDVSRTPIVPDAHDPFTIYVHLDIYLIAQVPGWEQFNLHLGQT CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEECCE TVQASIQGYAPSGNENKAVFDPLPIWAYYVSKDRWGDGPLRFKPMIVMGNYQVAVGQGGS EEEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCEEEEECCCCC IGGERVGQSDVIRFYSAYLNEVNGDGRNSEADEDKLRLAHVLSIPGKMLPWDDTKLLNEN CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC EVDGETESQWVILPYFPTRENVLGDDVGRPPNFIERAAGILYVLPSNRVVSVDGIEDPDV CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCEEEECCCCCCCH DVIQRCEAGMETLIPALPAEEVDVWAHGPFGTVDWMAWMEVLASRSGKLRGVINGVRASE HHHHHHHHCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHCCCCCCC FGPPERYDDRGEPVRLFRLYGFNSNDPVVRQINSLLAGIGLQLATDADRRKGFALPGADI CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCHHH LKWFLLPGTNTDMVLKNGRVIRVWP HHEEECCCCCCCEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA