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The map label for this gene is nusA

Identifier: 20094120

GI number: 20094120

Start: 641007

End: 641435

Strand: Reverse

Name: nusA

Synonym: MK0682

Alternate gene names: NA

Gene position: 641435-641007 (Counterclockwise)

Preceding gene: 20094121

Following gene: 20094119

Centisome position: 37.84

GC content: 59.44

Gene sequence:

>429_bases
TTGGCGGTTAAACTGGAAACCGAGCAGATCCGCATGATCGCGCTCTTCGAGAGCCTCACCGGGGCACACGTGCTGGACTG
CGTGATCGACGACGAGCACAACAGGGCGATCTTCGTGGTGAAGGAGGGACAGATAGGCCTAGCGATCGGTAAGAAGGGTC
AGAACGTGCGTCGCGTTCAGGAGCAGCTCGGGATGGACGTGGAGGTCGTGGAGCACTCCGAGGATCCGGAGAAGTTCATC
CGAAACGCCCTGTTTCCGGCGCGCGTGAAGAGCGTTCGAGTGACGGAGCGCGGGAACAAGAAAGTCGCGATAGTGGACGT
GCCGGAGTCCGAGCGGGGCCGGGTTATCGGTAAAGGGGGAAGGAACATAAAGAAGGCGCGGATCCTCGCGAGGAGACACC
ATGGTATCGATGATATCATCGTCACGTGA

Upstream 100 bases:

>100_bases
TTCGATGGCGGTCCTGGACGACGGCGAGTCTGACCTCATCGCTACGGTCCGCAAGGCTATGGAGGAAGGGGCCGCACCGA
GCTAAAAGGGGTGAAAAACC

Downstream 100 bases:

>100_bases
TCTAGGGGGCTCACGCTCATGCCGGGCAAGAAGAGTCCCGCTGGGGAGTTCGCGGCCCGTAAGCTGCGGGAGAAGCGTAA
GAAGTTCCGGTGGAAGGACG

Product: transcription elongation factor NusA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAVKLETEQIRMIALFESLTGAHVLDCVIDDEHNRAIFVVKEGQIGLAIGKKGQNVRRVQEQLGMDVEVVEHSEDPEKFI
RNALFPARVKSVRVTERGNKKVAIVDVPESERGRVIGKGGRNIKKARILARRHHGIDDIIVT

Sequences:

>Translated_142_residues
MAVKLETEQIRMIALFESLTGAHVLDCVIDDEHNRAIFVVKEGQIGLAIGKKGQNVRRVQEQLGMDVEVVEHSEDPEKFI
RNALFPARVKSVRVTERGNKKVAIVDVPESERGRVIGKGGRNIKKARILARRHHGIDDIIVT
>Mature_141_residues
AVKLETEQIRMIALFESLTGAHVLDCVIDDEHNRAIFVVKEGQIGLAIGKKGQNVRRVQEQLGMDVEVVEHSEDPEKFIR
NALFPARVKSVRVTERGNKKVAIVDVPESERGRVIGKGGRNIKKARILARRHHGIDDIIVT

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR004044
- InterPro:   IPR010212 [H]

Pfam domain/function: PF07650 KH_2 [H]

EC number: NA

Molecular weight: Translated: 15910; Mature: 15779

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKLETEQIRMIALFESLTGAHVLDCVIDDEHNRAIFVVKEGQIGLAIGKKGQNVRRVQ
CEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHH
EQLGMDVEVVEHSEDPEKFIRNALFPARVKSVRVTERGNKKVAIVDVPESERGRVIGKGG
HHHCCEEEEEECCCCHHHHHHHCCCCHHHEEEEEEECCCCEEEEEECCCCCCCEEEECCC
RNIKKARILARRHHGIDDIIVT
CCHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
AVKLETEQIRMIALFESLTGAHVLDCVIDDEHNRAIFVVKEGQIGLAIGKKGQNVRRVQ
EEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHH
EQLGMDVEVVEHSEDPEKFIRNALFPARVKSVRVTERGNKKVAIVDVPESERGRVIGKGG
HHHCCEEEEEECCCCHHHHHHHCCCCHHHEEEEEEECCCCEEEEEECCCCCCCEEEECCC
RNIKKARILARRHHGIDDIIVT
CCHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1840672 [H]