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The map label for this gene is 20094038

Identifier: 20094038

GI number: 20094038

Start: 558229

End: 558702

Strand: Reverse

Name: 20094038

Synonym: MK0600

Alternate gene names: NA

Gene position: 558702-558229 (Counterclockwise)

Preceding gene: 20094043

Following gene: 20094034

Centisome position: 32.96

GC content: 63.71

Gene sequence:

>474_bases
GTGATTCCCGTGACCGTTGTGTACCACAACGTGCACAGCCCCAGGAAGGTGGAGGAGATGGCCAGGACCGTGGCCGGTTT
CGGGGCGAAGCGGTTCGTCATCAGCAGAGCACTCGGTAGCGCGGCCCAGGAAGGGGTGCCCAAGGCGCAGAGGATCTGCC
TGGAGGCCGGAGTCGAGCTCCTGTTCTTTCAGGACCTGGAGGAGGCCCTGAAGGCGCTCTCCCCGGACGTGACGTACATG
GCCGAGGATGCCGAGCACGGTGGGGCGAAGCCGCTGGACTTCGACGCCGTGGTCGAAGAGATCGAGCAGGAGAGGGAGGT
CTGCTTCGTCTTCGGCAGCGCCAGACCGGGATTGACGAAACAGGAGCTCGAGCTCGGTGACGAGGCCGTGTACGTGGGTA
CGGAGCGTAACGTGGGTGAGGTAGGCGCCGTAGCGATCCTACTCCACGAGCTGAGAAAGCGTCTGAATCAGTGA

Upstream 100 bases:

>100_bases
CCGCCGAGGACCGCCACGATGACTATGCCCAGGGCTACCACCTTCTTCACGGGACCGCCCCCGACGACCCGTTTGAGTAT
TATTATTTGGGGGTTTCCAT

Downstream 100 bases:

>100_bases
ACGCGGACCACGAGCCGGTAAAGCGACTCCTCCGGGGAGTACGGCTTCACCTCCCGGTGAGACTCGAGTTCCACCGGTCT
ATCGGCCTTCCTACGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MIPVTVVYHNVHSPRKVEEMARTVAGFGAKRFVISRALGSAAQEGVPKAQRICLEAGVELLFFQDLEEALKALSPDVTYM
AEDAEHGGAKPLDFDAVVEEIEQEREVCFVFGSARPGLTKQELELGDEAVYVGTERNVGEVGAVAILLHELRKRLNQ

Sequences:

>Translated_157_residues
MIPVTVVYHNVHSPRKVEEMARTVAGFGAKRFVISRALGSAAQEGVPKAQRICLEAGVELLFFQDLEEALKALSPDVTYM
AEDAEHGGAKPLDFDAVVEEIEQEREVCFVFGSARPGLTKQELELGDEAVYVGTERNVGEVGAVAILLHELRKRLNQ
>Mature_157_residues
MIPVTVVYHNVHSPRKVEEMARTVAGFGAKRFVISRALGSAAQEGVPKAQRICLEAGVELLFFQDLEEALKALSPDVTYM
AEDAEHGGAKPLDFDAVVEEIEQEREVCFVFGSARPGLTKQELELGDEAVYVGTERNVGEVGAVAILLHELRKRLNQ

Specific function: Unknown

COG id: COG4080

COG function: function code L; RecB-family nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.pernix APE2001 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018665 [H]

Pfam domain/function: PF09895 DUF2122 [H]

EC number: NA

Molecular weight: Translated: 17221; Mature: 17221

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVTVVYHNVHSPRKVEEMARTVAGFGAKRFVISRALGSAAQEGVPKAQRICLEAGVEL
CCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
LFFQDLEEALKALSPDVTYMAEDAEHGGAKPLDFDAVVEEIEQEREVCFVFGSARPGLTK
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCH
QELELGDEAVYVGTERNVGEVGAVAILLHELRKRLNQ
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPVTVVYHNVHSPRKVEEMARTVAGFGAKRFVISRALGSAAQEGVPKAQRICLEAGVEL
CCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
LFFQDLEEALKALSPDVTYMAEDAEHGGAKPLDFDAVVEEIEQEREVCFVFGSARPGLTK
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCH
QELELGDEAVYVGTERNVGEVGAVAILLHELRKRLNQ
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]