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The map label for this gene is dac [H]

Identifier: 20093927

GI number: 20093927

Start: 450514

End: 451131

Strand: Reverse

Name: dac [H]

Synonym: MK0489

Alternate gene names: 20093927

Gene position: 451131-450514 (Counterclockwise)

Preceding gene: 20093928

Following gene: 20093923

Centisome position: 26.62

GC content: 56.96

Gene sequence:

>618_bases
TTGATCGTAATGACGGTATTTGCACACCCAGACGACATGGAAGTTCATTGTGGAGGGACCGTGCGTAAGCTTTCCTCCGC
GGGGCACAGAGTTATCGAAGTAATAATGAGCAAGGGAAACAACGGCGGCGACGAGGAGGTCCGGGAGCGTGAGGCCATCG
AGGGTGCCAAATGTCTCGGTGTCGATCGAGTCGAATTCTTGAACCATGAAGACGGCAGGATCTCCGTCGATCCCGAGAGT
ATCGATGCCGTCCGGGCACTGATCTCGAAGTTCGAGCCAGACGTTGTGTTCACACACTCCCCCAATGACACGCACCAAGA
CCATCGCCGCACGTTTCGAATAGTAACATCGGCCGTCAGCAAGTTCCCCGAAGTGACCGTGCTGATGGGGGAAGGACCCT
CCACGGTGGGGTTTCAACCCGTAGTTTACGTCGACGTCACCGACGTGCTGGAGAAGAAGCTGGAAGCTGTCAGGGTACAC
CGCTCCCAAGTCGAACGCGGGGCGATCAGTGAGGAAATGGTGATGAAGACCGCGGAGTTCCGTGGGATGGAGATAGGTGT
CAAGTACGCGGAAGCCTTCGAGGCCTTCCGGATCAGCGGTTCACTGCTCCTCGGCTAG

Upstream 100 bases:

>100_bases
TCTTCGTCGAATGGGCCGCCGTGTACGGCCTGATCTGGCTTGCGATCCGTGGTAACGTTTGGTACAGGACCACTCGCGCC
TCGGAGGGGGACGATCATGA

Downstream 100 bases:

>100_bases
ATCCCTTTCCCGGACCGGCCCTTCCGGCTCCTCTTCCTCGAACACCTGCGCTTCGAACACGTAGATTTCGCAGTCCGGAG
AACACCACCAGTCCGGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: N-acetylchitobiose deacetylase; Tk-Dac [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIVMTVFAHPDDMEVHCGGTVRKLSSAGHRVIEVIMSKGNNGGDEEVREREAIEGAKCLGVDRVEFLNHEDGRISVDPES
IDAVRALISKFEPDVVFTHSPNDTHQDHRRTFRIVTSAVSKFPEVTVLMGEGPSTVGFQPVVYVDVTDVLEKKLEAVRVH
RSQVERGAISEEMVMKTAEFRGMEIGVKYAEAFEAFRISGSLLLG

Sequences:

>Translated_205_residues
MIVMTVFAHPDDMEVHCGGTVRKLSSAGHRVIEVIMSKGNNGGDEEVREREAIEGAKCLGVDRVEFLNHEDGRISVDPES
IDAVRALISKFEPDVVFTHSPNDTHQDHRRTFRIVTSAVSKFPEVTVLMGEGPSTVGFQPVVYVDVTDVLEKKLEAVRVH
RSQVERGAISEEMVMKTAEFRGMEIGVKYAEAFEAFRISGSLLLG
>Mature_205_residues
MIVMTVFAHPDDMEVHCGGTVRKLSSAGHRVIEVIMSKGNNGGDEEVREREAIEGAKCLGVDRVEFLNHEDGRISVDPES
IDAVRALISKFEPDVVFTHSPNDTHQDHRRTFRIVTSAVSKFPEVTVLMGEGPSTVGFQPVVYVDVTDVLEKKLEAVRVH
RSQVERGAISEEMVMKTAEFRGMEIGVKYAEAFEAFRISGSLLLG

Specific function: Deacylates the non-reducing end of diacetylchitobiose (GlcNAc2). Can also use N-acetylglucosamine (GlcNAc) and N- acetylchitotriose (GlcNAc3). Probably involved in chitin degradation [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

Organism=Escherichia coli, GI87081726, Length=169, Percent_Identity=31.9526627218935, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 22684; Mature: 22684

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVMTVFAHPDDMEVHCGGTVRKLSSAGHRVIEVIMSKGNNGGDEEVREREAIEGAKCLG
CEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCC
VDRVEFLNHEDGRISVDPESIDAVRALISKFEPDVVFTHSPNDTHQDHRRTFRIVTSAVS
CCHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
KFPEVTVLMGEGPSTVGFQPVVYVDVTDVLEKKLEAVRVHRSQVERGAISEEMVMKTAEF
CCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RGMEIGVKYAEAFEAFRISGSLLLG
CCHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MIVMTVFAHPDDMEVHCGGTVRKLSSAGHRVIEVIMSKGNNGGDEEVREREAIEGAKCLG
CEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCC
VDRVEFLNHEDGRISVDPESIDAVRALISKFEPDVVFTHSPNDTHQDHRRTFRIVTSAVS
CCHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
KFPEVTVLMGEGPSTVGFQPVVYVDVTDVLEKKLEAVRVHRSQVERGAISEEMVMKTAEF
CCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RGMEIGVKYAEAFEAFRISGSLLLG
CCHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA