Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is EhaD

Identifier: 20093912

GI number: 20093912

Start: 435258

End: 435500

Strand: Reverse

Name: EhaD

Synonym: MK0474

Alternate gene names: NA

Gene position: 435500-435258 (Counterclockwise)

Preceding gene: 20093913

Following gene: 20093911

Centisome position: 25.69

GC content: 59.67

Gene sequence:

>243_bases
TTGAACTGGCTCCTCCTCACGTCGCTCACAGCCTGCGTCTTGGGGTCGATCGCCACGGTGTTACGCCGTGACCCACTTCA
GAAGCTTCCTTCGATTGCGCTGGTTAAATCGGGTATGATCTGCGCCGTAGCTGCGGAGGGATACCTCGACGTCGCTGCCG
CCGGTGTGGCCCTCGAGGCGGTAGGGACGATAATGTTCTGCGTGTACCTGATCCGGATTGAGGAGGTGAGGCGAAGTGCA
TGA

Upstream 100 bases:

>100_bases
TAGCGGCCCTGTGTGTGTTCATCTTCTCAACGCTCGAGTCCAATGCCGTCTCCTACACGATCCAAAAGATCGAGGAGATC
AGAAGGGCGGGCGAGTTGGA

Downstream 100 bases:

>100_bases
GTGCGAGGCCATCCTATACACCGGTGCTTTCATGATAATCCTCGGCACGCTAGGGGCGGCGATAGGACCTGCTCGTTCAG
ATCCAGTTGTGAAATCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MNWLLLTSLTACVLGSIATVLRRDPLQKLPSIALVKSGMICAVAAEGYLDVAAAGVALEAVGTIMFCVYLIRIEEVRRSA

Sequences:

>Translated_80_residues
MNWLLLTSLTACVLGSIATVLRRDPLQKLPSIALVKSGMICAVAAEGYLDVAAAGVALEAVGTIMFCVYLIRIEEVRRSA
>Mature_80_residues
MNWLLLTSLTACVLGSIATVLRRDPLQKLPSIALVKSGMICAVAAEGYLDVAAAGVALEAVGTIMFCVYLIRIEEVRRSA

Specific function: Unknown

COG id: COG4039

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8508; Mature: 8508

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLLLTSLTACVLGSIATVLRRDPLQKLPSIALVKSGMICAVAAEGYLDVAAAGVALEA
CCHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
VGTIMFCVYLIRIEEVRRSA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWLLLTSLTACVLGSIATVLRRDPLQKLPSIALVKSGMICAVAAEGYLDVAAAGVALEA
CCHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
VGTIMFCVYLIRIEEVRRSA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA