| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093888
Identifier: 20093888
GI number: 20093888
Start: 420252
End: 420827
Strand: Reverse
Name: 20093888
Synonym: MK0450
Alternate gene names: NA
Gene position: 420827-420252 (Counterclockwise)
Preceding gene: 20093889
Following gene: 20093886
Centisome position: 24.83
GC content: 53.82
Gene sequence:
>576_bases ATGAGCCTCGTTAAGTCCGCGAAGAACGATGTGGTGATAGTGGTCGGTGAGGACATCGACGAGTTCAACAAAGGTGTCCT TTCTTCGGTGTGCAAAGAAACCGGGAAGGTGATCCTGTTCGGTAAGGATTATCTCAATAAATTCTCCATCGATGAGAAAC TCGAAACTTCCGAGGAATCGCTTCCGATCAAGCGTTGTGATGTGGCGATAGTTGATGAAGACACGGAGGTCGATGGGAAG CTTCTCCTGGACGTTCCCGCGGACGAGTACACGATCAACGAGGTGCTCTCCCTGGTCAAAGAGCAGTTCAAAGAAGTGTG CGACTACGAGCGGGGTGTGGAAGCGGACGTTCTCCTCGTCATCGACAGCGATCGTGGTCGGCTACGAATATACGCGAACG GTGACGAGGATGAGGTTGAAGATAAGGCTCGGGAGCTCTGCATGAAAGTGGCAGAGCGCGTGGTGGAGGAGCGTCGGAGC GCGCACATCGACATTCGAACTTACGGATTCGCCCTGGTCTCGGTTGCCCTAGCGATCGTCGTGGTTACGCTGATACTTCG CACGTCTCCGGTGTAA
Upstream 100 bases:
>100_bases CTCATCCCGGTAGACGAACTCCAAGAGGTCGAGGGTGGAGTAAGTGAGACGGCGGGCAACGTTACTGGTCTTAAGGAGGG GCTGGACGATTCCGGAGGTA
Downstream 100 bases:
>100_bases CGCTCACTTCTTCCTAATCTCCACTACATCACCCAGCGTCAGCTCGCCGCTCCCGATCCCCACGGATCCGGTGTCCTCTT CACTCACCCGCTCTAGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSLVKSAKNDVVIVVGEDIDEFNKGVLSSVCKETGKVILFGKDYLNKFSIDEKLETSEESLPIKRCDVAIVDEDTEVDGK LLLDVPADEYTINEVLSLVKEQFKEVCDYERGVEADVLLVIDSDRGRLRIYANGDEDEVEDKARELCMKVAERVVEERRS AHIDIRTYGFALVSVALAIVVVTLILRTSPV
Sequences:
>Translated_191_residues MSLVKSAKNDVVIVVGEDIDEFNKGVLSSVCKETGKVILFGKDYLNKFSIDEKLETSEESLPIKRCDVAIVDEDTEVDGK LLLDVPADEYTINEVLSLVKEQFKEVCDYERGVEADVLLVIDSDRGRLRIYANGDEDEVEDKARELCMKVAERVVEERRS AHIDIRTYGFALVSVALAIVVVTLILRTSPV >Mature_190_residues SLVKSAKNDVVIVVGEDIDEFNKGVLSSVCKETGKVILFGKDYLNKFSIDEKLETSEESLPIKRCDVAIVDEDTEVDGKL LLDVPADEYTINEVLSLVKEQFKEVCDYERGVEADVLLVIDSDRGRLRIYANGDEDEVEDKARELCMKVAERVVEERRSA HIDIRTYGFALVSVALAIVVVTLILRTSPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21357; Mature: 21225
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVKSAKNDVVIVVGEDIDEFNKGVLSSVCKETGKVILFGKDYLNKFSIDEKLETSEES CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHCCHHC LPIKRCDVAIVDEDTEVDGKLLLDVPADEYTINEVLSLVKEQFKEVCDYERGVEADVLLV CCHHHCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IDSDRGRLRIYANGDEDEVEDKARELCMKVAERVVEERRSAHIDIRTYGFALVSVALAIV EECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHH VVTLILRTSPV HHHHHHHCCCC >Mature Secondary Structure SLVKSAKNDVVIVVGEDIDEFNKGVLSSVCKETGKVILFGKDYLNKFSIDEKLETSEES CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHCCHHC LPIKRCDVAIVDEDTEVDGKLLLDVPADEYTINEVLSLVKEQFKEVCDYERGVEADVLLV CCHHHCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IDSDRGRLRIYANGDEDEVEDKARELCMKVAERVVEERRSAHIDIRTYGFALVSVALAIV EECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHH VVTLILRTSPV HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA