| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093885
Identifier: 20093885
GI number: 20093885
Start: 417779
End: 418756
Strand: Reverse
Name: 20093885
Synonym: MK0447
Alternate gene names: NA
Gene position: 418756-417779 (Counterclockwise)
Preceding gene: 20093886
Following gene: 20093882
Centisome position: 24.71
GC content: 61.86
Gene sequence:
>978_bases ATGTCGACCGATTACCTTCCTATAGGGTCACACGAGGTCATCCGCGCCCTTCACGACCTCGAACCCGACGTCGTGGCGTA CCTGCCGGGATTTCCGCTCAACGAGGTCGTCCGCGCACTGGAGGAAAGTGATCATCCGTTCGAGGTCGTACCCGTCGCCT CCGAGTTCGACGCGGTCGGGATCGTGATCGGTCTCGCCCAAGCCGACGGCTACGGTGTCGCCGTGCTCAAGGATAAGGGT GCCTACGTCGCCGCCCAACTCCTAGCCGAGGAGGGTGACTGGCCCGGACTCCTCATCATCGGCTTGGATGCCGATGGCCG CGGTTCCTACACCTGCTCCGTCGAGCTCCCCGACGTCCTACGCGACCTGAAACTCCGCGTCGAGATCCCCGAGACTCAAG ATGATATCTACGAGACCATCCTCGACGCCGCCGAATCCTCCCGAGATGAGCACAGGCTCGCCTGCGTAGTCCTCACCGAG GACCTTCTGCTCTCGAGCCATCCGCCTGGAAAGCCTGAGGTCGAACCTACCGGCGAAGCCGATTGGGACGAGCTCCTCCG TGCCATTGATTTCTACGACACCGTCGCCGTAGTCGTCGGTAAGGGTGTGCTAGGTGACATTTCGAGGGACCTACCGGCGT TCACGTCTTCCCTCAATGACGACCGGGATGCACTGGACCGCCTCGTCGAAATTCTCGAAAGCTTAGGCCTCGACGTCCGC TTGTACTGCACCAAACACGCTTCCAAGTTCCTGCCCGGGATCCCGCCGACGGGTGTCAACACGGGTAACGTCGTCGAGGA GGAACTGCTGGTCCTCGTCGGCGCTTCTTACGACACATTCGCCGTCGACTTCCGCTCCGACTTCGTGGTCTCCGTCAATC CGGATCCCGACGCGTACGCTCACCGCGTCGCCGACGCCCGGTTCGTGATGACCTTGAGCGATTTCGTCCGCGAGCTCGAG TACCGGTCTCGGAAGTGA
Upstream 100 bases:
>100_bases CCATGGGTTTCGACCCCGCCGAGATCGCCGAAAGCGTCGAAGAGGCACTGGAGGTGCTGAAGCGGTGTCGGAAGGAAGGA CCGAGTCTAGTGGAGATGAG
Downstream 100 bases:
>100_bases GGATATCCCGACACTCTTCATGTCATCCGTCGAACCCGCATGCTCAGGTCCAAGGCCGGCGCGGAGTGTGTCAACCACCC GAGCGAGATCACATCAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSTDYLPIGSHEVIRALHDLEPDVVAYLPGFPLNEVVRALEESDHPFEVVPVASEFDAVGIVIGLAQADGYGVAVLKDKG AYVAAQLLAEEGDWPGLLIIGLDADGRGSYTCSVELPDVLRDLKLRVEIPETQDDIYETILDAAESSRDEHRLACVVLTE DLLLSSHPPGKPEVEPTGEADWDELLRAIDFYDTVAVVVGKGVLGDISRDLPAFTSSLNDDRDALDRLVEILESLGLDVR LYCTKHASKFLPGIPPTGVNTGNVVEEELLVLVGASYDTFAVDFRSDFVVSVNPDPDAYAHRVADARFVMTLSDFVRELE YRSRK
Sequences:
>Translated_325_residues MSTDYLPIGSHEVIRALHDLEPDVVAYLPGFPLNEVVRALEESDHPFEVVPVASEFDAVGIVIGLAQADGYGVAVLKDKG AYVAAQLLAEEGDWPGLLIIGLDADGRGSYTCSVELPDVLRDLKLRVEIPETQDDIYETILDAAESSRDEHRLACVVLTE DLLLSSHPPGKPEVEPTGEADWDELLRAIDFYDTVAVVVGKGVLGDISRDLPAFTSSLNDDRDALDRLVEILESLGLDVR LYCTKHASKFLPGIPPTGVNTGNVVEEELLVLVGASYDTFAVDFRSDFVVSVNPDPDAYAHRVADARFVMTLSDFVRELE YRSRK >Mature_324_residues STDYLPIGSHEVIRALHDLEPDVVAYLPGFPLNEVVRALEESDHPFEVVPVASEFDAVGIVIGLAQADGYGVAVLKDKGA YVAAQLLAEEGDWPGLLIIGLDADGRGSYTCSVELPDVLRDLKLRVEIPETQDDIYETILDAAESSRDEHRLACVVLTED LLLSSHPPGKPEVEPTGEADWDELLRAIDFYDTVAVVVGKGVLGDISRDLPAFTSSLNDDRDALDRLVEILESLGLDVRL YCTKHASKFLPGIPPTGVNTGNVVEEELLVLVGASYDTFAVDFRSDFVVSVNPDPDAYAHRVADARFVMTLSDFVRELEY RSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35553; Mature: 35422
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDYLPIGSHEVIRALHDLEPDVVAYLPGFPLNEVVRALEESDHPFEVVPVASEFDAVG CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEE IVIGLAQADGYGVAVLKDKGAYVAAQLLAEEGDWPGLLIIGLDADGRGSYTCSVELPDVL EEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECHHHH RDLKLRVEIPETQDDIYETILDAAESSRDEHRLACVVLTEDLLLSSHPPGKPEVEPTGEA HCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCCCC DWDELLRAIDFYDTVAVVVGKGVLGDISRDLPAFTSSLNDDRDALDRLVEILESLGLDVR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEE LYCTKHASKFLPGIPPTGVNTGNVVEEELLVLVGASYDTFAVDFRSDFVVSVNPDPDAYA EEEEHHHHHHCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEECCCEEEEECCCCHHHH HRVADARFVMTLSDFVRELEYRSRK HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STDYLPIGSHEVIRALHDLEPDVVAYLPGFPLNEVVRALEESDHPFEVVPVASEFDAVG CCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEE IVIGLAQADGYGVAVLKDKGAYVAAQLLAEEGDWPGLLIIGLDADGRGSYTCSVELPDVL EEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECHHHH RDLKLRVEIPETQDDIYETILDAAESSRDEHRLACVVLTEDLLLSSHPPGKPEVEPTGEA HCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCCCC DWDELLRAIDFYDTVAVVVGKGVLGDISRDLPAFTSSLNDDRDALDRLVEILESLGLDVR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEE LYCTKHASKFLPGIPPTGVNTGNVVEEELLVLVGASYDTFAVDFRSDFVVSVNPDPDAYA EEEEHHHHHHCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEECCCEEEEECCCCHHHH HRVADARFVMTLSDFVRELEYRSRK HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA