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The map label for this gene is yhbO [C]

Identifier: 20093847

GI number: 20093847

Start: 389293

End: 389832

Strand: Reverse

Name: yhbO [C]

Synonym: MK0409

Alternate gene names: 20093847

Gene position: 389832-389293 (Counterclockwise)

Preceding gene: 20093850

Following gene: 20093845

Centisome position: 23.0

GC content: 62.41

Gene sequence:

>540_bases
TTGATCGCGGTGCTGGTGGACGACGGGTTTGAGGAGCTCGAGCTCGGCGCGGTCGTGAGTGTACTCTCACGCGGCGGGCT
CGATTGGGATTTGGTGGGGGTCGAGGAGCGTGCTGAAGGGATGGGAGGTATGGAAGTGGGCGTCGACTCCACGGTGTGGG
ACGTCGAGGGGGACGATTACGAGGGTGTGGTCGTGCTCGGCGGATCCGCGCCCACGACGCTGATCGGTTATCGGCACTGC
TTGGACCTTGTCCGGTCTGTAGAATCCGACGGTGGTATGGTAGTGGGCTTATCTTCCGGAGCATTAGTCCTCGCGGAGGC
TGGGGTTCTACGGGGAAGGAAGGCGACCACGTACCCCGGATTTGAGGCGGAGCTCAAGGTGAACGGCGCGGAGCCCGTGC
CTAAAGGGGTGGTGAGGGACGGGAACGTGGTGACTAGTAGGGGCCCAGCGTTCGCAATCGACGCCTGCTTAGAGGTAGTT
CGAGAGCTCTGCGGCGATCACATGGCGAACTCCGTCGCCAGGCAACTCATCCTGAAGTGA

Upstream 100 bases:

>100_bases
CGCTCTATCGTCATACCGGTAGCACGCGTAAATCGCGGAGGAGATCTTCGGTGGGATCTTCGGACACCCCAGGGAGACGA
CGAGCAAGGGAGGTTCCCCC

Downstream 100 bases:

>100_bases
CGACGAACGTCCCCGCCAGGAGGTCGAACGCCCGTTGTCGCGATTCGGTCAGCAGGATCAACGCACCGTCCACGTAGCAC
ACTACGGGTAGGGCCTTCGA

Product: intracellular protease/amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIAVLVDDGFEELELGAVVSVLSRGGLDWDLVGVEERAEGMGGMEVGVDSTVWDVEGDDYEGVVVLGGSAPTTLIGYRHC
LDLVRSVESDGGMVVGLSSGALVLAEAGVLRGRKATTYPGFEAELKVNGAEPVPKGVVRDGNVVTSRGPAFAIDACLEVV
RELCGDHMANSVARQLILK

Sequences:

>Translated_179_residues
MIAVLVDDGFEELELGAVVSVLSRGGLDWDLVGVEERAEGMGGMEVGVDSTVWDVEGDDYEGVVVLGGSAPTTLIGYRHC
LDLVRSVESDGGMVVGLSSGALVLAEAGVLRGRKATTYPGFEAELKVNGAEPVPKGVVRDGNVVTSRGPAFAIDACLEVV
RELCGDHMANSVARQLILK
>Mature_179_residues
MIAVLVDDGFEELELGAVVSVLSRGGLDWDLVGVEERAEGMGGMEVGVDSTVWDVEGDDYEGVVVLGGSAPTTLIGYRHC
LDLVRSVESDGGMVVGLSSGALVLAEAGVLRGRKATTYPGFEAELKVNGAEPVPKGVVRDGNVVTSRGPAFAIDACLEVV
RELCGDHMANSVARQLILK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Drosophila melanogaster, GI28571932, Length=178, Percent_Identity=32.0224719101124, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24653499, Length=178, Percent_Identity=29.2134831460674, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 18658; Mature: 18658

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVLVDDGFEELELGAVVSVLSRGGLDWDLVGVEERAEGMGGMEVGVDSTVWDVEGDDY
CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCEEECCCCEEEECCCCCC
EGVVVLGGSAPTTLIGYRHCLDLVRSVESDGGMVVGLSSGALVLAEAGVLRGRKATTYPG
CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHCCCCCCCCCC
FEAELKVNGAEPVPKGVVRDGNVVTSRGPAFAIDACLEVVRELCGDHMANSVARQLILK
CEEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAVLVDDGFEELELGAVVSVLSRGGLDWDLVGVEERAEGMGGMEVGVDSTVWDVEGDDY
CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCEEECCCCEEEECCCCCC
EGVVVLGGSAPTTLIGYRHCLDLVRSVESDGGMVVGLSSGALVLAEAGVLRGRKATTYPG
CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHCCCCCCCCCC
FEAELKVNGAEPVPKGVVRDGNVVTSRGPAFAIDACLEVVRELCGDHMANSVARQLILK
CEEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]