Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093843

Identifier: 20093843

GI number: 20093843

Start: 386095

End: 386403

Strand: Direct

Name: 20093843

Synonym: MK0405

Alternate gene names: NA

Gene position: 386095-386403 (Clockwise)

Preceding gene: 20093841

Following gene: 20093844

Centisome position: 22.78

GC content: 59.55

Gene sequence:

>309_bases
GTGTCCGGAACGATCAAACTGAGCCGGTGTGGTCTTCGGGCTCCCACGTGCGAGCCCGTCCGGAGATCCTACTTCGAACG
ACTTCGCAGATACCGCGATTATCAAGTGAGGGAGCTCTATGAGTCAGGTGTACGGATAAAGGTGTTGGCCCGAGTGTTCG
ACCTCTCCGAAGGGGAGATCAAAGAAATCCTCCTCTCGCCGCCGCGGTGCGCGCGCTGCGGCAAACCGCTCCGCACGAAC
GTGCCACTATGCTCCGAGTGCGAACGGGTGCTGGAGGGAGATGATAGGAGCCGTACTGATGGGAGGTAA

Upstream 100 bases:

>100_bases
CTGATCCACTCGACGGTGTTCGTGAACAGCCAGGCACCCAGGAGCAAGGCCCCGAAGCTGGCCGCTATCTGCGCTATCAG
CGTCAAGGGGGCCAGTCCCC

Downstream 100 bases:

>100_bases
GGGCCGAAGGCTCGGCGGCGACAAACCTTGGCTGACGGTGAACGGTCGGCCGATCGTAGAATGGGCGACGGAAATGCTGC
GTAGGATCGGTTGCGAGGAG

Product: Zn-ribbon-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSGTIKLSRCGLRAPTCEPVRRSYFERLRRYRDYQVRELYESGVRIKVLARVFDLSEGEIKEILLSPPRCARCGKPLRTN
VPLCSECERVLEGDDRSRTDGR

Sequences:

>Translated_102_residues
MSGTIKLSRCGLRAPTCEPVRRSYFERLRRYRDYQVRELYESGVRIKVLARVFDLSEGEIKEILLSPPRCARCGKPLRTN
VPLCSECERVLEGDDRSRTDGR
>Mature_101_residues
SGTIKLSRCGLRAPTCEPVRRSYFERLRRYRDYQVRELYESGVRIKVLARVFDLSEGEIKEILLSPPRCARCGKPLRTNV
PLCSECERVLEGDDRSRTDGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11836; Mature: 11705

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTIKLSRCGLRAPTCEPVRRSYFERLRRYRDYQVRELYESGVRIKVLARVFDLSEGEI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCHH
KEILLSPPRCARCGKPLRTNVPLCSECERVLEGDDRSRTDGR
HHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SGTIKLSRCGLRAPTCEPVRRSYFERLRRYRDYQVRELYESGVRIKVLARVFDLSEGEI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCHH
KEILLSPPRCARCGKPLRTNVPLCSECERVLEGDDRSRTDGR
HHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA