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The map label for this gene is 20093840

Identifier: 20093840

GI number: 20093840

Start: 382222

End: 383223

Strand: Direct

Name: 20093840

Synonym: MK0402

Alternate gene names: NA

Gene position: 382222-383223 (Clockwise)

Preceding gene: 20093833

Following gene: 20093841

Centisome position: 22.55

GC content: 61.18

Gene sequence:

>1002_bases
ATGGAGCTGCTCCTAACGCTCGCCCCGGACGTTCGACCGGAGGAGACCGAGAGAATGGCGCGGAAGATACAGGACAAGCT
CAAACTACCCGCGGAGCCCGATCCCCTGAAACCGGTTCGCAGGCTTAGGATCGAGGGTGTAGAAGACCCCGACGGAATCG
TCAGTAAGCTGAGAGAAGAGTTCCCGGAGGTCTCTCGAGTCGTGATCGTGAAGCGCCGAGGTCGGTCTCACGATCTCGAT
AGGATCGCCGCGCAGGCTGCCAAGCTCGCGAGAGGTGAGATACTGCCGCACCATACCTTCGCCGTCGACGCCCGGAGGCT
CGACAAGGATCTTCCCTACACGTCCCGCGATCTGGCCATCAAGGTCGGCGAAGCGGTGCGACGGGTTACGGGTGCGTCCG
TAGACCTCGACAGTCCGGACCGGTACGTGGACGTCCACGTGTCTCGACACGGGCACCTAATCGGGATCACCCCAGCAACA
CTGAGGGAGCCACACCGGAGTTGGCTTCCATCCGGCGCCTTTAAGCACGTTCACGTATGCTGTGAGCGACCGGAGACGGA
GTACGAGATCGCCGACTTAATCCGGATAACCGCGGCACTGGGACTGGGAAGCCTGATACTGGTAGAACCGAACCGGGACG
CCGTTCGAGGGGCCGAGGAAAAGGTGGGGGCTTCTTCGCTTATCGACCTTCGAATCGAAGAGGATCTGAAAGAAGCCTTA
GCAGAGTTCGACGTCGTAGTCGGCTTACATCCGACAGCGCCGAACGCTGAGAGTGAACTCCTACGAGCGGTGGAAGGAGC
GAACCAGATCTGCCTCCTAACGGGATCGGAAACTAAGGGACTCAGTCGAGAGGCGAAGGAGCTCGCGGACGTGCTCGTAC
ACCTCGGACCGACGACGGCCGAGCCTATGCGGACCGCCAACGCGGTAGCGTACGCTGTAGGTGTGCTGGCCGCCAGGACG
GTTAGCCTAGGGTCAGCCACCGCTCCCACTCTTCATCGGTGA

Upstream 100 bases:

>100_bases
GGGCCCTATGAGCCCCGCGCTCTACCAGGCTAAGCTGCCCCGGCTACGCCCGCGGGGAACTCCCCTCTCGAATTAAAAAA
GTTACGTGGGGTAGCCCCCT

Downstream 100 bases:

>100_bases
CACCTCGTAGACCCGGTTGACACATCATCCCCGACCCATGGGAAAAGTCGCTTTACGGACCACCGAGTCGCCAGTCCAGG
GAGTGTCCGGTTTGGTCCTA

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MELLLTLAPDVRPEETERMARKIQDKLKLPAEPDPLKPVRRLRIEGVEDPDGIVSKLREEFPEVSRVVIVKRRGRSHDLD
RIAAQAAKLARGEILPHHTFAVDARRLDKDLPYTSRDLAIKVGEAVRRVTGASVDLDSPDRYVDVHVSRHGHLIGITPAT
LREPHRSWLPSGAFKHVHVCCERPETEYEIADLIRITAALGLGSLILVEPNRDAVRGAEEKVGASSLIDLRIEEDLKEAL
AEFDVVVGLHPTAPNAESELLRAVEGANQICLLTGSETKGLSREAKELADVLVHLGPTTAEPMRTANAVAYAVGVLAART
VSLGSATAPTLHR

Sequences:

>Translated_333_residues
MELLLTLAPDVRPEETERMARKIQDKLKLPAEPDPLKPVRRLRIEGVEDPDGIVSKLREEFPEVSRVVIVKRRGRSHDLD
RIAAQAAKLARGEILPHHTFAVDARRLDKDLPYTSRDLAIKVGEAVRRVTGASVDLDSPDRYVDVHVSRHGHLIGITPAT
LREPHRSWLPSGAFKHVHVCCERPETEYEIADLIRITAALGLGSLILVEPNRDAVRGAEEKVGASSLIDLRIEEDLKEAL
AEFDVVVGLHPTAPNAESELLRAVEGANQICLLTGSETKGLSREAKELADVLVHLGPTTAEPMRTANAVAYAVGVLAART
VSLGSATAPTLHR
>Mature_333_residues
MELLLTLAPDVRPEETERMARKIQDKLKLPAEPDPLKPVRRLRIEGVEDPDGIVSKLREEFPEVSRVVIVKRRGRSHDLD
RIAAQAAKLARGEILPHHTFAVDARRLDKDLPYTSRDLAIKVGEAVRRVTGASVDLDSPDRYVDVHVSRHGHLIGITPAT
LREPHRSWLPSGAFKHVHVCCERPETEYEIADLIRITAALGLGSLILVEPNRDAVRGAEEKVGASSLIDLRIEEDLKEAL
AEFDVVVGLHPTAPNAESELLRAVEGANQICLLTGSETKGLSREAKELADVLVHLGPTTAEPMRTANAVAYAVGVLAART
VSLGSATAPTLHR

Specific function: Unknown

COG id: COG1818

COG function: function code R; Predicted RNA-binding protein, contains THUMP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36439; Mature: 36439

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS51165 THUMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLLTLAPDVRPEETERMARKIQDKLKLPAEPDPLKPVRRLRIEGVEDPDGIVSKLREE
CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
FPEVSRVVIVKRRGRSHDLDRIAAQAAKLARGEILPHHTFAVDARRLDKDLPYTSRDLAI
HHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHEE
KVGEAVRRVTGASVDLDSPDRYVDVHVSRHGHLIGITPATLREPHRSWLPSGAFKHVHVC
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECHHHHHCCHHHCCCCCCHHHHHHH
CERPETEYEIADLIRITAALGLGSLILVEPNRDAVRGAEEKVGASSLIDLRIEEDLKEAL
HCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCHHHCCCHHHEEEEEHHHHHHHH
AEFDVVVGLHPTAPNAESELLRAVEGANQICLLTGSETKGLSREAKELADVLVHLGPTTA
HHHHEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
EPMRTANAVAYAVGVLAARTVSLGSATAPTLHR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MELLLTLAPDVRPEETERMARKIQDKLKLPAEPDPLKPVRRLRIEGVEDPDGIVSKLREE
CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
FPEVSRVVIVKRRGRSHDLDRIAAQAAKLARGEILPHHTFAVDARRLDKDLPYTSRDLAI
HHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHEE
KVGEAVRRVTGASVDLDSPDRYVDVHVSRHGHLIGITPATLREPHRSWLPSGAFKHVHVC
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECHHHHHCCHHHCCCCCCHHHHHHH
CERPETEYEIADLIRITAALGLGSLILVEPNRDAVRGAEEKVGASSLIDLRIEEDLKEAL
HCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCHHHCCCHHHEEEEEHHHHHHHH
AEFDVVVGLHPTAPNAESELLRAVEGANQICLLTGSETKGLSREAKELADVLVHLGPTTA
HHHHEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
EPMRTANAVAYAVGVLAARTVSLGSATAPTLHR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA