| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093839
Identifier: 20093839
GI number: 20093839
Start: 380949
End: 382022
Strand: Reverse
Name: 20093839
Synonym: MK0401
Alternate gene names: NA
Gene position: 382022-380949 (Counterclockwise)
Preceding gene: 20093842
Following gene: 20093838
Centisome position: 22.54
GC content: 62.1
Gene sequence:
>1074_bases TTGGGGGAACCGGCGGCGGTGCCCCGCGCGGCGGAGCTCCGTCTTGTGAAGTGTCCTCCACCCCGTCATTTTCCCGAGAT GGTGAAACTATCCAGGGCGTTATTTCGACTTCTGGTGGAGGAGCACGGTACCGACGGGGCTCTGGAGAAGCTCGCGGATC CGAGATGGTTCCAATCCCTGGCGTGTCTGCTAGGGTACGAGCGGAACACATCCGGTAGTACTACAGTCGTCACGGCGGCA CTCCGTGAGGCGTTGGATCCCGAAGAACACGGGATCGCCGTCGCGGGTGGGAAGGGACGACTGGCCCTTGAGACCCCGAA GCGCGTGCGGGAGCTCGCAGATCGGATGAATTTGGATCCCCGACAGTTGGTGACGGCCAGCCGTCTAACGGCACGGTCGG ATTCCGTATGCCTCCAAGATGGTCACGACCTCTACCACCACGTTATCGTGTTCGATGAAAACGGTCGGTGGGTGGTGATC CAGCAGGGGATGGACGTCGATCGGAAGACCGCGCGACGTTACCACTGGCTCGACAGCGAAGTCTCGGAGTTCGTGGAGGG ACATCCGGTGGTGGCGGATGAGACGAGGAAAGTCCTGTCGCTTCAAGGGGATCGAGCCGATAAGTGTCGGGAGGCTGTAC TCGATCTGGTTGGGGACGGTCCGGACCGCGTGTTGCGAGAGTGGAGGGCGGTCAGGAACAGCATCTCAGGACCGCTCGAC GAATACCTGGGCAGAGAGGGCGGTGTCGAAGTACCCGACGGATGGGTGCCAAGGCGTCTCGATCGAGACGCTCTGCGGCG CCTGTACGAGGTTAATCCGACAGATTTCAAGGAGTTCCTGACAGTGCGCGGCGTCGGACCGAGTCTAGTCCGTGCCCTGG CGTTGATCGCCGAAGTAGTGTACGGAGAAGGGCCCGACCGTCGTGATCCCGCCGAGTACACCGCGGCTTTCGGCTGCAAG TCCGGGGATCCTTACCCGGTGCATCGAGAGCTCATGAGACTCGCGGCCGAGCTGCTGGAGCGGATAAGGTCTCCTCGGCT CCGCCGCTTCTTGGGCCGTGTGACCGAGTCTTAA
Upstream 100 bases:
>100_bases CGATGACCCCGAGGGGTGACCGGCCTGGGATACCCCGAGGTCCCGGGTTCAAATCCCGGCCCCGGCACCAAGCCAGGAAC CGTTACGAAATTCATAACGT
Downstream 100 bases:
>100_bases AATATCTGTACGGATCGTTCTGTTTCGGAGAACGTTCAGGGGGTGAGCACCGGATGCTCATCTGCGTGGTCGGAATGCCG GGGGCTGGTAAAGGTGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MGEPAAVPRAAELRLVKCPPPRHFPEMVKLSRALFRLLVEEHGTDGALEKLADPRWFQSLACLLGYERNTSGSTTVVTAA LREALDPEEHGIAVAGGKGRLALETPKRVRELADRMNLDPRQLVTASRLTARSDSVCLQDGHDLYHHVIVFDENGRWVVI QQGMDVDRKTARRYHWLDSEVSEFVEGHPVVADETRKVLSLQGDRADKCREAVLDLVGDGPDRVLREWRAVRNSISGPLD EYLGREGGVEVPDGWVPRRLDRDALRRLYEVNPTDFKEFLTVRGVGPSLVRALALIAEVVYGEGPDRRDPAEYTAAFGCK SGDPYPVHRELMRLAAELLERIRSPRLRRFLGRVTES
Sequences:
>Translated_357_residues MGEPAAVPRAAELRLVKCPPPRHFPEMVKLSRALFRLLVEEHGTDGALEKLADPRWFQSLACLLGYERNTSGSTTVVTAA LREALDPEEHGIAVAGGKGRLALETPKRVRELADRMNLDPRQLVTASRLTARSDSVCLQDGHDLYHHVIVFDENGRWVVI QQGMDVDRKTARRYHWLDSEVSEFVEGHPVVADETRKVLSLQGDRADKCREAVLDLVGDGPDRVLREWRAVRNSISGPLD EYLGREGGVEVPDGWVPRRLDRDALRRLYEVNPTDFKEFLTVRGVGPSLVRALALIAEVVYGEGPDRRDPAEYTAAFGCK SGDPYPVHRELMRLAAELLERIRSPRLRRFLGRVTES >Mature_356_residues GEPAAVPRAAELRLVKCPPPRHFPEMVKLSRALFRLLVEEHGTDGALEKLADPRWFQSLACLLGYERNTSGSTTVVTAAL REALDPEEHGIAVAGGKGRLALETPKRVRELADRMNLDPRQLVTASRLTARSDSVCLQDGHDLYHHVIVFDENGRWVVIQ QGMDVDRKTARRYHWLDSEVSEFVEGHPVVADETRKVLSLQGDRADKCREAVLDLVGDGPDRVLREWRAVRNSISGPLDE YLGREGGVEVPDGWVPRRLDRDALRRLYEVNPTDFKEFLTVRGVGPSLVRALALIAEVVYGEGPDRRDPAEYTAAFGCKS GDPYPVHRELMRLAAELLERIRSPRLRRFLGRVTES
Specific function: Unknown
COG id: COG1415
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40121; Mature: 39990
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEPAAVPRAAELRLVKCPPPRHFPEMVKLSRALFRLLVEEHGTDGALEKLADPRWFQSL CCCCCCCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH ACLLGYERNTSGSTTVVTAALREALDPEEHGIAVAGGKGRLALETPKRVRELADRMNLDP HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCHHHHHHHHHHCCCCH RQLVTASRLTARSDSVCLQDGHDLYHHVIVFDENGRWVVIQQGMDVDRKTARRYHWLDSE HHHHHHHHHHHCCCCHHHHCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHH VSEFVEGHPVVADETRKVLSLQGDRADKCREAVLDLVGDGPDRVLREWRAVRNSISGPLD HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH EYLGREGGVEVPDGWVPRRLDRDALRRLYEVNPTDFKEFLTVRGVGPSLVRALALIAEVV HHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH YGEGPDRRDPAEYTAAFGCKSGDPYPVHRELMRLAAELLERIRSPRLRRFLGRVTES HCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC >Mature Secondary Structure GEPAAVPRAAELRLVKCPPPRHFPEMVKLSRALFRLLVEEHGTDGALEKLADPRWFQSL CCCCCCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH ACLLGYERNTSGSTTVVTAALREALDPEEHGIAVAGGKGRLALETPKRVRELADRMNLDP HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCHHHHHHHHHHCCCCH RQLVTASRLTARSDSVCLQDGHDLYHHVIVFDENGRWVVIQQGMDVDRKTARRYHWLDSE HHHHHHHHHHHCCCCHHHHCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHH VSEFVEGHPVVADETRKVLSLQGDRADKCREAVLDLVGDGPDRVLREWRAVRNSISGPLD HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH EYLGREGGVEVPDGWVPRRLDRDALRRLYEVNPTDFKEFLTVRGVGPSLVRALALIAEVV HHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH YGEGPDRRDPAEYTAAFGCKSGDPYPVHRELMRLAAELLERIRSPRLRRFLGRVTES HCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA