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The map label for this gene is GimC

Identifier: 20093813

GI number: 20093813

Start: 364113

End: 364475

Strand: Reverse

Name: GimC

Synonym: MK0375

Alternate gene names: 20093813

Gene position: 364475-364113 (Counterclockwise)

Preceding gene: 20093814

Following gene: 20093810

Centisome position: 21.5

GC content: 55.1

Gene sequence:

>363_bases
ATGGCGCAGAATGTGGAGCAGCAGGTGGCTCAGCTCCAGCAGCTTCAGCAGCAGTTGAGCTCCATCGTCGCGCAAAAGCA
GCAGCTGGAGCTGCAGCTTAGGGAGATCGAAAGGGCCCTGAAGGAACTCGACGAAATCGAGGAAGATACCAAGGTATACA
AAACTGTTGGTGGCTTGCTGATAGAAGCTGACCGTGATGAGGTGAAGGAAGAGCTCGAGGACAGAAAAGAAACACTGGAG
CTAAGGGTAAAAACACTAGAGAAGCAAGAAAAACGCCTCCAGCAGCAGATCGAGAACCTCCAGAAGAGGCTCCAGAAGGC
TCTTCAGCAGGCCGAGGGAGGTGGCGGGGCCGGAGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCGGAAGACGTGTCGGCACTCCGAGCATCAGCCTCCGGAGTGTTCCGTCTCCTCGCGCTCTCAGAGCGGGTCATCACGA
CGGTTCTGGGGGACGTGTAG

Downstream 100 bases:

>100_bases
AGCTCGAAGACATCGAACGCATCCACGAAGCAGCTCTCCGGGAGCTCTATCGCAGGATTCCGAAGCGTGACTTGGAGGAC
GTTGACGTAACGGTGACGGT

Product: prefoldin, chaperonin cofactor

Products: NA

Alternate protein names: GimC subunit beta

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAQNVEQQVAQLQQLQQQLSSIVAQKQQLELQLREIERALKELDEIEEDTKVYKTVGGLLIEADRDEVKEELEDRKETLE
LRVKTLEKQEKRLQQQIENLQKRLQKALQQAEGGGGAGAA

Sequences:

>Translated_120_residues
MAQNVEQQVAQLQQLQQQLSSIVAQKQQLELQLREIERALKELDEIEEDTKVYKTVGGLLIEADRDEVKEELEDRKETLE
LRVKTLEKQEKRLQQQIENLQKRLQKALQQAEGGGGAGAA
>Mature_119_residues
AQNVEQQVAQLQQLQQQLSSIVAQKQQLELQLREIERALKELDEIEEDTKVYKTVGGLLIEADRDEVKEELEDRKETLEL
RVKTLEKQEKRLQQQIENLQKRLQKALQQAEGGGGAGAA

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PFDB_METKA (Q8TYC7)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613660.1
- ProteinModelPortal:   Q8TYC7
- SMR:   Q8TYC7
- GeneID:   1477678
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0375
- NMPDR:   fig|190192.1.peg.373
- OMA:   ELPPQIQ
- BioCyc:   MKAN190192:MK0375-MONOMER
- HAMAP:   MF_00307
- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053
- TIGRFAMs:   TIGR02338

Pfam domain/function: PF01920 Prefoldin_2; SSF46579 Prefoldin

EC number: NA

Molecular weight: Translated: 13749; Mature: 13618

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNVEQQVAQLQQLQQQLSSIVAQKQQLELQLREIERALKELDEIEEDTKVYKTVGGLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEADRDEVKEELEDRKETLELRVKTLEKQEKRLQQQIENLQKRLQKALQQAEGGGGAGAA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AQNVEQQVAQLQQLQQQLSSIVAQKQQLELQLREIERALKELDEIEEDTKVYKTVGGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEADRDEVKEELEDRKETLELRVKTLEKQEKRLQQQIENLQKRLQKALQQAEGGGGAGAA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014