| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is yhhP [C]
Identifier: 20093795
GI number: 20093795
Start: 345630
End: 346286
Strand: Reverse
Name: yhhP [C]
Synonym: MK0357
Alternate gene names: 20093795
Gene position: 346286-345630 (Counterclockwise)
Preceding gene: 20093796
Following gene: 20093794
Centisome position: 20.43
GC content: 54.64
Gene sequence:
>657_bases ATGAAGCCCGATCGGCGGCTTGACGTGCGTGGTGCGGCCTGTCCTGGGCCGTCCGTAATGGTGGCGGAAGAACTCAAGGA AATGGAGCCCGGACAGGTGCTGGAAGTTATCGTCGACTCGGAGGGTATTGCCAACGACATAAGGGAACTAGTTCAGGATG GAGGACATGAGGTGTTGAAGGTTGAAGAAACGGATGGAGACATACGCATGCTGATCCGCGTCGGTGGCGTCGAGACCGAT AGTACCGCGACCGACGGTACCGTTAGGACGTGTGCCGGATCATTACCGTCGACCGACACGGATTCGGTTATGATAGCACA AAGTACCGGCGTCGCTAATCCGGAGCGTGCGTACGCGACGTTCCTAATGTCGGAGGCAGCGTTGGCGATGGATTTGGACG TCGTAATCTTCGGCTTCATGGACGGTGTCACCGTGCTCGTTGAGCGAGAAGTTGAAAGAATCCGACATCCAGAATTTCCT CCGCTGATAGATAAGGCCCGGGAAGTCCTGAGAAACGTCGAGGCATGCGCTTGTGAATTAAGCATTCAAGCCAGGGGTAT CACTTCCGACGATCTCCTGGATGGTGTCAAAGTCGTCGGAGCTTCAAAGTTTCTCAAGCTAATCACGGATCCGGGTGTGG ATGTGGTTTGGCTATAA
Upstream 100 bases:
>100_bases TGTTATGTCGTCGGACCAGGGGATCGGAAAACTTAAATTGCCTCCAACGATTGTTCTCGTTTGATCGACAATCGCGAACA ATCGCACAGGGGACACAATC
Downstream 100 bases:
>100_bases GCGAGATAATTCTCGCGGGACTCTCCGCCGGCGTTGCAATTGAATTCGCTATGCCCGCTATGATCCGTCGATCTCTCCCG CTCAGACTGGCTGTCATCCT
Product: peroxiredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKPDRRLDVRGAACPGPSVMVAEELKEMEPGQVLEVIVDSEGIANDIRELVQDGGHEVLKVEETDGDIRMLIRVGGVETD STATDGTVRTCAGSLPSTDTDSVMIAQSTGVANPERAYATFLMSEAALAMDLDVVIFGFMDGVTVLVEREVERIRHPEFP PLIDKAREVLRNVEACACELSIQARGITSDDLLDGVKVVGASKFLKLITDPGVDVVWL
Sequences:
>Translated_218_residues MKPDRRLDVRGAACPGPSVMVAEELKEMEPGQVLEVIVDSEGIANDIRELVQDGGHEVLKVEETDGDIRMLIRVGGVETD STATDGTVRTCAGSLPSTDTDSVMIAQSTGVANPERAYATFLMSEAALAMDLDVVIFGFMDGVTVLVEREVERIRHPEFP PLIDKAREVLRNVEACACELSIQARGITSDDLLDGVKVVGASKFLKLITDPGVDVVWL >Mature_218_residues MKPDRRLDVRGAACPGPSVMVAEELKEMEPGQVLEVIVDSEGIANDIRELVQDGGHEVLKVEETDGDIRMLIRVGGVETD STATDGTVRTCAGSLPSTDTDSVMIAQSTGVANPERAYATFLMSEAALAMDLDVVIFGFMDGVTVLVEREVERIRHPEFP PLIDKAREVLRNVEACACELSIQARGITSDDLLDGVKVVGASKFLKLITDPGVDVVWL
Specific function: Unknown
COG id: COG2044
COG function: function code R; Predicted peroxiredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 - InterPro: IPR003787 [H]
Pfam domain/function: PF02635 DrsE; PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 23496; Mature: 23496
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDRRLDVRGAACPGPSVMVAEELKEMEPGQVLEVIVDSEGIANDIRELVQDGGHEVLK CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEE VEETDGDIRMLIRVGGVETDSTATDGTVRTCAGSLPSTDTDSVMIAQSTGVANPERAYAT EEECCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHH FLMSEAALAMDLDVVIFGFMDGVTVLVEREVERIRHPEFPPLIDKAREVLRNVEACACEL HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEE SIQARGITSDDLLDGVKVVGASKFLKLITDPGVDVVWL EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MKPDRRLDVRGAACPGPSVMVAEELKEMEPGQVLEVIVDSEGIANDIRELVQDGGHEVLK CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEE VEETDGDIRMLIRVGGVETDSTATDGTVRTCAGSLPSTDTDSVMIAQSTGVANPERAYAT EEECCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHH FLMSEAALAMDLDVVIFGFMDGVTVLVEREVERIRHPEFPPLIDKAREVLRNVEACACEL HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEE SIQARGITSDDLLDGVKVVGASKFLKLITDPGVDVVWL EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]