| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093791
Identifier: 20093791
GI number: 20093791
Start: 342379
End: 343095
Strand: Reverse
Name: 20093791
Synonym: MK0353
Alternate gene names: NA
Gene position: 343095-342379 (Counterclockwise)
Preceding gene: 20093793
Following gene: 20093789
Centisome position: 20.24
GC content: 61.37
Gene sequence:
>717_bases GTGGGTAACGTGCCGAGGTGTCGGCGTTGTGGATATTCCGTCGAATTACCTCTTAAATGTCCCCGTTGCGGGGAGCCGTC CTTCGAAGTCGCCGCATTTCAAGTCTACCCGGAGGATGTCAGGTACGTCGTAGCGTTCGTCAACGAGAGCGACGTTCACA CAATCCACCAGTCGTTTCAAGGAGATCCGGACGGGATCATGCTTCGCAACCTTGTGGAGAGGCTAGGGGAGCTTCTCCAC TCAGCCGCACCACGCGCCGCGACGGCTGTCCGCACCCCACCGTGGATAGTTGACGTCGTAGAGCGAATATCCGGAGTGAC TGTCCGCACGGTGAGGGACGATTTCGACGACGTCGTAAGGTCCCTGCAGGCCGAGCTTCGGGCCGACCGGCGGCTGGACC GCGTCGAAGAACCCCCGGAGCGTAAGTTAGGCGGTAGTCACTCGACGATCATCGGTGGTCGGCGGGGGAGGGAACTCGTA CTCAAGGTGGCTTCCGTGCCCTACGTCAAGAGGGTGATCCCGGGTCGTATAGGGGCCAAGGGATCGCGGGGAGGTGGAGG AGTTCGACTGAAGGTGTCGCGGGTCGATGACAGTGGTAACGTGAAGCTGCTCCTCTCCGAAGGGGCGGCTACCCAGGAGA TTTTCGTGGTGACCACCGCCCGGGACGAGCGAGAAGGTAAGCTCGTGGCCGAGCTGCTCGAGCGGGTCATTCGATGA
Upstream 100 bases:
>100_bases ATACGGTCGCCGTAGCTGAGCACCCTAAGTTTCACCAACTTCTCCTTGTGCCTATTAAGTATCTCCATGATCATAGCTCA GAACATCCCCCAGTGCGAGG
Downstream 100 bases:
>100_bases GCTTTCTCTCCTTCTTTCGCGGTGGACGCACCGTAACGACTGCTAACGCCTTCTCGCCCTCTCGGGCGAGCACCAACGTA CGCGCTTCTCCCGAGAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MGNVPRCRRCGYSVELPLKCPRCGEPSFEVAAFQVYPEDVRYVVAFVNESDVHTIHQSFQGDPDGIMLRNLVERLGELLH SAAPRAATAVRTPPWIVDVVERISGVTVRTVRDDFDDVVRSLQAELRADRRLDRVEEPPERKLGGSHSTIIGGRRGRELV LKVASVPYVKRVIPGRIGAKGSRGGGGVRLKVSRVDDSGNVKLLLSEGAATQEIFVVTTARDEREGKLVAELLERVIR
Sequences:
>Translated_238_residues MGNVPRCRRCGYSVELPLKCPRCGEPSFEVAAFQVYPEDVRYVVAFVNESDVHTIHQSFQGDPDGIMLRNLVERLGELLH SAAPRAATAVRTPPWIVDVVERISGVTVRTVRDDFDDVVRSLQAELRADRRLDRVEEPPERKLGGSHSTIIGGRRGRELV LKVASVPYVKRVIPGRIGAKGSRGGGGVRLKVSRVDDSGNVKLLLSEGAATQEIFVVTTARDEREGKLVAELLERVIR >Mature_237_residues GNVPRCRRCGYSVELPLKCPRCGEPSFEVAAFQVYPEDVRYVVAFVNESDVHTIHQSFQGDPDGIMLRNLVERLGELLHS AAPRAATAVRTPPWIVDVVERISGVTVRTVRDDFDDVVRSLQAELRADRRLDRVEEPPERKLGGSHSTIIGGRRGRELVL KVASVPYVKRVIPGRIGAKGSRGGGGVRLKVSRVDDSGNVKLLLSEGAATQEIFVVTTARDEREGKLVAELLERVIR
Specific function: Unknown
COG id: COG4031
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26287; Mature: 26155
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVPRCRRCGYSVELPLKCPRCGEPSFEVAAFQVYPEDVRYVVAFVNESDVHTIHQSFQ CCCCCCHHHCCCCEECCCCCCCCCCCCCEEEEEEECHHHHEEEEEEECCCHHHHHHHHHC GDPDGIMLRNLVERLGELLHSAAPRAATAVRTPPWIVDVVERISGVTVRTVRDDFDDVVR CCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHH SLQAELRADRRLDRVEEPPERKLGGSHSTIIGGRRGRELVLKVASVPYVKRVIPGRIGAK HHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCHHHHHHHHCCCHHHHHCCCCCCCC GSRGGGGVRLKVSRVDDSGNVKLLLSEGAATQEIFVVTTARDEREGKLVAELLERVIR CCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHC >Mature Secondary Structure GNVPRCRRCGYSVELPLKCPRCGEPSFEVAAFQVYPEDVRYVVAFVNESDVHTIHQSFQ CCCCCHHHCCCCEECCCCCCCCCCCCCEEEEEEECHHHHEEEEEEECCCHHHHHHHHHC GDPDGIMLRNLVERLGELLHSAAPRAATAVRTPPWIVDVVERISGVTVRTVRDDFDDVVR CCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHH SLQAELRADRRLDRVEEPPERKLGGSHSTIIGGRRGRELVLKVASVPYVKRVIPGRIGAK HHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCHHHHHHHHCCCHHHHHCCCCCCCC GSRGGGGVRLKVSRVDDSGNVKLLLSEGAATQEIFVVTTARDEREGKLVAELLERVIR CCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA