| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093777
Identifier: 20093777
GI number: 20093777
Start: 330946
End: 332115
Strand: Direct
Name: 20093777
Synonym: MK0339
Alternate gene names: NA
Gene position: 330946-332115 (Clockwise)
Preceding gene: 20093774
Following gene: 20093779
Centisome position: 19.53
GC content: 59.66
Gene sequence:
>1170_bases ATGTTCCCTAGAACCCTGATACCCTTAATCTCCGCCATTCTACTCGCTACGCCCGCCTGTGCTACCGATGTCGGGGTATT CGCGTGGGGAAGCACGATAAGGTCCGAAGGCGTCCAAAAGTTCACGGACGATATCCTCAGCACGGGCTACACCGAGGTGG CCGTATTAATCCGGGGGGTCAGCACCCCGACGCGCGTCGACACGCTCTCGGCAGTGTACTCCCAGATCAAAGCGAGGAAC CCGAACGTCAAGGTATACGCCTGGATCGTGGGGTTCGAACGTAAGGACGGCTGGGACAAGCCATGGGATCCGGAGGTACG TAGGGAAATCCTTGACGCCGTGCGGTCGGCGTTACCGTACTGCGACGGGATAATACTGGACGATTCCTTCCGGTACCCGA CGAGCAACCCCGTCAAGCGCGAGAAAGCCATGCAGGCCATCACCGACCTCGTACGTGAGATCTCAGAACTCGCGCACTCC CACGGTAAGGCGGTGTACTTCTGCCTACTACCGGAGAAGCCGGAGCCGTACTCCATCGACCGAGACGCGATCGCGACCTA CGTGGACAAGTTCATCGTCGAGGCTTACACCGAGGAGTACGGAAGGGACGACGAGTGGCCCGTCAGGGTGTACAACCTGT ACGAACGGCTCTATCCGGGTAAGGTGGCGATAGCGCTCCACGAGCTGAACGAGAGTCGTCTGGCGCATCAGCTAACGCTG CTGAAGGAGGCCGGCTGTCCGGACATATGGCTCTTCAGGTACGGAGAGGTCAAGAAGATGGGGCTCGTACGTGACGTCAT AAGGTCCATCACGGGGTCCGCGAGCGGTACGTCCTTACAGTGGAGTCCGGTGGAAGGCGGACAGTTCGACCTAGCGGGCC TGCTGCTGACTGGACTGGTGCTCGGGACGTTCGGAGGACTAGTACTGGCCATCGTCAATCCGGAGCTGTTGAACTCGCTG GGACAAGCGGCGATCGGAATCGCAGAGACCGCCCAAGAATTGCTCCAGGGGGCGTTCGAAGCCGTCTCGGGAGCACTTTC GGGGATACAGGAAAAAGTATTAGGAGCGTCGGCGGAGGGGGACCTGGGTCCCATCATCGGAATACTCGCGCGAGTGGCGC TGGTGTTCGTATGGGGATGGTTACTGGCGACACTGCTCAGCATCATCTGA
Upstream 100 bases:
>100_bases CCCCCGGAATGGATTTTCCGGCAATCCTGAGCTGGTGGCGGCCCCGCCCAGGGACTTTATAGACGTTTTGCAACCTCCGA GGCATTCGAGGGGGGTGAAC
Downstream 100 bases:
>100_bases AACGTGCTTAACAGACGATATGCGTGCGCCAAACCGCGAGACATGAGCACTTGAGACCCTCAAGCCTGCCGATATCCTGC GTACGAGTGAACTCCCGGAG
Product: membane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MFPRTLIPLISAILLATPACATDVGVFAWGSTIRSEGVQKFTDDILSTGYTEVAVLIRGVSTPTRVDTLSAVYSQIKARN PNVKVYAWIVGFERKDGWDKPWDPEVRREILDAVRSALPYCDGIILDDSFRYPTSNPVKREKAMQAITDLVREISELAHS HGKAVYFCLLPEKPEPYSIDRDAIATYVDKFIVEAYTEEYGRDDEWPVRVYNLYERLYPGKVAIALHELNESRLAHQLTL LKEAGCPDIWLFRYGEVKKMGLVRDVIRSITGSASGTSLQWSPVEGGQFDLAGLLLTGLVLGTFGGLVLAIVNPELLNSL GQAAIGIAETAQELLQGAFEAVSGALSGIQEKVLGASAEGDLGPIIGILARVALVFVWGWLLATLLSII
Sequences:
>Translated_389_residues MFPRTLIPLISAILLATPACATDVGVFAWGSTIRSEGVQKFTDDILSTGYTEVAVLIRGVSTPTRVDTLSAVYSQIKARN PNVKVYAWIVGFERKDGWDKPWDPEVRREILDAVRSALPYCDGIILDDSFRYPTSNPVKREKAMQAITDLVREISELAHS HGKAVYFCLLPEKPEPYSIDRDAIATYVDKFIVEAYTEEYGRDDEWPVRVYNLYERLYPGKVAIALHELNESRLAHQLTL LKEAGCPDIWLFRYGEVKKMGLVRDVIRSITGSASGTSLQWSPVEGGQFDLAGLLLTGLVLGTFGGLVLAIVNPELLNSL GQAAIGIAETAQELLQGAFEAVSGALSGIQEKVLGASAEGDLGPIIGILARVALVFVWGWLLATLLSII >Mature_389_residues MFPRTLIPLISAILLATPACATDVGVFAWGSTIRSEGVQKFTDDILSTGYTEVAVLIRGVSTPTRVDTLSAVYSQIKARN PNVKVYAWIVGFERKDGWDKPWDPEVRREILDAVRSALPYCDGIILDDSFRYPTSNPVKREKAMQAITDLVREISELAHS HGKAVYFCLLPEKPEPYSIDRDAIATYVDKFIVEAYTEEYGRDDEWPVRVYNLYERLYPGKVAIALHELNESRLAHQLTL LKEAGCPDIWLFRYGEVKKMGLVRDVIRSITGSASGTSLQWSPVEGGQFDLAGLLLTGLVLGTFGGLVLAIVNPELLNSL GQAAIGIAETAQELLQGAFEAVSGALSGIQEKVLGASAEGDLGPIIGILARVALVFVWGWLLATLLSII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42598; Mature: 42598
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPRTLIPLISAILLATPACATDVGVFAWGSTIRSEGVQKFTDDILSTGYTEVAVLIRGV CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC STPTRVDTLSAVYSQIKARNPNVKVYAWIVGFERKDGWDKPWDPEVRREILDAVRSALPY CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCH CDGIILDDSFRYPTSNPVKREKAMQAITDLVREISELAHSHGKAVYFCLLPEKPEPYSID HCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC RDAIATYVDKFIVEAYTEEYGRDDEWPVRVYNLYERLYPGKVAIALHELNESRLAHQLTL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH LKEAGCPDIWLFRYGEVKKMGLVRDVIRSITGSASGTSLQWSPVEGGQFDLAGLLLTGLV HHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHH LGTFGGLVLAIVNPELLNSLGQAAIGIAETAQELLQGAFEAVSGALSGIQEKVLGASAEG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DLGPIIGILARVALVFVWGWLLATLLSII CHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MFPRTLIPLISAILLATPACATDVGVFAWGSTIRSEGVQKFTDDILSTGYTEVAVLIRGV CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC STPTRVDTLSAVYSQIKARNPNVKVYAWIVGFERKDGWDKPWDPEVRREILDAVRSALPY CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCH CDGIILDDSFRYPTSNPVKREKAMQAITDLVREISELAHSHGKAVYFCLLPEKPEPYSID HCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC RDAIATYVDKFIVEAYTEEYGRDDEWPVRVYNLYERLYPGKVAIALHELNESRLAHQLTL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH LKEAGCPDIWLFRYGEVKKMGLVRDVIRSITGSASGTSLQWSPVEGGQFDLAGLLLTGLV HHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHH LGTFGGLVLAIVNPELLNSLGQAAIGIAETAQELLQGAFEAVSGALSGIQEKVLGASAEG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DLGPIIGILARVALVFVWGWLLATLLSII CHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA