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The map label for this gene is 20093750

Identifier: 20093750

GI number: 20093750

Start: 299623

End: 300867

Strand: Reverse

Name: 20093750

Synonym: MK0310

Alternate gene names: NA

Gene position: 300867-299623 (Counterclockwise)

Preceding gene: 20093751

Following gene: 20093749

Centisome position: 17.75

GC content: 69.96

Gene sequence:

>1245_bases
CTGTCGCCGACGAGCTCCTCCGGCTCGGCCTCCCCCTCGGCCCCCGACGCGAGACCGGACCGAGGGTTCCCGACGCCGTT
CACCGCGTCCCGACCCACCTCAAGGCCGCCTACCTCTCCGGTCTCTTCGACGCCCGGGCCTCCATCGCCGACAGCTCCCC
CGACCACGCCGCGCGTCACCCTGACGATGACCTCACCCGCCCGCCACCGGGACGGGCTCGCGGCCTTCATGCGGGACGTC
CTGGACCTCCTGGTGACCCTCGGGGTCCACGCCGTCGCCACCGGCCCCTCCGGACGCGAGTACCTCCGCACCCATCTCCA
TATCGACGGGGACACCCACGTCCACGGGTTCCTCACCGACGTCGGGTTCCCGTACCACACCCGCAAGCGGCGCGAGGCCC
ACCGTCTCGGGACCCGACTGGACCATCGGATCGAGCGACTCCGGGCCGAACCGGTCTCCGACCCGCCTGAACCCGTCCTC
CGGGATCCCGGGCTCCCGGACCGACAGGGGACCTACCTCCGACGCCGCGGTCTCCTCCCGATCGCGCTCGACGACCACAA
GATCCCGCTCCTCGCCCGCGTGCTCGGGTACGCCCTCGGCGACGGTAGCCTCCACGAGATCGACGGACAACTGCGGCTGA
CTTTCGCCGGCGAACCCGAGGGTCTCCGTGACCTCGCCGACGACCTCGCCACGCTCGGCGTCGGGACGGGTCTCAGACGG
TGGGACACGAAGGACATGGTCGAGCTCCACGTGCACTCGCGCGCCTTCGCCCGCTACCTGGAGCTCCTCGGGATGCCCCG
AAGCCCGAAGGTCGAGCGCGTCTACGGGGTACCCGGGTGGATCCTGCGCGCGCCTCCCGGCGTCAAGGCCGAGTTCCTCG
CCGGTCTCTTCGGGGCGGACGGATGGCTGACGGGGTCCGACGGTCGGTACGCGATCGGCCTGACCCAGGCGAAGTCGGCC
GTGTACCTGGGTTCCCTGCACCTCTTCATGACCGAGATCGGTGAGATGTTGGAGGAGGTCGCGGGCTGTAGATGGGGCCT
GAACCGGGAGCGGTGTTACACGACGGAGGACGGTAAGGTGAGGGTGACGGAACGCCTCTTCATCTGCGGTCGGGAGGACG
TGATGCGGTTCCTGAGCGACGTGGGGTTCGCCTACTCCCGGGCCAAGGCCGAGAGGACGGAGAGGGCGCTGAAGGCGCTC
GGAGGCTCCGTCCGGGGCATAAGACTCAAATACCGGGAGAAGTGA

Upstream 100 bases:

>100_bases
GCCGTGGACCCCGGAGCCCTCGAGGGACTACGACGGGACCTCCGCGCCCTGGACATCGCCCACCAGACGGAACCCCGAGC
CCTCAAGATCGACTCCAAGA

Downstream 100 bases:

>100_bases
CCTCAACTGTGGCGGGGACGGGCCCGCAGTTCAGCCCGGCAGAACGCCGGCCTGACGAGCCGGTGGTCCCGGGTTCAAAT
CCCGGCGGGCCCACTTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSPTSSSGSASPSAPDARPDRGFPTPFTASRPTSRPPTSPVSSTPGPPSPTAPPTTPRVTLTMTSPARHRDGLAAFMRDV
LDLLVTLGVHAVATGPSGREYLRTHLHIDGDTHVHGFLTDVGFPYHTRKRREAHRLGTRLDHRIERLRAEPVSDPPEPVL
RDPGLPDRQGTYLRRRGLLPIALDDHKIPLLARVLGYALGDGSLHEIDGQLRLTFAGEPEGLRDLADDLATLGVGTGLRR
WDTKDMVELHVHSRAFARYLELLGMPRSPKVERVYGVPGWILRAPPGVKAEFLAGLFGADGWLTGSDGRYAIGLTQAKSA
VYLGSLHLFMTEIGEMLEEVAGCRWGLNRERCYTTEDGKVRVTERLFICGREDVMRFLSDVGFAYSRAKAERTERALKAL
GGSVRGIRLKYREK

Sequences:

>Translated_414_residues
MSPTSSSGSASPSAPDARPDRGFPTPFTASRPTSRPPTSPVSSTPGPPSPTAPPTTPRVTLTMTSPARHRDGLAAFMRDV
LDLLVTLGVHAVATGPSGREYLRTHLHIDGDTHVHGFLTDVGFPYHTRKRREAHRLGTRLDHRIERLRAEPVSDPPEPVL
RDPGLPDRQGTYLRRRGLLPIALDDHKIPLLARVLGYALGDGSLHEIDGQLRLTFAGEPEGLRDLADDLATLGVGTGLRR
WDTKDMVELHVHSRAFARYLELLGMPRSPKVERVYGVPGWILRAPPGVKAEFLAGLFGADGWLTGSDGRYAIGLTQAKSA
VYLGSLHLFMTEIGEMLEEVAGCRWGLNRERCYTTEDGKVRVTERLFICGREDVMRFLSDVGFAYSRAKAERTERALKAL
GGSVRGIRLKYREK
>Mature_413_residues
SPTSSSGSASPSAPDARPDRGFPTPFTASRPTSRPPTSPVSSTPGPPSPTAPPTTPRVTLTMTSPARHRDGLAAFMRDVL
DLLVTLGVHAVATGPSGREYLRTHLHIDGDTHVHGFLTDVGFPYHTRKRREAHRLGTRLDHRIERLRAEPVSDPPEPVLR
DPGLPDRQGTYLRRRGLLPIALDDHKIPLLARVLGYALGDGSLHEIDGQLRLTFAGEPEGLRDLADDLATLGVGTGLRRW
DTKDMVELHVHSRAFARYLELLGMPRSPKVERVYGVPGWILRAPPGVKAEFLAGLFGADGWLTGSDGRYAIGLTQAKSAV
YLGSLHLFMTEIGEMLEEVAGCRWGLNRERCYTTEDGKVRVTERLFICGREDVMRFLSDVGFAYSRAKAERTERALKALG
GSVRGIRLKYREK

Specific function: Unknown

COG id: COG1372

COG function: function code L; Intein/homing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006142
- InterPro:   IPR004042
- InterPro:   IPR006141
- InterPro:   IPR001233 [H]

Pfam domain/function: PF01139 UPF0027 [H]

EC number: NA

Molecular weight: Translated: 45529; Mature: 45397

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50819 INTEIN_ENDONUCLEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTSSSGSASPSAPDARPDRGFPTPFTASRPTSRPPTSPVSSTPGPPSPTAPPTTPRVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
LTMTSPARHRDGLAAFMRDVLDLLVTLGVHAVATGPSGREYLRTHLHIDGDTHVHGFLTD
EEECCCCHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHEEECCCCCCEEEEHHH
VGFPYHTRKRREAHRLGTRLDHRIERLRAEPVSDPPEPVLRDPGLPDRQGTYLRRRGLLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCE
IALDDHKIPLLARVLGYALGDGSLHEIDGQLRLTFAGEPEGLRDLADDLATLGVGTGLRR
EEECCCCHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
WDTKDMVELHVHSRAFARYLELLGMPRSPKVERVYGVPGWILRAPPGVKAEFLAGLFGAD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHCCC
GWLTGSDGRYAIGLTQAKSAVYLGSLHLFMTEIGEMLEEVAGCRWGLNRERCYTTEDGKV
CEEECCCCEEEEEEHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCE
RVTERLFICGREDVMRFLSDVGFAYSRAKAERTERALKALGGSVRGIRLKYREK
EEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure 
SPTSSSGSASPSAPDARPDRGFPTPFTASRPTSRPPTSPVSSTPGPPSPTAPPTTPRVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
LTMTSPARHRDGLAAFMRDVLDLLVTLGVHAVATGPSGREYLRTHLHIDGDTHVHGFLTD
EEECCCCHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHEEECCCCCCEEEEHHH
VGFPYHTRKRREAHRLGTRLDHRIERLRAEPVSDPPEPVLRDPGLPDRQGTYLRRRGLLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCE
IALDDHKIPLLARVLGYALGDGSLHEIDGQLRLTFAGEPEGLRDLADDLATLGVGTGLRR
EEECCCCHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
WDTKDMVELHVHSRAFARYLELLGMPRSPKVERVYGVPGWILRAPPGVKAEFLAGLFGAD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHCCC
GWLTGSDGRYAIGLTQAKSAVYLGSLHLFMTEIGEMLEEVAGCRWGLNRERCYTTEDGKV
CEEECCCCEEEEEEHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCE
RVTERLFICGREDVMRFLSDVGFAYSRAKAERTERALKALGGSVRGIRLKYREK
EEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]