Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093744

Identifier: 20093744

GI number: 20093744

Start: 293608

End: 294210

Strand: Direct

Name: 20093744

Synonym: MK0304

Alternate gene names: NA

Gene position: 293608-294210 (Clockwise)

Preceding gene: 20093743

Following gene: 20093745

Centisome position: 17.32

GC content: 57.38

Gene sequence:

>603_bases
TTGGAGATCACTCATGGACGGCCGTACGACGAAGGTAGCGGTTGGCACGAGATCTTCATCGACCCAACCGGGCCCATGAT
GCACAAACCTTGGAAGATCCGGGACAGCGTGGTACTAGTACCGAAACACAAACCGATGAACGACGATGAGTACGCTTGTG
CGTCATCCCAGCGCCCGTACGACATGCTCAGTGAGGCCGTCCGCGACGCGATCTCACGGTTCGTTAGTCCGGAGACTATG
GAAAGGTTGAAAATCGCTTGGGACGGGCTTAAGGGATTGAGTATAGGGTTGATGATGGAGAGGTTCATCTACACGAACTT
CCTCACGGCGCAGGGTGTATCTAAGCTCATTGACAAGCTGTTCTTCGGCGGGAATCTTGAGTTCGAGATCGGGAACTGGT
TTGACAGAGTCCGCAGGTTCCCAGGATGGGACGCGAGTGAAGACGGCGTAGAACGACGGTGGCGTGCTTTCAAGAGCGAG
TGGGCGAGGTGGAGAGTCAAGGAGAGGGAGCCCAAGAAGAGCCCGACGATCTGGGTGATCATCCTAGCGGGCTCACTCGC
CCCGCTGGCTTGGTTCCGGGGCGCACGGGGGGTGATCCGGTGA

Upstream 100 bases:

>100_bases
CCGGATGAGGGTTGGGTGTGCACGGACCACGCAGTGCTCACGGTAGCCCTTTACCGGGCCGCGGGGATCCCGGGGTACGT
CGGCGGTGAACTCGAACCGT

Downstream 100 bases:

>100_bases
TCCTCCTCGTCCTCACCGCTCTCCTAACCCTCCCATACGACGTGACGGCCCCTTTTACCCGTGGAAGCACCGTGGGTGAT
GGATCCAGAGCTTTACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEITHGRPYDEGSGWHEIFIDPTGPMMHKPWKIRDSVVLVPKHKPMNDDEYACASSQRPYDMLSEAVRDAISRFVSPETM
ERLKIAWDGLKGLSIGLMMERFIYTNFLTAQGVSKLIDKLFFGGNLEFEIGNWFDRVRRFPGWDASEDGVERRWRAFKSE
WARWRVKEREPKKSPTIWVIILAGSLAPLAWFRGARGVIR

Sequences:

>Translated_200_residues
MEITHGRPYDEGSGWHEIFIDPTGPMMHKPWKIRDSVVLVPKHKPMNDDEYACASSQRPYDMLSEAVRDAISRFVSPETM
ERLKIAWDGLKGLSIGLMMERFIYTNFLTAQGVSKLIDKLFFGGNLEFEIGNWFDRVRRFPGWDASEDGVERRWRAFKSE
WARWRVKEREPKKSPTIWVIILAGSLAPLAWFRGARGVIR
>Mature_200_residues
MEITHGRPYDEGSGWHEIFIDPTGPMMHKPWKIRDSVVLVPKHKPMNDDEYACASSQRPYDMLSEAVRDAISRFVSPETM
ERLKIAWDGLKGLSIGLMMERFIYTNFLTAQGVSKLIDKLFFGGNLEFEIGNWFDRVRRFPGWDASEDGVERRWRAFKSE
WARWRVKEREPKKSPTIWVIILAGSLAPLAWFRGARGVIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23276; Mature: 23276

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITHGRPYDEGSGWHEIFIDPTGPMMHKPWKIRDSVVLVPKHKPMNDDEYACASSQRPY
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHCCCCCCH
DMLSEAVRDAISRFVSPETMERLKIAWDGLKGLSIGLMMERFIYTNFLTAQGVSKLIDKL
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGGNLEFEIGNWFDRVRRFPGWDASEDGVERRWRAFKSEWARWRVKEREPKKSPTIWVI
HCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
ILAGSLAPLAWFRGARGVIR
EECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEITHGRPYDEGSGWHEIFIDPTGPMMHKPWKIRDSVVLVPKHKPMNDDEYACASSQRPY
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHCCCCCCH
DMLSEAVRDAISRFVSPETMERLKIAWDGLKGLSIGLMMERFIYTNFLTAQGVSKLIDKL
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGGNLEFEIGNWFDRVRRFPGWDASEDGVERRWRAFKSEWARWRVKEREPKKSPTIWVI
HCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
ILAGSLAPLAWFRGARGVIR
EECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA