| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093724
Identifier: 20093724
GI number: 20093724
Start: 275404
End: 276174
Strand: Reverse
Name: 20093724
Synonym: MK0284
Alternate gene names: NA
Gene position: 276174-275404 (Counterclockwise)
Preceding gene: 20093725
Following gene: 20093721
Centisome position: 16.29
GC content: 59.14
Gene sequence:
>771_bases GTGTTCTTCGCCGGTACAGGCGGCGGACGTTTCGCTATGATCACTCAGAAACGCAGAACCGGAGGTTTTCGTCTCGAATT TCCCGACTTCCATCTCCACGTGGACCCAGGGCCCGGATGTCTCCTGAGTACCCGACTCTCCCGGCGACCCACCACGGCCG TCGACGCCGTGTTCGTCTCCCATTCACACCCCGATCACTACGCCGAAGCCGAGGTGCTCGTCGAGGCTATGACACGCGGC GGGACTAAACGTCGCGGCACGTTCGTGGGTTCCGTTTCCGCGGTGGAAGGGTATTCCGATGACTCCGGTGACTACGGTCC CGTCCTCAGCGCTTACCACCGAAGCTTACCGGAAGAAGTCGTGGCGCTCGAACCTGGCGACGAGATCGACCTACCGGCCG GAACACTCGAAGCGGTACCGACTACCCATGGGGATCCTACCGGCATCGGGTTCCGTCTCGAAACAGAGGACGACTCCATT TACTACACCGGAGACACGGAACTCCGTGAAGATTTTTTTGAGGTGATAGAGGACGTGACCGTCGCCATAGTCAACGTCGT GAGACCGGGATCAGACAGGATCAGAGGGCATCTTTGCACCTACGACGTGATAGAGCTAGTTTCGGAAGCACCCGAACTTC GGAAAGTTTTCATAACCCATTTCGGAATGAAGATGCTCAGGGTAGGCCCCGGGCGCGAAGCGAGACGTATTGAGCACGAG ACCGGCGTTGAGACCGTCGCTGCCCGGGACGGACGCGCCTACGATCTGTGA
Upstream 100 bases:
>100_bases AAGACGGGGTAATGAAGATAGATGGAAAGGACCTGCCCGTGATCACGGGGTACTCAATCTGCCGAACGAGACGTTGAACC GGTGGACGGACAACCCCACA
Downstream 100 bases:
>100_bases ACACCGTAGGTGGTGGCCGACGTATCGCGGACGTGCGGAGAGCCAGAGCCACGCGCTCAGAGTACGTGAAGCGCGACAAC TCCCTAATACCCTTAGAGGA
Product: beta-lactamase superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MFFAGTGGGRFAMITQKRRTGGFRLEFPDFHLHVDPGPGCLLSTRLSRRPTTAVDAVFVSHSHPDHYAEAEVLVEAMTRG GTKRRGTFVGSVSAVEGYSDDSGDYGPVLSAYHRSLPEEVVALEPGDEIDLPAGTLEAVPTTHGDPTGIGFRLETEDDSI YYTGDTELREDFFEVIEDVTVAIVNVVRPGSDRIRGHLCTYDVIELVSEAPELRKVFITHFGMKMLRVGPGREARRIEHE TGVETVAARDGRAYDL
Sequences:
>Translated_256_residues MFFAGTGGGRFAMITQKRRTGGFRLEFPDFHLHVDPGPGCLLSTRLSRRPTTAVDAVFVSHSHPDHYAEAEVLVEAMTRG GTKRRGTFVGSVSAVEGYSDDSGDYGPVLSAYHRSLPEEVVALEPGDEIDLPAGTLEAVPTTHGDPTGIGFRLETEDDSI YYTGDTELREDFFEVIEDVTVAIVNVVRPGSDRIRGHLCTYDVIELVSEAPELRKVFITHFGMKMLRVGPGREARRIEHE TGVETVAARDGRAYDL >Mature_256_residues MFFAGTGGGRFAMITQKRRTGGFRLEFPDFHLHVDPGPGCLLSTRLSRRPTTAVDAVFVSHSHPDHYAEAEVLVEAMTRG GTKRRGTFVGSVSAVEGYSDDSGDYGPVLSAYHRSLPEEVVALEPGDEIDLPAGTLEAVPTTHGDPTGIGFRLETEDDSI YYTGDTELREDFFEVIEDVTVAIVNVVRPGSDRIRGHLCTYDVIELVSEAPELRKVFITHFGMKMLRVGPGREARRIEHE TGVETVAARDGRAYDL
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28113; Mature: 28113
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFAGTGGGRFAMITQKRRTGGFRLEFPDFHLHVDPGPGCLLSTRLSRRPTTAVDAVFVS CEEECCCCCEEEEEEEECCCCCEEEECCCEEEEECCCCCEEEECCCCCCCCHHHHEEEEE HSHPDHYAEAEVLVEAMTRGGTKRRGTFVGSVSAVEGYSDDSGDYGPVLSAYHRSLPEEV CCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCCCCCCHHHHHHHHCCCCCE VALEPGDEIDLPAGTLEAVPTTHGDPTGIGFRLETEDDSIYYTGDTELREDFFEVIEDVT EEECCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHH VAIVNVVRPGSDRIRGHLCTYDVIELVSEAPELRKVFITHFGMKMLRVGPGREARRIEHE HHHHHHCCCCCHHHCEEECHHHHHHHHHCCHHHHHHHHHHHCHHEEECCCCCHHHHHHHH TGVETVAARDGRAYDL CCCCEEECCCCCCCCC >Mature Secondary Structure MFFAGTGGGRFAMITQKRRTGGFRLEFPDFHLHVDPGPGCLLSTRLSRRPTTAVDAVFVS CEEECCCCCEEEEEEEECCCCCEEEECCCEEEEECCCCCEEEECCCCCCCCHHHHEEEEE HSHPDHYAEAEVLVEAMTRGGTKRRGTFVGSVSAVEGYSDDSGDYGPVLSAYHRSLPEEV CCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCCCCCCHHHHHHHHCCCCCE VALEPGDEIDLPAGTLEAVPTTHGDPTGIGFRLETEDDSIYYTGDTELREDFFEVIEDVT EEECCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHH VAIVNVVRPGSDRIRGHLCTYDVIELVSEAPELRKVFITHFGMKMLRVGPGREARRIEHE HHHHHHCCCCCHHHCEEECHHHHHHHHHCCHHHHHHHHHHHCHHEEECCCCCHHHHHHHH TGVETVAARDGRAYDL CCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]