| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093713
Identifier: 20093713
GI number: 20093713
Start: 262262
End: 262552
Strand: Direct
Name: 20093713
Synonym: MK0273
Alternate gene names: NA
Gene position: 262262-262552 (Clockwise)
Preceding gene: 20093711
Following gene: 20093714
Centisome position: 15.47
GC content: 60.14
Gene sequence:
>291_bases TTGGAGTCACCGGTGAAAGAGCATCGGGAAGGAACGCTGATCCGAGTGCGGGTGAACCCGGACGCGGATACCACCGATCT GAAGGGGGTCGATGAGTGGCGTGGAGTCCTAGAAGTCGACGTGGCCGCGCCGCCGGTCAAGGGCAAAGCGAACCGCGAGC TGCTCGAGTTCCTCGGAAGGAAGCTCAACACGACCTGCGAATTGGTCTCGGGGGAGAAGTCCAGGGAGAAGTTAGTGCTC GCACGAGATGTCTCCGTCGATGAGGTGAAGGAACGGCTGGGATTGCGTTAA
Upstream 100 bases:
>100_bases CCCCGGTACGCATCGTCGGATCTGTGAAGACCGGCACTCGGGCTGAGGCCCGTGCACACTTCCCACATCCTTATTACCAT GTCTTCACGGGGGGCCGTAG
Downstream 100 bases:
>100_bases GCGTCACGAGAAGTAGTCGAGCGTACGCAAGGCGGCGACCGCGCGGAAATCTCCGAGACGGGTAACGACGCTCGGTGTGG GCCCGGGTTGAAGCGACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGRKLNTTCELVSGEKSREKLVL ARDVSVDEVKERLGLR
Sequences:
>Translated_96_residues MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGRKLNTTCELVSGEKSREKLVL ARDVSVDEVKERLGLR >Mature_96_residues MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGRKLNTTCELVSGEKSREKLVL ARDVSVDEVKERLGLR
Specific function: Unknown
COG id: COG1872
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0235 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y273_METKA (Q8TYM3)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613560.1 - ProteinModelPortal: Q8TYM3 - SMR: Q8TYM3 - GeneID: 1477576 - GenomeReviews: AE009439_GR - KEGG: mka:MK0273 - NMPDR: fig|190192.1.peg.273 - HOGENOM: HBG472132 - OMA: AKKNEIG - BioCyc: MKAN190192:MK0273-MONOMER - HAMAP: MF_00634 - InterPro: IPR005228 - InterPro: IPR003746 - Gene3D: G3DSA:3.30.1200.10 - TIGRFAMs: TIGR00251
Pfam domain/function: PF02594 DUF167; SSF69786 DUF167
EC number: NA
Molecular weight: Translated: 10764; Mature: 10764
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGR CCCCCCHHCCCCEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHH KLNTTCELVSGEKSREKLVLARDVSVDEVKERLGLR HCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGR CCCCCCHHCCCCEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHH KLNTTCELVSGEKSREKLVLARDVSVDEVKERLGLR HCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014