Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093713

Identifier: 20093713

GI number: 20093713

Start: 262262

End: 262552

Strand: Direct

Name: 20093713

Synonym: MK0273

Alternate gene names: NA

Gene position: 262262-262552 (Clockwise)

Preceding gene: 20093711

Following gene: 20093714

Centisome position: 15.47

GC content: 60.14

Gene sequence:

>291_bases
TTGGAGTCACCGGTGAAAGAGCATCGGGAAGGAACGCTGATCCGAGTGCGGGTGAACCCGGACGCGGATACCACCGATCT
GAAGGGGGTCGATGAGTGGCGTGGAGTCCTAGAAGTCGACGTGGCCGCGCCGCCGGTCAAGGGCAAAGCGAACCGCGAGC
TGCTCGAGTTCCTCGGAAGGAAGCTCAACACGACCTGCGAATTGGTCTCGGGGGAGAAGTCCAGGGAGAAGTTAGTGCTC
GCACGAGATGTCTCCGTCGATGAGGTGAAGGAACGGCTGGGATTGCGTTAA

Upstream 100 bases:

>100_bases
CCCCGGTACGCATCGTCGGATCTGTGAAGACCGGCACTCGGGCTGAGGCCCGTGCACACTTCCCACATCCTTATTACCAT
GTCTTCACGGGGGGCCGTAG

Downstream 100 bases:

>100_bases
GCGTCACGAGAAGTAGTCGAGCGTACGCAAGGCGGCGACCGCGCGGAAATCTCCGAGACGGGTAACGACGCTCGGTGTGG
GCCCGGGTTGAAGCGACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGRKLNTTCELVSGEKSREKLVL
ARDVSVDEVKERLGLR

Sequences:

>Translated_96_residues
MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGRKLNTTCELVSGEKSREKLVL
ARDVSVDEVKERLGLR
>Mature_96_residues
MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGRKLNTTCELVSGEKSREKLVL
ARDVSVDEVKERLGLR

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y273_METKA (Q8TYM3)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613560.1
- ProteinModelPortal:   Q8TYM3
- SMR:   Q8TYM3
- GeneID:   1477576
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0273
- NMPDR:   fig|190192.1.peg.273
- HOGENOM:   HBG472132
- OMA:   AKKNEIG
- BioCyc:   MKAN190192:MK0273-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10764; Mature: 10764

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGR
CCCCCCHHCCCCEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHH
KLNTTCELVSGEKSREKLVLARDVSVDEVKERLGLR
HCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGR
CCCCCCHHCCCCEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHH
KLNTTCELVSGEKSREKLVLARDVSVDEVKERLGLR
HCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014