Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20093690

Identifier: 20093690

GI number: 20093690

Start: 241089

End: 241838

Strand: Reverse

Name: 20093690

Synonym: MK0250

Alternate gene names: NA

Gene position: 241838-241089 (Counterclockwise)

Preceding gene: 20093694

Following gene: 20093689

Centisome position: 14.27

GC content: 57.07

Gene sequence:

>750_bases
ATGCGTGCTAGCGCCATCGCGACCCTCCTAGTAGCGATGGTAGTGATCCCGATAGCCTCAGCGGCGGAACTCCAGACGTC
GGCGACCACTGAAACGGCGCCTACAGCGACCGTCAAGCCGTCTGCAGGCGCAGATGCAGGCTCAGATGTGGGTGTCAGCG
TCGTCGGTGTACCGCTCACGATCGGAACGGATGAAACAAAGTCAACCTCCACGACGGGATCCGCCAACGTCACTACGACG
ATACCACCCGAGTACTACAGCTTGGCCAGCGGCTTGACGCAGTCGCTGTGTGACGCGTTGAGCAATGGTGTGGCTGCGGT
GATCGATTGCCTCCGCGGTCAAGCCTACCATGAGCCACGACCCGAGGACATAGTGTTCGCCGTAGTACTGTCAGCGGTCA
AGGCGGTAGTGAACCAGAAACTACACGAGGAATCCTTCCAGAAGCCGCTGAACGAGTTCCATCTGATGCTGGTCCAGTTC
ATCGGCCCGAACGCGACGTTGATGCAGCTACTGAGCGCGGTGACGGCGGAGCTTCAGGTGAACTTGAAGGAGGCGATCAA
ATCGTTCGGCCCGATAGCAATGTTATATGATCGTGTAGAAAATGCCCTTAAGAGCGCCAGTGGCAACGAGAAGAGCGCCT
ACGAGAGCGCCAAAAGCGAGCTGGACAACATGGTGAACAACCTGACCAAGTACGCCTCCGATATCTTCTGTATGCTACTC
TCGAAGTGTTTCCCCGGACTTCAGCTCTAA

Upstream 100 bases:

>100_bases
AGATCCGGGCCGGACGGTTCACCATCGCTACCCACCCCCGCCACCCGCTTCGTAGAGATTTTAAAACGGTAACGTGCCTG
TTACGCTCAGGGATGATCGT

Downstream 100 bases:

>100_bases
CGCCCTTGTGTCTCCCCTCCAATCTCCCCGATTTCCGCCTCCAATATCCCAACGCTTATAACTCGGACATCGTGTGACCG
GGCGTGGCCACAACGGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRASAIATLLVAMVVIPIASAAELQTSATTETAPTATVKPSAGADAGSDVGVSVVGVPLTIGTDETKSTSTTGSANVTTT
IPPEYYSLASGLTQSLCDALSNGVAAVIDCLRGQAYHEPRPEDIVFAVVLSAVKAVVNQKLHEESFQKPLNEFHLMLVQF
IGPNATLMQLLSAVTAELQVNLKEAIKSFGPIAMLYDRVENALKSASGNEKSAYESAKSELDNMVNNLTKYASDIFCMLL
SKCFPGLQL

Sequences:

>Translated_249_residues
MRASAIATLLVAMVVIPIASAAELQTSATTETAPTATVKPSAGADAGSDVGVSVVGVPLTIGTDETKSTSTTGSANVTTT
IPPEYYSLASGLTQSLCDALSNGVAAVIDCLRGQAYHEPRPEDIVFAVVLSAVKAVVNQKLHEESFQKPLNEFHLMLVQF
IGPNATLMQLLSAVTAELQVNLKEAIKSFGPIAMLYDRVENALKSASGNEKSAYESAKSELDNMVNNLTKYASDIFCMLL
SKCFPGLQL
>Mature_249_residues
MRASAIATLLVAMVVIPIASAAELQTSATTETAPTATVKPSAGADAGSDVGVSVVGVPLTIGTDETKSTSTTGSANVTTT
IPPEYYSLASGLTQSLCDALSNGVAAVIDCLRGQAYHEPRPEDIVFAVVLSAVKAVVNQKLHEESFQKPLNEFHLMLVQF
IGPNATLMQLLSAVTAELQVNLKEAIKSFGPIAMLYDRVENALKSASGNEKSAYESAKSELDNMVNNLTKYASDIFCMLL
SKCFPGLQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26187; Mature: 26187

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASAIATLLVAMVVIPIASAAELQTSATTETAPTATVKPSAGADAGSDVGVSVVGVPLT
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEE
IGTDETKSTSTTGSANVTTTIPPEYYSLASGLTQSLCDALSNGVAAVIDCLRGQAYHEPR
ECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PEDIVFAVVLSAVKAVVNQKLHEESFQKPLNEFHLMLVQFIGPNATLMQLLSAVTAELQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NLKEAIKSFGPIAMLYDRVENALKSASGNEKSAYESAKSELDNMVNNLTKYASDIFCMLL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKCFPGLQL
HHHCCCCCC
>Mature Secondary Structure
MRASAIATLLVAMVVIPIASAAELQTSATTETAPTATVKPSAGADAGSDVGVSVVGVPLT
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEE
IGTDETKSTSTTGSANVTTTIPPEYYSLASGLTQSLCDALSNGVAAVIDCLRGQAYHEPR
ECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PEDIVFAVVLSAVKAVVNQKLHEESFQKPLNEFHLMLVQFIGPNATLMQLLSAVTAELQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NLKEAIKSFGPIAMLYDRVENALKSASGNEKSAYESAKSELDNMVNNLTKYASDIFCMLL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKCFPGLQL
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA