| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093681
Identifier: 20093681
GI number: 20093681
Start: 229171
End: 230037
Strand: Reverse
Name: 20093681
Synonym: MK0241
Alternate gene names: NA
Gene position: 230037-229171 (Counterclockwise)
Preceding gene: 20093683
Following gene: 20093680
Centisome position: 13.57
GC content: 66.9
Gene sequence:
>867_bases GTGCACGCCATGTTGGTGGCACTCGTAGCGTCCGCACCTGCGACCCTCGCGGCGTGCGCGATCTTCAAGTTCCTGGACGG ACCGCTCTACGAGCCCGTTCGGGGAGGTACACCGAGGGGCGTCGGCGTCATCCCGGCCTTAATATACGCGTATCTGGCGC CCCTAACCCACGGCGTCCCGGTCGCGGCCCACGCCGTGCTGGGGTTCGTGGACGACGCGCTCGGCAGGACTCCCACGAGG TTCGGTGTCGAGGTGGGTCATCTGGCCCGGGGTACCGCGATGTTGGTGGCCTTCGGGTGGTGTTGGTGGAAGTTCCACCC TATCACGGGGCTCGTGGCGGGGTTCCTCCCACAACCCGCCAACATTGTGGACATGCAGCCGCGCGCGTTCACCTTCGCCG CGCTGACCGCCACCGTCGCGACCCTCCCATGGTGGAACCCGACCCTGGTCTCCGTCGCCTGGGCGGCGCTCATACCCTAC GTCCTGCTGGACCTGAAGGGTCGCGTGATGCTCGGGGACGCGGGGAACGCCTCGGTCGCGACGGCCCTCCTGCTCGCGTG CACGCGAGGGGACCCGATAGGGTCTATCGCTTTCCTGATCTCCTTCACCCTGGCCGGGGCGTTCTACCGGTTCAAGGTGG AACCCAGGCTTCGTGAGTACCTGGAGGAACGACTCGAGATCGAGGACCCAACGCTCATGGACGCCGTATGGGACGTACTC ACGGGAGGGGCGTTGGGGGACCTCATCAAGGCGAAGACCTTCGGCCGTACCGAAGTACCGGAGTGCGGTCGCTTGGCGCG GCTTCTAGGCTACCGCCGGCTCGTCCTCATCGGGCGCTCCACCGTCGGAGAACGAGTGCGGCGATGA
Upstream 100 bases:
>100_bases AGCGTGCTGATCAGGGCGTATTCCGTGAACATCGCCGCCAAGTTGCGCTCGAATCTTCCCATCTTGGGTGTCCTCCCGAG CCGACTGTGGGGGCTAGTCC
Downstream 100 bases:
>100_bases CCGGGCAGGGCTCACCCGCGCCCTCCCGCCGGCTGAACCCGCCTCTACGAGCCCGATCCGCGCCCGGGTGCCGTCGACCG TCCCCAGATCGTTTAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MHAMLVALVASAPATLAACAIFKFLDGPLYEPVRGGTPRGVGVIPALIYAYLAPLTHGVPVAAHAVLGFVDDALGRTPTR FGVEVGHLARGTAMLVAFGWCWWKFHPITGLVAGFLPQPANIVDMQPRAFTFAALTATVATLPWWNPTLVSVAWAALIPY VLLDLKGRVMLGDAGNASVATALLLACTRGDPIGSIAFLISFTLAGAFYRFKVEPRLREYLEERLEIEDPTLMDAVWDVL TGGALGDLIKAKTFGRTEVPECGRLARLLGYRRLVLIGRSTVGERVRR
Sequences:
>Translated_288_residues MHAMLVALVASAPATLAACAIFKFLDGPLYEPVRGGTPRGVGVIPALIYAYLAPLTHGVPVAAHAVLGFVDDALGRTPTR FGVEVGHLARGTAMLVAFGWCWWKFHPITGLVAGFLPQPANIVDMQPRAFTFAALTATVATLPWWNPTLVSVAWAALIPY VLLDLKGRVMLGDAGNASVATALLLACTRGDPIGSIAFLISFTLAGAFYRFKVEPRLREYLEERLEIEDPTLMDAVWDVL TGGALGDLIKAKTFGRTEVPECGRLARLLGYRRLVLIGRSTVGERVRR >Mature_288_residues MHAMLVALVASAPATLAACAIFKFLDGPLYEPVRGGTPRGVGVIPALIYAYLAPLTHGVPVAAHAVLGFVDDALGRTPTR FGVEVGHLARGTAMLVAFGWCWWKFHPITGLVAGFLPQPANIVDMQPRAFTFAALTATVATLPWWNPTLVSVAWAALIPY VLLDLKGRVMLGDAGNASVATALLLACTRGDPIGSIAFLISFTLAGAFYRFKVEPRLREYLEERLEIEDPTLMDAVWDVL TGGALGDLIKAKTFGRTEVPECGRLARLLGYRRLVLIGRSTVGERVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31022; Mature: 31022
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAMLVALVASAPATLAACAIFKFLDGPLYEPVRGGTPRGVGVIPALIYAYLAPLTHGVP CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC VAAHAVLGFVDDALGRTPTRFGVEVGHLARGTAMLVAFGWCWWKFHPITGLVAGFLPQPA HHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC NIVDMQPRAFTFAALTATVATLPWWNPTLVSVAWAALIPYVLLDLKGRVMLGDAGNASVA CEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH TALLLACTRGDPIGSIAFLISFTLAGAFYRFKVEPRLREYLEERLEIEDPTLMDAVWDVL HHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHH TGGALGDLIKAKTFGRTEVPECGRLARLLGYRRLVLIGRSTVGERVRR CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHCC >Mature Secondary Structure MHAMLVALVASAPATLAACAIFKFLDGPLYEPVRGGTPRGVGVIPALIYAYLAPLTHGVP CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC VAAHAVLGFVDDALGRTPTRFGVEVGHLARGTAMLVAFGWCWWKFHPITGLVAGFLPQPA HHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC NIVDMQPRAFTFAALTATVATLPWWNPTLVSVAWAALIPYVLLDLKGRVMLGDAGNASVA CEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH TALLLACTRGDPIGSIAFLISFTLAGAFYRFKVEPRLREYLEERLEIEDPTLMDAVWDVL HHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHH TGGALGDLIKAKTFGRTEVPECGRLARLLGYRRLVLIGRSTVGERVRR CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA